FFCP PHASE1:Hg19::chr17:56358092..56358104,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56358092..56358104,-
|short_description=p2@MPO
|description=CAGE_peak_2_at_MPO_5end
|association_with_transcript=14bp_to_HQ258645,S56200_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4353 | |EntrezGene=4353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7218 | |HGNC=7218 | ||
|TSSclassifier=strong | |||
|UniProt=P05164 | |UniProt=P05164 | ||
|association_with_transcript=14bp_to_HQ258645,S56200_5end | |||
|cluster_id=chr17:56358092..56358104,- | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_2_at_MPO_5end | |||
|id=chr17:56358092..56358104,- | |||
|ontology_enrichment_celltype=CL:0000764!2.16e-07!2;CL:0000765!2.16e-07!2;CL:0000050!2.16e-07!2;CL:0000038!2.16e-07!2;CL:0000558!2.16e-07!2;CL:0000547!2.16e-07!2;CL:0000549!2.16e-07!2;CL:0000550!2.16e-07!2;CL:0000552!2.16e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.90e-08;1!CL:0000557;2.90e-08;1!CL:0000037;3.34e-08;1!CL:0001024;3.34e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.34e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.69e-09;7!UBERON:0004140;4.11e-08;1!UBERON:0010226;4.40e-08;1!UBERON:0010227;9.61e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!1.60e-10!31;DOID:1240!6.98e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.16e-09;31!DOID:225;1.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.38e-10,31;DOID:225,1.91e-08,1;DOID:1240,7.75e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-11!115;UBERON:0002771!3.20e-09!3;UBERON:0004177!7.01e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.49e-21;5!UBERON:0005057;1.49e-21;5!UBERON:0002370;2.21e-14;2!UBERON:0005058;2.21e-14;2!UBERON:0009113;2.21e-14;2!UBERON:0002106;8.03e-10;3!UBERON:0004151;1.00e-09;3!UBERON:0002405;1.78e-08;27!UBERON:0002084;4.40e-08;1!UBERON:0002082;4.40e-08;1!UBERON:0002426;6.19e-08;1!UBERON:0003831;6.19e-08;1!UBERON:0003898;6.19e-08;1!UBERON:0004830;6.19e-08;1!UBERON:0003830;6.19e-08;1!UBERON:0005175;6.19e-08;1!UBERON:0001774;6.19e-08;1!UBERON:0001103;6.19e-08;1!UBERON:0007029;9.61e-08;1!UBERON:0002079;9.61e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.18e-15,7;UBERON:0005057,2.18e-15,7;UBERON:0002106,8.97e-10,3;UBERON:0004854,8.97e-10,3;UBERON:0009034,8.97e-10,3;UBERON:0002095,8.97e-10,3;UBERON:0004782,8.97e-10,3;UBERON:0003281,8.97e-10,3;UBERON:0009664,8.97e-10,3;UBERON:0002296,8.97e-10,3;UBERON:0005602,8.97e-10,3;UBERON:0001179,8.97e-10,3;UBERON:0006293,8.97e-10,3;UBERON:0004151,9.38e-10,3;UBERON:0002084,4.40e-08,1;UBERON:0002082,4.40e-08,1;UBERON:0010226,4.40e-08,1;UBERON:0002426,6.63e-08,1;UBERON:0003831,6.63e-08,1;UBERON:0003898,6.63e-08,1;UBERON:0004830,6.63e-08,1;UBERON:0003830,6.63e-08,1;UBERON:0005175,6.63e-08,1;UBERON:0001774,6.63e-08,1;UBERON:0001103,6.63e-08,1;UBERON:0010084,6.63e-08,1;UBERON:0007029,8.12e-08,1;UBERON:0002079,8.69e-08,1;UBERON:0002370,1.35e-07,4;UBERON:0005058,1.35e-07,4;UBERON:0009113,1.35e-07,4;UBERON:0003295,1.35e-07,4;UBERON:0005562,1.35e-07,4 | |||
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| ||
|short_description=p2@MPO | |||
}} | }} |
Latest revision as of 10:44, 16 September 2015
Short description: | p2@MPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MPO_5end |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | 14bp_to_HQ258645, S56200_5end |
EntrezGene: | MPO |
HGNC: | 7218 |
UniProt: | P05164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.34e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.18e-15 | 7 |
immune organ | 2.18e-15 | 7 |
spleen | 8.97e-10 | 3 |
gastrointestinal system mesentery | 8.97e-10 | 3 |
stomach region | 8.97e-10 | 3 |
mesentery | 8.97e-10 | 3 |
gastrointestinal system serosa | 8.97e-10 | 3 |
mesentery of stomach | 8.97e-10 | 3 |
gut mesentery | 8.97e-10 | 3 |
dorsal mesentery | 8.97e-10 | 3 |
dorsal mesogastrium | 8.97e-10 | 3 |
peritoneal cavity | 8.97e-10 | 3 |
spleen primordium | 8.97e-10 | 3 |
cardiac chamber | 9.38e-10 | 3 |
heart left ventricle | 4.40e-08 | 1 |
cardiac ventricle | 4.40e-08 | 1 |
future cardiac ventricle | 4.40e-08 | 1 |
chest muscle | 6.63e-08 | 1 |
respiratory system muscle | 6.63e-08 | 1 |
skeletal muscle of trunk | 6.63e-08 | 1 |
respiratory system skeletal muscle | 6.63e-08 | 1 |
thoracic segment muscle | 6.63e-08 | 1 |
chest organ | 6.63e-08 | 1 |
muscle of trunk | 6.63e-08 | 1 |
diaphragm | 6.63e-08 | 1 |
future diaphragm | 6.63e-08 | 1 |
surface | 8.12e-08 | 1 |
left cardiac atrium | 8.69e-08 | 1 |
thymus | 1.35e-07 | 4 |
hemolymphoid system gland | 1.35e-07 | 4 |
thymic region | 1.35e-07 | 4 |
pharyngeal gland | 1.35e-07 | 4 |
thymus primordium | 1.35e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.38e-10 | 31 |
syndrome | 1.91e-08 | 1 |
leukemia | 7.75e-08 | 39 |