FFCP PHASE1:Hg19::chr5:155753936..155753977,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:155753936..155753977,+ to FFCP PHASE1:Hg19::chr5:155753936..155753977,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6444 | |EntrezGene=6444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10807 | |HGNC=10807 | ||
|TSSclassifier=strong | |||
|UniProt=E5RI34 | |UniProt=E5RI34 | ||
|association_with_transcript=0bp_to_ENST00000524347_5end | |||
|cluster_id=chr5:155753936..155753977,+ | |||
|description=CAGE_peak_3_at_SGCD_5end | |||
|id=chr5:155753936..155753977,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.24e-08!180;CL:0000057!2.64e-07!75;CL:0002620!7.77e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.35e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-36!115;UBERON:0000955!1.30e-16!69;UBERON:0006238!1.30e-16!69;UBERON:0001049!1.81e-16!57;UBERON:0005068!1.81e-16!57;UBERON:0006241!1.81e-16!57;UBERON:0007135!1.81e-16!57;UBERON:0000475!3.01e-16!365;UBERON:0001017!6.34e-16!82;UBERON:0005743!3.46e-15!86;UBERON:0002616!6.55e-15!59;UBERON:0000153!6.75e-15!129;UBERON:0007811!6.75e-15!129;UBERON:0000033!2.76e-14!123;UBERON:0000073!3.46e-14!94;UBERON:0001016!3.46e-14!94;UBERON:0003075!1.69e-12!86;UBERON:0007284!1.69e-12!86;UBERON:0002346!2.42e-12!90;UBERON:0002780!2.51e-12!41;UBERON:0001890!2.51e-12!41;UBERON:0006240!2.51e-12!41;UBERON:0000924!3.93e-12!173;UBERON:0006601!3.93e-12!173;UBERON:0004121!4.13e-12!169;UBERON:0003080!9.60e-12!42;UBERON:0002020!1.55e-10!34;UBERON:0003528!1.55e-10!34;UBERON:0001893!1.99e-10!34;UBERON:0002791!5.74e-10!33;UBERON:0001869!4.41e-09!32;UBERON:0000062!7.45e-09!511;UBERON:0003056!2.06e-08!61;UBERON:0003102!3.13e-08!95;UBERON:0000481!6.44e-08!347;UBERON:0002619!9.85e-08!22;UBERON:0000468!2.05e-07!659;UBERON:0001950!5.48e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.89e-09;41!UBERON:0001890;1.89e-09;41!UBERON:0003528;3.59e-09;34!UBERON:0002020;3.59e-09;34!UBERON:0001893;3.59e-09;34!UBERON:0000073;6.20e-09;53!UBERON:0002616;6.20e-09;53!UBERON:0007023;6.32e-09;114!UBERON:0001869;1.98e-08;32!UBERON:0002791;2.01e-08;32!UBERON:0001134;4.59e-08;16!UBERON:0002036;4.59e-08;16!UBERON:0002298;6.77e-08;6!UBERON:0000125;1.98e-07;9!UBERON:0002308;1.98e-07;9!UBERON:0002619;2.79e-07;22!UBERON:0001950;3.69e-07;20!UBERON:0001016;5.97e-07;83!UBERON:0001017;7.49e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.12e-33,114;UBERON:0001049,2.40e-17,56;UBERON:0005068,2.40e-17,56;UBERON:0006241,2.40e-17,56;UBERON:0007135,2.40e-17,56;UBERON:0001017,5.18e-15,81;UBERON:0003075,5.23e-15,82;UBERON:0007284,5.23e-15,82;UBERON:0000955,6.23e-15,68;UBERON:0006238,6.23e-15,68;UBERON:0000073,7.86e-15,53;UBERON:0002616,7.86e-15,53;UBERON:0002346,1.98e-14,86;UBERON:0001016,3.28e-14,89;UBERON:0010371,8.49e-14,104;UBERON:0004121,1.96e-13,171;UBERON:0000924,1.96e-13,171;UBERON:0006601,1.96e-13,171;UBERON:0010314,5.73e-12,132;UBERON:0002780,5.76e-12,41;UBERON:0001890,5.76e-12,41;UBERON:0003080,5.76e-12,41;UBERON:0006240,5.76e-12,41;UBERON:0003528,6.80e-11,34;UBERON:0002020,6.80e-11,34;UBERON:0001893,9.24e-11,34;UBERON:0002791,2.50e-09,32;UBERON:0003056,2.54e-09,61;UBERON:0001869,4.56e-09,32;UBERON:0011216,9.50e-09,223;UBERON:0002298,6.55e-08,6;UBERON:0000125,2.23e-07,9;UBERON:0002308,2.23e-07,9;UBERON:0002619,2.60e-07,22;UBERON:0001950,3.74e-07,20;UBERON:0003102,8.71e-07,99;UBERON:0003076,8.72e-07,15;UBERON:0003057,8.72e-07,15 