FFCP PHASE1:Hg19::chr17:56591978..56592056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9110 | |EntrezGene=9110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7452 | |HGNC=7452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010dcx.1_5end | |association_with_transcript=0bp_to_uc010dcx.1_5end | ||
|cluster_id=chr17:56591978..56592056,- | |||
|description=CAGE_peak_2_at_MTMR4_5end | |description=CAGE_peak_2_at_MTMR4_5end | ||
|id=chr17:56591978..56592056,- | |id=chr17:56591978..56592056,- | ||
|ontology_enrichment_celltype=CL:0002319!2.73e-07!25;CL:0000095!4.60e-07!17;CL:0000123!4.60e-07!17 | |ontology_enrichment_celltype=CL:0002319!2.73e-07!25;CL:0000095!4.60e-07!17;CL:0000123!4.60e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.92e-07;25!CL:0000095;5.44e-07;17 | |ontology_enrichment_celltype_v019=CL:0002319;3.92e-07;25!CL:0000095;5.44e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.45e-07,25;CL:0000095,4.14e-07,17;CL:0000123,4.14e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.31e-20!235;DOID:14566!2.61e-20!239;DOID:0050686!5.13e-15!137;DOID:0050687!9.50e-10!143;DOID:2531!1.10e-08!51;DOID:0060083!1.10e-08!51 | |ontology_enrichment_disease=DOID:162!1.31e-20!235;DOID:14566!2.61e-20!239;DOID:0050686!5.13e-15!137;DOID:0050687!9.50e-10!143;DOID:2531!1.10e-08!51;DOID:0060083!1.10e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.90e-20,235;DOID:14566,5.07e-20,239;DOID:0050686,9.72e-15,137;DOID:0050687,1.47e-09,143;DOID:2531,9.62e-09,51;DOID:0060083,9.62e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000924!3.25e-08!173;UBERON:0006601!3.25e-08!173;UBERON:0000073!8.98e-08!94;UBERON:0001016!8.98e-08!94;UBERON:0004121!1.12e-07!169;UBERON:0000955!3.06e-07!69;UBERON:0006238!3.06e-07!69;UBERON:0000033!7.17e-07!123;UBERON:0000064!7.91e-07!219;UBERON:0001017!8.14e-07!82 | |ontology_enrichment_uberon=UBERON:0000924!3.25e-08!173;UBERON:0006601!3.25e-08!173;UBERON:0000073!8.98e-08!94;UBERON:0001016!8.98e-08!94;UBERON:0004121!1.12e-07!169;UBERON:0000955!3.06e-07!69;UBERON:0006238!3.06e-07!69;UBERON:0000033!7.17e-07!123;UBERON:0000064!7.91e-07!219;UBERON:0001017!8.14e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-08,89;UBERON:0000955,1.44e-07,68;UBERON:0006238,1.44e-07,68;UBERON:0004121,2.23e-07,171;UBERON:0000924,2.23e-07,171;UBERON:0006601,2.23e-07,171;UBERON:0001017,6.04e-07,81 | |||
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| ||
|short_description=p2@MTMR4 | |short_description=p2@MTMR4 | ||
}} | }} |
Latest revision as of 11:38, 16 September 2015
Short description: | p2@MTMR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTMR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010dcx.1_5end |
EntrezGene: | MTMR4 |
HGNC: | 7452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.45e-07 | 25 |
neuron associated cell | 4.14e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.14e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-08 | 89 |
brain | 1.44e-07 | 68 |
future brain | 1.44e-07 | 68 |
ectoderm-derived structure | 2.23e-07 | 171 |
ectoderm | 2.23e-07 | 171 |
presumptive ectoderm | 2.23e-07 | 171 |
central nervous system | 6.04e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.90e-20 | 235 |
disease of cellular proliferation | 5.07e-20 | 239 |
organ system cancer | 9.72e-15 | 137 |
cell type cancer | 1.47e-09 | 143 |
hematologic cancer | 9.62e-09 | 51 |
immune system cancer | 9.62e-09 | 51 |