FFCP PHASE1:Hg19::chr12:113416240..113416251,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:113416240..113416251,+
|short_description=p5@OAS2
|description=CAGE_peak_5_at_OAS2_5end
|association_with_transcript=-22bp_to_NM_001032731,NM_002535,NM_01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4939 | |EntrezGene=4939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8087 | |HGNC=8087 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PJ33,Q7Z6D0,P29728 | |UniProt=Q6PJ33,Q7Z6D0,P29728 | ||
|association_with_transcript=-22bp_to_NM_001032731,NM_002535,NM_016817,uc001tuh.2,uc001tui.1,uc001tuj.2_5end | |||
|cluster_id=chr12:113416240..113416251,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_5_at_OAS2_5end | |||
|id=chr12:113416240..113416251,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.28e-36!119;CL:0000738!8.57e-31!140;CL:0002031!1.79e-30!124;CL:0000542!3.94e-23!53;CL:0000051!3.94e-23!53;CL:0000838!1.11e-22!52;CL:0000037!1.48e-21!172;CL:0000566!1.48e-21!172;CL:0002032!3.24e-20!165;CL:0000837!3.24e-20!165;CL:0000988!2.83e-18!182;CL:0002057!2.24e-15!42;CL:0002194!3.53e-13!63;CL:0000576!3.53e-13!63;CL:0000040!3.53e-13!63;CL:0000559!3.53e-13!63;CL:0000860!4.05e-13!45;CL:0000945!1.01e-12!24;CL:0000826!1.01e-12!24;CL:0002009!1.37e-12!65;CL:0000839!1.53e-10!70;CL:0000557!1.62e-10!71;CL:0000084!4.59e-10!25;CL:0000827!4.59e-10!25;CL:0000791!6.64e-10!18;CL:0000789!6.64e-10!18;CL:0002420!6.64e-10!18;CL:0002419!6.64e-10!18;CL:0000790!6.64e-10!18;CL:0000766!1.00e-09!76;CL:0000625!2.95e-07!11;CL:0000236!6.11e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.68e-20;24!CL:0000542;8.18e-19;53!CL:0002087;9.25e-17;104!CL:0000860;6.70e-15;33!CL:0002057;6.70e-15;33!CL:0000473;2.11e-13;39!CL:0000234;2.11e-13;39!CL:0000576;3.86e-13;48!CL:0000084;2.80e-11;25!CL:0000791;1.21e-10;18!CL:0000789;1.21e-10;18!CL:0002419;1.21e-10;18!CL:0000738;2.06e-09;136!CL:0000236;2.41e-09;13!CL:0000625;2.17e-08;11!CL:0000766;4.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.07e-51,115;CL:0002031,1.27e-42,120;CL:0000738,3.95e-41,136;CL:0000542,2.03e-31,53;CL:0000051,2.03e-31,53;CL:0000037,8.80e-31,168;CL:0000838,1.16e-30,52;CL:0002032,9.50e-29,161;CL:0000837,9.50e-29,161;CL:0000988,8.23e-28,177;CL:0000473,3.20e-21,48;CL:0000234,3.20e-21,48;CL:0000945,2.07e-20,24;CL:0000826,2.07e-20,24;CL:0000860,5.00e-20,42;CL:0002057,5.00e-20,42;CL:0002194,6.96e-18,59;CL:0000576,6.96e-18,59;CL:0000040,6.96e-18,59;CL:0000559,6.96e-18,59;CL:0002009,6.53e-17,61;CL:0000839,9.37e-15,66;CL:0000557,2.30e-14,67;CL:0000766,1.95e-13,72;CL:0000084,2.57e-11,25;CL:0000827,2.57e-11,25;CL:0000791,1.20e-10,18;CL:0000789,1.20e-10,18;CL:0002420,1.20e-10,18;CL:0002419,1.20e-10,18;CL:0000790,1.20e-10,18;CL:0000236,1.72e-10,14;CL:0000134,2.82e-09,354;CL:0002320,1.31e-08,361;CL:0000625,1.75e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;8.18e-19;53!CL:0002057;2.12e-13;42!CL:0000790;1.21e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.42e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.38e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.98e-15!112;UBERON:0002390!1.08e-14!102;UBERON:0003061!1.08e-14!102;UBERON:0002371!1.01e-10!80;UBERON:0004765!4.67e-09!101;UBERON:0001434!4.67e-09!101;UBERON:0001474!1.63e-08!86;UBERON:0002405!3.31e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-22,98;UBERON:0003061,1.25e-22,98;UBERON:0002193,7.08e-21,108;UBERON:0002405,8.97e-18,93;UBERON:0002371,5.50e-15,76;UBERON:0001474,5.48e-13,82;UBERON:0001434,1.02e-12,100;UBERON:0004765,1.66e-12,90;UBERON:0003081,3.06e-08,203;UBERON:0002384,4.84e-08,371;UBERON:0004177,1.82e-07,7;UBERON:0005057,1.82e-07,7 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48851376329922,5.41863890369642,7.08397031823113,0.393364276848904,1.53531759238885,0.309632246632152,1.83884244895785,0.90361775633475,0,6.04244164526353,2.27470771979874,1.46800219667424,1.10799081706375,0,0.868043482863407,3.35873211359887,1.29557466407592,1.28787783817093,0.436194716338694,0,0.970336244751265,0.232429036905685,0.822335776043652,0.929119112685311,8.63077176966451,5.63553554364021,6.14853797710322,2.75796544589295,1.29096936716765,0,0,1.09162460023138,0.449446968890169,10.1007684482398,2.24650318953266,7.67204550958849,4.61791820261403,6.78176435913548,6.81959600852311,18.2831820336008,6.80862269629368,12.4564449799115,5.27622197039161,3.12889751052121,4.56096573880745,18.1619850790011,11.4166067156145,15.