FFCP PHASE1:Hg19::chrX:78619044..78619053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9452 | |EntrezGene=9452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6173 | |HGNC=6173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462038_5end | |association_with_transcript=0bp_to_ENST00000462038_5end | ||
|cluster_id=chrX:78619044..78619053,- | |||
|coexpression_cluster_id=C2962 | |||
|description=CAGE_peak_10_at_ITM2A_5end | |description=CAGE_peak_10_at_ITM2A_5end | ||
|id=chrX:78619044..78619053,- | |id=chrX:78619044..78619053,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.61e-34;1!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002081!5.22e-09!2;UBERON:0002360!7.90e-08!2;UBERON:0000094!7.90e-08!2;UBERON:0007645!7.90e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;3.96e-66;2!UBERON:0004151;1.53e-44;3!UBERON:0002079;3.61e-34;1!UBERON:0002134;7.06e-34;1!UBERON:0005208;7.06e-34;1!UBERON:0004145;7.06e-34;1!UBERON:0005946;7.06e-34;1!UBERON:0005965;7.06e-34;1!UBERON:0002078;7.06e-34;1!UBERON:0003127;1.07e-17;2!UBERON:0002133;1.07e-17;2!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0002114;2.89e-12;2!UBERON:0002346;1.12e-09;4!UBERON:0000923;1.12e-09;4!UBERON:0010316;1.12e-09;4!UBERON:0005291;1.12e-09;4!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5!UBERON:0002108;7.01e-08;4!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,3.96e-66,2;UBERON:0010227,3.96e-66,2;UBERON:0004151,1.53e-44,3;UBERON:0002079,3.61e-34,1;UBERON:0002134,7.06e-34,1;UBERON:0005208,7.06e-34,1;UBERON:0005946,7.06e-34,1;UBERON:0005965,7.06e-34,1;UBERON:0002078,7.06e-34,1;UBERON:0002133,1.07e-17,2;UBERON:0003127,1.27e-17,2;UBERON:0002114,2.59e-12,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0004145,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0002108,6.55e-08,4 | |||
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| ||
|short_description=p10@ITM2A | |short_description=p10@ITM2A | ||
}} | }} |
Latest revision as of 12:13, 16 September 2015
Short description: | p10@ITM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITM2A_5end |
Coexpression cluster: | C2962_neuroectodermal_chronic_diaphragm_left_acute_trachea_temporal |
Association with transcript: | 0bp_to_ENST00000462038_5end |
EntrezGene: | ITM2A |
HGNC: | 6173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 3.96e-66 | 2 |
future cardiac atrium | 3.96e-66 | 2 |
cardiac chamber | 1.53e-44 | 3 |
left cardiac atrium | 3.61e-34 | 1 |
tricuspid valve | 7.06e-34 | 1 |
right atrium valve | 7.06e-34 | 1 |
outflow tract of atrium | 7.06e-34 | 1 |
outflow part of right atrium | 7.06e-34 | 1 |
right cardiac atrium | 7.06e-34 | 1 |
atrioventricular valve | 1.07e-17 | 2 |
open tracheal system trachea | 1.27e-17 | 2 |
duodenum | 2.59e-12 | 2 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
outflow tract | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
small intestine | 6.55e-08 | 4 |