FFCP PHASE1:Hg19::chr16:3149266..3149277,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12997 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_uc002cty.1_5end | |||
|cluster_id=chr16:3149266..3149277,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_ZSCAN10_5end | |||
|id=chr16:3149266..3149277,- | |||
|ontology_enrichment_celltype=CL:0002322!1.39e-65!5;CL:0000039!4.52e-31!7;CL:0000586!4.52e-31!7;CL:0000540!1.25e-20!6;CL:0000031!1.25e-20!6;CL:0000404!1.25e-20!6;CL:0000047!1.21e-15!8;CL:0000148!1.62e-12!10;CL:0000541!1.62e-12!10;CL:0000147!4.19e-09!14;CL:0000133!1.54e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.95e-70;5!CL:0000039;3.77e-33;7!CL:0000586;3.77e-33;7!CL:0002321;1.58e-23;15!CL:0000540;6.23e-22;6!CL:0000404;6.23e-22;6!CL:0000148;2.30e-13;10!CL:0000147;1.03e-09;14!CL:0000710;5.86e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.90e-70,5;CL:0000039,3.62e-33,7;CL:0000586,3.62e-33,7;CL:0000540,5.40e-22,6;CL:0000031,5.40e-22,6;CL:0000404,5.40e-22,6;CL:0000047,1.14e-16,8;CL:0000148,2.45e-13,10;CL:0000541,2.45e-13,10;CL:0000147,1.07e-09,14;CL:0000133,4.14e-08,59;CL:0000710,6.04e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-35;10!UBERON:0005564;1.10e-35;10!CL:0000031;6.23e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!3.35e-15!22;DOID:2994!3.35e-15!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.75e-16;22!DOID:2994;2.75e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.94e-16,22;DOID:2994,2.94e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.05e-27!8;UBERON:0003135!6.41e-20!11;UBERON:0000991!6.34e-16!21;UBERON:0009196!6.34e-16!21;UBERON:0009117!6.34e-16!21;UBERON:0005564!6.34e-16!21;UBERON:0004176!3.35e-15!22;UBERON:0003101!4.20e-10!22;UBERON:0000079!4.20e-10!22;UBERON:0002323!3.06e-07!46;UBERON:0003133!6.19e-07!48;UBERON:0004458!8.62e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.58e-29;8!UBERON:0003135;2.97e-21;11!UBERON:0000991;4.65e-17;21!UBERON:0000922;2.96e-14;49!UBERON:0003101;8.72e-11;22!UBERON:0000079;8.72e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.42e-29,8;UBERON:0003135,2.89e-21,11;UBERON:0000991,4.97e-17,21;UBERON:0009196,4.97e-17,21;UBERON:0009117,4.97e-17,21;UBERON:0005564,4.97e-17,21;UBERON:0004176,2.94e-16,22;UBERON:0003101,8.61e-11,22;UBERON:0000079,8.61e-11,22;UBERON:0002323,9.15e-08,46;UBERON:0003133,1.94e-07,48;UBERON:0004458,2.77e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,1.45782745153634,1.39432731443422,1.65857688024593,5.04641701751257,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,1.92555211236127,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13549782351571,0,0,6.32330744400287,5.61156551057677,2.29737248837112,2.75778293221613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ZSCAN10 | |||
}} |
Latest revision as of 12:53, 16 September 2015
Short description: | p2@ZSCAN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZSCAN10_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 15bp_to_uc002cty.1_5end |
EntrezGene: | ZSCAN10 |
HGNC: | 12997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.90e-70 | 5 |
germ line cell | 3.62e-33 | 7 |
germ cell | 3.62e-33 | 7 |
neuron | 5.40e-22 | 6 |
neuroblast | 5.40e-22 | 6 |
electrically signaling cell | 5.40e-22 | 6 |
neuronal stem cell | 1.14e-16 | 8 |
melanocyte | 2.45e-13 | 10 |
melanoblast | 2.45e-13 | 10 |
pigment cell | 1.07e-09 | 14 |
neurectodermal cell | 4.14e-08 | 59 |
neurecto-epithelial cell | 6.04e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 4.42e-29 | 8 |
male reproductive organ | 2.89e-21 | 11 |
gonad | 4.97e-17 | 21 |
indifferent external genitalia | 4.97e-17 | 21 |
indifferent gonad | 4.97e-17 | 21 |
gonad primordium | 4.97e-17 | 21 |
external genitalia | 2.94e-16 | 22 |
male organism | 8.61e-11 | 22 |
male reproductive system | 8.61e-11 | 22 |
body cavity | 9.15e-08 | 46 |
reproductive organ | 1.94e-07 | 48 |
body cavity or lining | 2.77e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.94e-16 | 22 |
germ cell cancer | 2.94e-16 | 22 |