5066569846033,1.69004229049553,2.76385589954557,1.25795187305026,2.13424399178341,1.65194582125657,1.44653028027372,4.27519115611873,1.9891667719909,2.19196984517561,5.27988733383968,5.46138611262132,2.66852776159066,5.54749289336459,6.80673177961221,5.74752439954483,5.2883589822789,2.86216126360609,1.1384259382189,0,0.382273228125229,1.32171328579026,2.24203425192614,0.790152254325231,1.180258620683,0.786021525498329,0.822405995998037,8.02495177875255,3.91106719960308,2.8406868344084,1.94826728407911,7.46450061130663,5.00830042707223,7.75368631042674,6.49929273036037,7.55738786381483,7.02320476823343,6.9063919933544,4.14525026678773,8.11448640058147,2.96573126324121,3.47803076516627,4.18142095219907,5.55215779218074,2.68254345521345,5.15441168223945,3.79529538029254,7.64556994377832,2.60433381542567,11.4054245333805,5.87242964403314,5.24745105733115,4.99722906209383,5.20909954496837,6.56902397536837,1.41124720257313,0.802320587350522,0.868946423296794,2.43806866313962,0,0.255725123687061,1.0843174571537,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0,0,0.654895377488563,0.364295288292542,1.48313777113772,0.97364218096405,0.522389211897802,0.398873881556595,0.715471872916026,1.71598473234038,0.371457501329565,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.835979866147242,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.625098097988558,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,10.6920257155385,2.71993622206413,0,0,0,0,1.10825646193673,1.31693286264251,0.30648779579902,2.40380894250555,0,0,0,0.211931901159562,0.600182192168805,0.309157587715317,0.515281080091258,0,0.168776332241266,0,0,0,0.484938170456436,0,0,0,2.51239109112286,3.54569956768085,3.15485054927904,0,0,0,0,0,0,4.69348596989448,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,1.10581869652794,1.29623823221941,1.62904152655162,0,0,0,0,0.721832238805369,2.31492756288305,0.570762456703795,0,0,1.96973604869918,1.17002132569619,0.445893486866185,0.93733833986777,3.35964256397719,5.81277898693785,0.268675568108545,0.871901815541886,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,0.112131084345361,0,0,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.977208552881205,0,0,0.301439377059586,0,0,1.2162378064119,2.51128545716063,0,0,0,0,0.579125226670317,0,0.537182889719687,2.01753259188349,3.15249216323084,0.862510299438069,2.31017465303547,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.07857100409308,1.49418580924822,0,0,0,0,0,0,0.256278298511402,0,0,0,0.462629081407967,0,0.492762936082855,3.11552657510173,0.929683027679674,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,2.29706215198469,0.650060246036521,3.21367859688319,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0,0,0,0,23.7185856735588,0.532306030317022,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0,21.9342140668156,0,0,0,2.26016233240486,0,0.66343897524122,2.19225442626881,0,0,0,0,0,0,0,0,0,1.47775344708365,0.329294892959902,0,0,1.05844323998063,0,0,0.659006605437454,1.72202149068492,0,0,1.37834040124176,4.56702848308952,2.29391162142713,1.13929437434833,2.1440859791201,4.93634727703433,3.8908398671563,0.540031437238115,0,0,0,2.45040215981032,2.04383492638291,2.01976898167023,0,0.956557636372934,0,0.191505370132367,0.635020748171649,0.324621940274555,0.561594356226918,2.05411211129873,0,0,1.18504244461122,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0,0,0,0.748562161632879,0.73254089635947,0,1.78309414843965,0,0,0,0,0,0.1406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| ||
|short_description=p5@OAS2 | |||
}} | }} |
Latest revision as of 11:50, 16 September 2015
Short description: | p5@OAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OAS2_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | -22bp_to_NM_001032731, NM_002535, NM_016817, uc001tuh.2, uc001tui.1, uc001tuj.2_5end |
EntrezGene: | OAS2 |
HGNC: | 8087 |
UniProt: | Q6PJ33Q7Z6D0P29728 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-22 | 98 |
blood island | 1.25e-22 | 98 |
hemolymphoid system | 7.08e-21 | 108 |
immune system | 8.97e-18 | 93 |
bone marrow | 5.50e-15 | 76 |
bone element | 5.48e-13 | 82 |
skeletal system | 1.02e-12 | 100 |
skeletal element | 1.66e-12 | 90 |
lateral plate mesoderm | 3.06e-08 | 203 |
connective tissue | 4.84e-08 | 371 |
hemopoietic organ | 1.82e-07 | 7 |
immune organ | 1.82e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.38e-07 | 10 |