FFCP PHASE1:Hg19::chr10:116164431..116164441,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25901 | |||
|TSSclassifier=strong | |||
|UniProt=F6QUH3,Q8N4X5 | |||
|association_with_transcript=73bp_to_ENST00000369271,ENST00000541919,NM_001001936,NM_032550,uc001lbn.2,uc001lbo.2,uc001lbp.2,uc001lbr.1,uc010qse.1_5end | |||
|cluster_id=chr10:116164431..116164441,- | |||
|description=CAGE_peak_9_at_AFAP1L2_5end | |||
|id=chr10:116164431..116164441,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.84e-12;5!UBERON:0004872;4.95e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-31!115;UBERON:0001049!5.93e-14!57;UBERON:0005068!5.93e-14!57;UBERON:0006241!5.93e-14!57;UBERON:0007135!5.93e-14!57;UBERON:0001017!5.94e-13!82;UBERON:0005743!5.98e-13!86;UBERON:0003075!1.86e-12!86;UBERON:0007284!1.86e-12!86;UBERON:0004121!4.35e-12!169;UBERON:0000153!1.37e-11!129;UBERON:0007811!1.37e-11!129;UBERON:0000924!1.79e-11!173;UBERON:0006601!1.79e-11!173;UBERON:0002346!1.83e-11!90;UBERON:0000073!8.56e-11!94;UBERON:0001016!8.56e-11!94;UBERON:0001893!9.63e-11!34;UBERON:0002780!2.09e-10!41;UBERON:0001890!2.09e-10!41;UBERON:0006240!2.09e-10!41;UBERON:0000922!4.72e-10!612;UBERON:0003080!5.00e-10!42;UBERON:0002791!7.08e-10!33;UBERON:0000033!8.82e-10!123;UBERON:0000062!9.60e-10!511;UBERON:0002616!1.02e-09!59;UBERON:0000955!1.08e-09!69;UBERON:0006238!1.08e-09!69;UBERON:0002619!1.73e-09!22;UBERON:0002050!2.04e-09!605;UBERON:0005423!2.04e-09!605;UBERON:0002020!3.12e-09!34;UBERON:0003528!3.12e-09!34;UBERON:0001950!4.38e-09!20;UBERON:0000467!4.55e-09!625;UBERON:0000468!4.61e-09!659;UBERON:0000480!5.30e-09!626;UBERON:0000923!6.39e-09!604;UBERON:0005291!6.39e-09!604;UBERON:0006598!6.39e-09!604;UBERON:0002532!6.39e-09!604;UBERON:0001869!8.24e-09!32;UBERON:0000956!5.59e-08!25;UBERON:0000203!5.59e-08!25;UBERON:0003056!1.23e-07!61;UBERON:0000064!1.24e-07!219;UBERON:0000477!1.95e-07!286;UBERON:0000481!5.07e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.65e-20;3!UBERON:0002135;1.78e-15;1!UBERON:0002426;1.78e-15;1!UBERON:0003831;1.78e-15;1!UBERON:0003898;1.78e-15;1!UBERON:0004830;1.78e-15;1!UBERON:0003830;1.78e-15;1!UBERON:0005175;1.78e-15;1!UBERON:0001774;1.78e-15;1!UBERON:0001103;1.78e-15;1!UBERON:0002046;1.84e-12;5!UBERON:0004177;2.82e-12;5!UBERON:0005057;2.82e-12;5!UBERON:0000922;6.88e-09;49!UBERON:0000341;1.39e-08;2!UBERON:0005090;2.15e-08;2!UBERON:0001630;2.15e-08;2!UBERON:0002133;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.67e-20,3;UBERON:0004854,8.67e-20,3;UBERON:0009034,8.67e-20,3;UBERON:0002095,8.67e-20,3;UBERON:0004782,8.67e-20,3;UBERON:0003281,8.67e-20,3;UBERON:0009664,8.67e-20,3;UBERON:0002296,8.67e-20,3;UBERON:0005602,8.67e-20,3;UBERON:0001179,8.67e-20,3;UBERON:0006293,8.67e-20,3;UBERON:0002426,1.54e-15,1;UBERON:0003831,1.54e-15,1;UBERON:0003898,1.54e-15,1;UBERON:0004830,1.54e-15,1;UBERON:0003830,1.54e-15,1;UBERON:0005175,1.54e-15,1;UBERON:0001774,1.54e-15,1;UBERON:0001103,1.54e-15,1;UBERON:0010084,1.54e-15,1;UBERON:0002135,2.06e-15,1;UBERON:0002046,1.59e-12,5;UBERON:0004117,1.59e-12,5;UBERON:0007689,1.59e-12,5;UBERON:0007123,1.59e-12,5;UBERON:0003091,1.59e-12,5;UBERON:0004177,4.95e-09,7;UBERON:0005057,4.95e-09,7;UBERON:0000341,1.39e-08,2;UBERON:0005090,2.00e-08,2;UBERON:0001630