FFCP PHASE1:Hg19::chr16:3149278..3149305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84891 | |EntrezGene=84891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12997 | |HGNC=12997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002cty.1_5end | |association_with_transcript=0bp_to_uc002cty.1_5end | ||
|cluster_id=chr16:3149278..3149305,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_1_at_ZSCAN10_5end | |description=CAGE_peak_1_at_ZSCAN10_5end | ||
|id=chr16:3149278..3149305,- | |id=chr16:3149278..3149305,- | ||
|ontology_enrichment_celltype=CL:0002322!5.22e-46!5;CL:0000039!1.26e-21!7;CL:0000586!1.26e-21!7;CL:0000540!1.59e-14!6;CL:0000031!1.59e-14!6;CL:0000404!1.59e-14!6;CL:0000047!4.96e-11!8;CL:0000148!8.50e-09!10;CL:0000541!8.50e-09!10;CL:0000710!1.94e-07!20 | |ontology_enrichment_celltype=CL:0002322!5.22e-46!5;CL:0000039!1.26e-21!7;CL:0000586!1.26e-21!7;CL:0000540!1.59e-14!6;CL:0000031!1.59e-14!6;CL:0000404!1.59e-14!6;CL:0000047!4.96e-11!8;CL:0000148!8.50e-09!10;CL:0000541!8.50e-09!10;CL:0000710!1.94e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.40e-58;5!CL:0000039;1.63e-27;7!CL:0000586;1.63e-27;7!CL:0002321;1.33e-19;15!CL:0000540;2.33e-18;6!CL:0000404;2.33e-18;6!CL:0000148;4.31e-11;10!CL:0000147;4.48e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.32e-58,5;CL:0000039,1.69e-27,7;CL:0000586,1.69e-27,7;CL:0000540,2.33e-18,6;CL:0000031,2.33e-18,6;CL:0000404,2.33e-18,6;CL:0000047,6.30e-14,8;CL:0000148,4.31e-11,10;CL:0000541,4.31e-11,10;CL:0000147,4.48e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.69e-29;10!UBERON:0005564;1.69e-29;10!CL:0000031;2.33e-18;6 | |||
|ontology_enrichment_disease=DOID:3095!1.11e-14!22;DOID:2994!1.11e-14!22 | |ontology_enrichment_disease=DOID:3095!1.11e-14!22;DOID:2994!1.11e-14!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;6.42e-19;22!DOID:2994;6.42e-19;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.52e-19,22;DOID:2994,6.52e-19,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.87e-19!8;UBERON:0003135!7.50e-14!11;UBERON:0000991!6.04e-11!21;UBERON:0009196!6.04e-11!21;UBERON:0009117!6.04e-11!21;UBERON:0005564!6.04e-11!21;UBERON:0004176!1.93e-10!22;UBERON:0002135!3.61e-10!1;UBERON:0003101!5.34e-07!22;UBERON:0000079!5.34e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!5.87e-19!8;UBERON:0003135!7.50e-14!11;UBERON:0000991!6.04e-11!21;UBERON:0009196!6.04e-11!21;UBERON:0009117!6.04e-11!21;UBERON:0005564!6.04e-11!21;UBERON:0004176!1.93e-10!22;UBERON:0002135!3.61e-10!1;UBERON:0003101!5.34e-07!22;UBERON:0000079!5.34e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.02e-24;8!UBERON:0003135;1.23e-17;11!UBERON:0000991;4.66e-14;21!UBERON:0000922;9.23e-12;49!UBERON:0003101;6.16e-09;22!UBERON:0000079;6.16e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.14e-24,8;UBERON:0003135,1.26e-17,11;UBERON:0000991,4.72e-14,21;UBERON:0009196,4.72e-14,21;UBERON:0009117,4.72e-14,21;UBERON:0005564,4.72e-14,21;UBERON:0004176,2.07e-13,22;UBERON:0003101,6.22e-09,22;UBERON:0000079,6.22e-09,22 | |||
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|short_description=p1@ZSCAN10 | |short_description=p1@ZSCAN10 | ||
}} | }} |
Latest revision as of 12:54, 16 September 2015
Short description: | p1@ZSCAN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZSCAN10_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_uc002cty.1_5end |
EntrezGene: | ZSCAN10 |
HGNC: | 12997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.32e-58 | 5 |
germ line cell | 1.69e-27 | 7 |
germ cell | 1.69e-27 | 7 |
neuron | 2.33e-18 | 6 |
neuroblast | 2.33e-18 | 6 |
electrically signaling cell | 2.33e-18 | 6 |
neuronal stem cell | 6.30e-14 | 8 |
melanocyte | 4.31e-11 | 10 |
melanoblast | 4.31e-11 | 10 |
pigment cell | 4.48e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.14e-24 | 8 |
male reproductive organ | 1.26e-17 | 11 |
gonad | 4.72e-14 | 21 |
indifferent external genitalia | 4.72e-14 | 21 |
indifferent gonad | 4.72e-14 | 21 |
gonad primordium | 4.72e-14 | 21 |
external genitalia | 2.07e-13 | 22 |
male organism | 6.22e-09 | 22 |
male reproductive system | 6.22e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.52e-19 | 22 |
germ cell cancer | 6.52e-19 | 22 |