FFCP PHASE1:Hg19::chr10:115438979..115438998,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:115438979..115438998,+ to FFCP PHASE1:Hg19::chr10:115438979..115438998,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=840 | |EntrezGene=840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1508 | |HGNC=1508 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000369331_5end | |||
|cluster_id=chr10:115438979..115438998,+ | |||
|description=CAGE_peak_4_at_CASP7_5end | |||
|id=chr10:115438979..115438998,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.53e-12!24;CL:0002078!1.80e-10!44;CL:0000115!2.56e-10!35;CL:0000071!1.42e-09!18;CL:0002546!1.42e-09!18;CL:0000213!4.29e-07!57;CL:0000215!4.29e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.22e-16;24!CL:0000115;3.36e-13;36!CL:0000071;1.35e-12;18!CL:0002078;1.85e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.56e-16,24;CL:0000115,1.71e-14,36;CL:0002078,1.55e-13,45;CL:0000071,2.75e-12,18;CL:0002546,2.75e-12,18;CL:0000213,3.45e-09,58;CL:0000215,3.45e-09,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.35e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.42e-09!18;UBERON:0004638!1.42e-09!18;UBERON:0004852!1.42e-09!18;UBERON:0000055!1.02e-08!69;UBERON:0006914!1.12e-08!25;UBERON:0000487!2.05e-08!22;UBERON:0002049!2.77e-08!79;UBERON:0007798!2.77e-08!79;UBERON:0000477!2.80e-08!286;UBERON:0001981!2.02e-07!60;UBERON:0007500!2.02e-07!60;UBERON:0004537!2.02e-07!60;UBERON:0006965!2.02e-07!60;UBERON:0004872!2.72e-07!84;UBERON:0004111!3.51e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.35e-12;18!UBERON:0001986;1.35e-12;18!UBERON:0004852;1.35e-12;18!UBERON:0000487;1.48e-10;22!UBERON:0006914;2.15e-10;25!UBERON:0001638;4.75e-07;9!UBERON:0003920;4.75e-07;9!UBERON:0004582;4.75e-07;9!UBERON:0000490;5.57e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.75e-12,18;UBERON:0001986,2.75e-12,18;UBERON:0004852,2.75e-12,18;UBERON:0000055,9.85e-12,68;UBERON:0002049,2.59e-10,78;UBERON:0007798,2.59e-10,78;UBERON:0000487,2.75e-10,22;UBERON:0006914,2.88e-10,25;UBERON:0007500,4.19e-10,59;UBERON:0001981,4.19e-10,59;UBERON:0004537,4.19e-10,59;UBERON:0006965,4.19e-10,59;UBERON:0004872,4.45e-09,83;UBERON:0004111,5.89e-07,240;UBERON:0004535,6.12e-07,109;UBERON:0001009,7.72e-07,112 | |||
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| ||
|short_description=p4@CASP7 | |||
}} | }} |
Latest revision as of 11:59, 16 September 2015
Short description: | p4@CASP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CASP7_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000369331_5end |
EntrezGene: | CASP7 |
HGNC: | 1508 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.56e-16 | 24 |
endothelial cell | 1.71e-14 | 36 |
meso-epithelial cell | 1.55e-13 | 45 |
blood vessel endothelial cell | 2.75e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.75e-12 | 18 |
lining cell | 3.45e-09 | 58 |
barrier cell | 3.45e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.75e-12 | 18 |
endothelium | 2.75e-12 | 18 |
cardiovascular system endothelium | 2.75e-12 | 18 |
vessel | 9.85e-12 | 68 |
vasculature | 2.59e-10 | 78 |
vascular system | 2.59e-10 | 78 |
simple squamous epithelium | 2.75e-10 | 22 |
squamous epithelium | 2.88e-10 | 25 |
epithelial tube open at both ends | 4.19e-10 | 59 |
blood vessel | 4.19e-10 | 59 |
blood vasculature | 4.19e-10 | 59 |
vascular cord | 4.19e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 4.45e-09 | 83 |
anatomical conduit | 5.89e-07 | 240 |
cardiovascular system | 6.12e-07 | 109 |
circulatory system | 7.72e-07 | 112 |