FFCP PHASE1:Hg19::chr2:242755144..242755205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129807 | |EntrezGene=129807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21328 | |HGNC=21328 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEA3 | |UniProt=C9JEA3 | ||
|association_with_transcript=-8bp_to_ENST00000428592_5end | |association_with_transcript=-8bp_to_ENST00000428592_5end | ||
|cluster_id=chr2:242755144..242755205,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_NEU4_5end | |description=CAGE_peak_1_at_NEU4_5end | ||
|id=chr2:242755144..242755205,+ | |id=chr2:242755144..242755205,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.17e-57!42;CL:0000860!5.09e-52!45;CL:0000766!1.18e-50!76;CL:0000738!8.41e-47!140;CL:0000557!2.22e-46!71;CL:0000839!3.02e-45!70;CL:0002009!1.50e-43!65;CL:0002194!2.35e-43!63;CL:0000576!2.35e-43!63;CL:0000040!2.35e-43!63;CL:0000559!2.35e-43!63;CL:0000037!7.63e-42!172;CL:0000566!7.63e-42!172;CL:0000988!2.80e-39!182;CL:0002031!3.12e-39!124;CL:0002087!8.39e-39!119;CL:0000763!1.66e-37!112;CL:0000049!1.66e-37!112;CL:0002032!1.76e-36!165;CL:0000837!1.76e-36!165;CL:0002393!1.30e-09!9;CL:0002397!1.30e-09!9;CL:0000134!2.89e-09!358;CL:0002320!1.14e-08!365;CL:0000219!2.12e-07!390 | |ontology_enrichment_celltype=CL:0002057!7.17e-57!42;CL:0000860!5.09e-52!45;CL:0000766!1.18e-50!76;CL:0000738!8.41e-47!140;CL:0000557!2.22e-46!71;CL:0000839!3.02e-45!70;CL:0002009!1.50e-43!65;CL:0002194!2.35e-43!63;CL:0000576!2.35e-43!63;CL:0000040!2.35e-43!63;CL:0000559!2.35e-43!63;CL:0000037!7.63e-42!172;CL:0000566!7.63e-42!172;CL:0000988!2.80e-39!182;CL:0002031!3.12e-39!124;CL:0002087!8.39e-39!119;CL:0000763!1.66e-37!112;CL:0000049!1.66e-37!112;CL:0002032!1.76e-36!165;CL:0000837!1.76e-36!165;CL:0002393!1.30e-09!9;CL:0002397!1.30e-09!9;CL:0000134!2.89e-09!358;CL:0002320!1.14e-08!365;CL:0000219!2.12e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-76;33!CL:0002057;2.44e-76;33!CL:0000473;1.26e-54;39!CL:0000234;1.26e-54;39!CL:0000576;3.62e-46;48!CL:0000766;7.26e-35;69!CL:0000763;1.35e-16;100!CL:0002087;2.36e-15;104!CL:0000738;1.15e-11;136!CL:0000767;1.40e-09;3!CL:0000784;2.72e-09;3!CL:0000094;5.45e-09;8!CL:0002393;2.34e-08;6!CL:0002397;2.34e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.26e-85,42;CL:0002057,2.26e-85,42;CL:0000766,4.92e-80,72;CL:0000473,1.30e-77,48;CL:0000234,1.30e-77,48;CL:0000839,3.33e-69,66;CL:0000557,5.05e-68,67;CL:0002194,2.75e-67,59;CL:0000576,2.75e-67,59;CL:0000040,2.75e-67,59;CL:0000559,2.75e-67,59;CL:0002009,8.89e-65,61;CL:0000738,3.81e-58,136;CL:0000763,1.16e-49,108;CL:0000049,1.16e-49,108;CL:0000037,1.41e-46,168;CL:0002087,8.04e-46,115;CL:0002031,1.61e-45,120;CL:0000988,1.51e-43,177;CL:0002032,1.42e-39,161;CL:0000837,1.42e-39,161;CL:0000134,3.54e-15,354;CL:0002320,1.26e-14,361;CL:0000219,1.80e-13,386;CL:0000034,1.13e-11,441;CL:0000048,2.47e-10,427;CL:0000723,5.22e-10,433;CL:0000767,1.30e-09,3;CL:0000784,2.28e-09,3;CL:0000094,5.26e-09,8;CL:0002393,2.83e-08,9;CL:0002397,2.83e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-61;42!CL:0000049;2.32e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.77e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.88e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.70e-41!102;UBERON:0003061!3.70e-41!102;UBERON:0002371!4.73e-41!80;UBERON:0001474!6.44e-37!86;UBERON:0002193!1.23e-35!112;UBERON:0002405!4.73e-30!115;UBERON:0004765!5.54e-30!101;UBERON:0001434!5.54e-30!101;UBERON:0002204!4.12e-14!167;UBERON:0003081!1.63e-13!216;UBERON:0002384!9.52e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!3.70e-41!102;UBERON:0003061!3.70e-41!102;UBERON:0002371!4.73e-41!80;UBERON:0001474!6.44e-37!86;UBERON:0002193!1.23e-35!112;UBERON:0002405!4.73e-30!115;UBERON:0004765!5.54e-30!101;UBERON:0001434!5.54e-30!101;UBERON:0002204!4.12e-14!167;UBERON:0003081!1.63e-13!216;UBERON:0002384!9.52e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.96e-11;4!UBERON:0000923;1.96e-11;4!UBERON:0010316;1.96e-11;4!UBERON:0005291;1.96e-11;4!UBERON:0002050;3.65e-09;5!UBERON:0005423;3.65e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.35e-62,76;UBERON:0001474,1.23e-56,82;UBERON:0002390,4.26e-53,98;UBERON:0003061,4.26e-53,98;UBERON:0002405,3.16e-51,93;UBERON:0004765,1.14e-50,90;UBERON:0002193,3.77e-47,108;UBERON:0001434,1.52e-44,100;UBERON:0002204,2.22e-22,167;UBERON:0003081,8.23e-20,203;UBERON:0002384,1.06e-14,371;UBERON:0000926,6.66e-09,315;UBERON:0004120,6.66e-09,315;UBERON:0006603,6.66e-09,315 | |||
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|short_description=p1@NEU4 | |short_description=p1@NEU4 | ||
}} | }} |
Latest revision as of 11:40, 16 September 2015
Short description: | p1@NEU4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEU4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -8bp_to_ENST00000428592_5end |
EntrezGene: | NEU4 |
HGNC: | 21328 |
UniProt: | C9JEA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.35e-62 | 76 |
bone element | 1.23e-56 | 82 |
hematopoietic system | 4.26e-53 | 98 |
blood island | 4.26e-53 | 98 |
immune system | 3.16e-51 | 93 |
skeletal element | 1.14e-50 | 90 |
hemolymphoid system | 3.77e-47 | 108 |
skeletal system | 1.52e-44 | 100 |
musculoskeletal system | 2.22e-22 | 167 |
lateral plate mesoderm | 8.23e-20 | 203 |
connective tissue | 1.06e-14 | 371 |
mesoderm | 6.66e-09 | 315 |
mesoderm-derived structure | 6.66e-09 | 315 |
presumptive mesoderm | 6.66e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.88e-07 | 10 |