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.986680828671798,0,0,0,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,0.495065411840187,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.869079113764942,2.3858578411533,0.973269740605272,0,0,0.087834785693126,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.647491777472526,0.702254033511242,0.61246251376468,0.61417158655884,1.34323515528495,3.56400857184616,4.20353779773547,0,0,1.5150250255866,0.875829639103749,0.277064115484183,0.438977620880838,1.5324389789951,2.85452311922534,0.226864366320042,2.15267562826634,5.12537733164562,4.23863802319124,1.20036438433761,2.16410311400722,2.83404594050192,3.35010341396862,1.18143432568886,1.55899208257918,2.77677151668526,3.03764665519588,2.42469085228218,6.03516307278244,3.52632343796741,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,0,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,15.3664904187049,0,5.86087236050235,0,2.77634230298973,3.60411669412701,0.285826432630578,0.112131084345361,0,0.1466765716419,1.80980402060889,0,0,2.6593811658487,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,3.61953266668948,1.43833425785268,7.34149949283572,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,1.50473049863859,4.5481500811197,0,1.32845119707087,1.10621501125022,0.173767228936166,0,0,0,0,0,0,0,0,1.48864684691266,0.920771839728375,0.280660094433074,1.02511319404561,0.511707249066704,1.12597744800525,0,0.616838775210622,0,0.410635780069046,0,0,0,0,0,4.01850568576124,1.27463817604702,1.83574180943194,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,3.47963966309705,8.2509499920588,0,0,0,5.80024309752732,0.616194468458578,1.38153307253517,1.65403886981437,0.966782203814463,0.870100163485371,0.852266274161009,7.30062692303246,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,1.86079184679834,0.949138274156178,0,0,1.71175595213568,0,0,0.359744915166629,1.64722217841633,2.00281083987667,0,0,0,0,0,0,0.409499734223957,0.989838023675989,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,2.96365403663912,0,1.39973888097993,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,1.61158997199083,0,0.111443384277478,0,0,0,0,0.994147647766298,2.67271891179974,0,0,0,0.996239941255349,1.93398740871803,0,0,0,6.53183134089796,0,0,0,2.56472854656027,0,0,0.969332746095218,2.69027484669369,1.99613798001194,0,0,0,0,0,0,0,0,3.64612489359914,3.54296554325536,1.20596438625408,1.52581736317083,0.663475559587348,0.295547618953547,1.09692698576986,0,0,4.69396576873162,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,1.50377859655677,1.83309043480088,0,0,0,7.07711896297109,3.21031058919516,2.10838001152805,0,0,0,0.394584402849391,2.41981432097328,0.30607276163049,1.39010475182674,0,0,0,0,0,0,0,0.138674673013139,0,0,0,3.4945333648406,0.687944129886466,0,0,0,1.84279131327997,0,4.06765333404958,0.137041924646751,0,2.089256266544,0,0,1.92107695265417,0,0,0,0,0,0,0,1.22313785466253,1.35983700206033,0,0.866851769704557,2.40168115483916,4.24406674565178,0,0.859530882839914,0,6.42349522926185,4.58320848023367,0,4.3929380109778,6.86761677018513,4.24025769139558,9.13695225819477,0,0,0,0,0,0,0,0.795229689809303,2.86027152834309,0,0,0,0,0,1.45798935979259,0,0.236417121897595,1.57363764404994,0,0,0,5.71756261098694,3.97255182219259,0,0,0.864221491201268,2.93928624098468,0,0,2.55582032678133,0,0.293104467356165,0,5.68845007990822,4.76037366273684,0.513260513652988,0,1.06787412567695,6.13096789888697,0.828478110694391,0,0.395223263795889,0,0,6.52821364043369,1.2534494701135,6.12691153526923,3.93447156851765,0,1.77213635993397,1.83039397352945,2.253436752717,3.44045517414043,7.65410455604281,6.33383310002111,2.35192679391592,0,5.76266646658262,5.99477200444432,0,0,0,0.74627401443437,2.33713309847224,0,1.13641803165053,1.25783950876288,4.44905610798268,0.228840068396924,0.604923695052956,0.621748802331122,0,0.63718706865481,0,0,1.24411862352257,1.32920857278997,1.56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| ||
|short_description=p3@SGCD | |||
}} | }} |
Latest revision as of 12:46, 16 September 2015
Short description: | p3@SGCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SGCD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524347_5end |
EntrezGene: | SGCD |
HGNC: | 10807 |
UniProt: | E5RI34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data