,2.00e-08,2;UBERON:0002133,2.31e-08,2;UBERON:0000945,5.18e-08,8;UBERON:0010039,5.18e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26672954583968,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.741383633679017,1.04421949505455,0.606610196826093,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.694238953340524,0.685946781900644,0.261177619741208,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.39641200636127,0.458320848023367,0,0,0,0,0.268733889946905,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.408610218334727,0.160753148465019,0,0,0.2249738915515,0,0.607495566580247,0,0.157611414598396,0.629455057619977,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.478901577171454,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0.687034029507179,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0.337687923091973,0.781078098613847,0,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.339848664884159,0.263091094251396,0,0,0.156986185701028,0,0,1.82631744101899,0,0,0.857718530119876,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0.588925401344836,0.594092800654172,1.6906229103336,0,1.03382309777839,1.93373663920732,0,0,0.705789743431384,0,0.730336388246517,0,0.860037498908708,0,0.611923411718232,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,2.61870874610114,0.258355639344024,0.0620747142958579,0,1.71847327351045,3.23387502333151,0.217716747896961,0.342233301085281,0.0673520530145875,0.286888821570705,0.99798106963804,0.162806537221949,0,0,0,0,0.855690109280065,0.813792356631477,0,0.201273793591026,0.320568492303233 | |||
|short_description=p9@AFAP1L2 | |||
}} |
Latest revision as of 12:37, 16 September 2015
Short description: | p9@AFAP1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AFAP1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000369271, ENST00000541919, NM_001001936, NM_032550, uc001lbn.2, uc001lbo.2, uc001lbp.2, uc001lbr.1, uc010qse.1_5end |
EntrezGene: | AFAP1L2 |
HGNC: | 25901 |
UniProt: | F6QUH3Q8N4X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 8.67e-20 | 3 |
gastrointestinal system mesentery | 8.67e-20 | 3 |
stomach region | 8.67e-20 | 3 |
mesentery | 8.67e-20 | 3 |
gastrointestinal system serosa | 8.67e-20 | 3 |
mesentery of stomach | 8.67e-20 | 3 |
gut mesentery | 8.67e-20 | 3 |
dorsal mesentery | 8.67e-20 | 3 |
dorsal mesogastrium | 8.67e-20 | 3 |
peritoneal cavity | 8.67e-20 | 3 |
spleen primordium | 8.67e-20 | 3 |
chest muscle | 1.54e-15 | 1 |
respiratory system muscle | 1.54e-15 | 1 |
skeletal muscle of trunk | 1.54e-15 | 1 |
respiratory system skeletal muscle | 1.54e-15 | 1 |
thoracic segment muscle | 1.54e-15 | 1 |
chest organ | 1.54e-15 | 1 |
muscle of trunk | 1.54e-15 | 1 |
diaphragm | 1.54e-15 | 1 |
future diaphragm | 1.54e-15 | 1 |
mitral valve | 2.06e-15 | 1 |
thyroid gland | 1.59e-12 | 5 |
pharyngeal pouch | 1.59e-12 | 5 |
thyroid diverticulum | 1.59e-12 | 5 |
pharyngeal pouch 2 | 1.59e-12 | 5 |
thyroid primordium | 1.59e-12 | 5 |
hemopoietic organ | 4.95e-09 | 7 |
immune organ | 4.95e-09 | 7 |
throat | 1.39e-08 | 2 |
muscle structure | 2.00e-08 | 2 |
muscle organ | 2.00e-08 | 2 |
atrioventricular valve | 2.31e-08 | 2 |
stomach | 5.18e-08 | 8 |
food storage organ | 5.18e-08 | 8 |