FFCP PHASE1:Hg19::chr5:151055721..151055772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003luh.2_5end | |association_with_transcript=0bp_to_uc003luh.2_5end | ||
|cluster_id=chr5:151055721..151055772,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_11_at_SPARC_5end | |description=CAGE_peak_11_at_SPARC_5end | ||
|id=chr5:151055721..151055772,- | |id=chr5:151055721..151055772,- | ||
|ontology_enrichment_celltype=CL:0000055!2.69e-25!180;CL:0000222!5.28e-21!119;CL:0000057!5.65e-13!75;CL:0000680!5.87e-13!57;CL:0000056!5.87e-13!57;CL:0000355!5.87e-13!57;CL:0000183!1.83e-12!59;CL:0000187!2.01e-12!54;CL:0000192!8.46e-11!42;CL:0000514!8.46e-11!42;CL:0000393!1.19e-10!60;CL:0000211!1.19e-10!60;CL:0000359!3.15e-09!32;CL:0000213!5.44e-09!57;CL:0000215!5.44e-09!57;CL:0000136!2.55e-08!15;CL:0000220!3.98e-07!246;CL:0002321!4.96e-07!248 | |ontology_enrichment_celltype=CL:0000055!2.69e-25!180;CL:0000222!5.28e-21!119;CL:0000057!5.65e-13!75;CL:0000680!5.87e-13!57;CL:0000056!5.87e-13!57;CL:0000355!5.87e-13!57;CL:0000183!1.83e-12!59;CL:0000187!2.01e-12!54;CL:0000192!8.46e-11!42;CL:0000514!8.46e-11!42;CL:0000393!1.19e-10!60;CL:0000211!1.19e-10!60;CL:0000359!3.15e-09!32;CL:0000213!5.44e-09!57;CL:0000215!5.44e-09!57;CL:0000136!2.55e-08!15;CL:0000220!3.98e-07!246;CL:0002321!4.96e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.47e-10;32!CL:0000134;6.66e-10;55!CL:0000192;1.02e-09;43!CL:0000136;9.47e-09;13!CL:0000187;1.07e-08;55!CL:0000048;1.45e-08;58!CL:0000723;1.49e-08;61!CL:0000349;3.79e-07;19!CL:0002494;4.14e-07;16!CL:0000115;8.69e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-23,121;CL:0000680,1.47e-14,58;CL:0000056,1.47e-14,58;CL:0000355,1.47e-14,58;CL:0000187,2.04e-14,55;CL:0000192,9.47e-13,43;CL:0000514,9.47e-13,43;CL:0000057,2.90e-12,76;CL:0000393,8.43e-12,61;CL:0000211,8.43e-12,61;CL:0000359,2.96e-10,32;CL:0000213,3.08e-10,58;CL:0000215,3.08e-10,58;CL:0000136,1.80e-09,15;CL:0000048,9.63e-09,427;CL:0000723,6.04e-08,433;CL:0000115,1.10e-07,36;CL:0002078,1.68e-07,45;CL:0002494,3.13e-07,16;CL:0000349,4.09e-07,19;CL:0000034,5.90e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-09;43!CL:0000355;7.44e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.93e-18!84;UBERON:0002049!3.32e-17!79;UBERON:0007798!3.32e-17!79;UBERON:0000055!1.56e-15!69;UBERON:0001009!2.75e-15!113;UBERON:0001981!3.56e-15!60;UBERON:0007500!3.56e-15!60;UBERON:0004537!3.56e-15!60;UBERON:0006965!3.56e-15!60;UBERON:0004535!4.36e-15!110;UBERON:0000914!6.65e-14!83;UBERON:0002329!6.65e-14!83;UBERON:0003077!6.65e-14!83;UBERON:0003059!6.65e-14!83;UBERON:0007282!6.65e-14!83;UBERON:0009618!6.65e-14!83;UBERON:0007285!6.65e-14!83;UBERON:0004290!1.41e-13!70;UBERON:0001134!2.61e-13!61;UBERON:0002036!2.61e-13!61;UBERON:0003082!2.61e-13!61;UBERON:0002385!6.54e-13!63;UBERON:0001015!6.54e-13!63;UBERON:0000383!6.54e-13!63;UBERON:0001637!2.34e-12!42;UBERON:0003509!2.34e-12!42;UBERON:0004572!2.34e-12!42;UBERON:0003914!2.35e-11!118;UBERON:0000490!1.12e-10!138;UBERON:0000486!4.03e-10!82;UBERON:0005256!2.22e-09!143;UBERON:0004573!3.27e-09!33;UBERON:0004571!3.27e-09!33;UBERON:0000468!8.45e-09!659;UBERON:0000475!9.00e-09!365;UBERON:0000119!6.28e-08!312;UBERON:0000483!7.36e-08!309;UBERON:0004111!8.36e-08!241;UBERON:0000025!1.38e-07!194;UBERON:0000477!1.99e-07!286;UBERON:0007100!2.53e-07!27;UBERON:0000948!2.63e-07!24;UBERON:0005498!2.63e-07!24;UBERON:0004140!2.63e-07!24;UBERON:0009881!2.63e-07!24;UBERON:0004141!2.63e-07!24;UBERON:0003084!2.63e-07!24;UBERON:0007005!2.63e-07!24;UBERON:0004139!2.63e-07!24;UBERON:0004291!2.63e-07!24;UBERON:0002100!5.52e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.26e-10;42!UBERON:0003509;1.26e-10;42!UBERON:0004572;1.26e-10;42!UBERON:0004573;6.41e-09;33!UBERON:0004571;6.41e-09;33!UBERON:0007500;6.45e-09;56!UBERON:0001981;6.45e-09;56!UBERON:0004537;6.45e-09;56!UBERON:0000055;4.11e-08;65!UBERON:0002049;7.74e-08;75!UBERON:0007798;7.74e-08;75!UBERON:0002384;8.55e-07;198 | |||
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| ||
|short_description=p11@SPARC | |short_description=p11@SPARC | ||
}} | }} |
Latest revision as of 10:27, 16 September 2015
Short description: | p11@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_uc003luh.2_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.07e-23 | 121 |
muscle precursor cell | 1.47e-14 | 58 |
myoblast | 1.47e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.47e-14 | 58 |
muscle cell | 2.04e-14 | 55 |
smooth muscle cell | 9.47e-13 | 43 |
smooth muscle myoblast | 9.47e-13 | 43 |
fibroblast | 2.90e-12 | 76 |
electrically responsive cell | 8.43e-12 | 61 |
electrically active cell | 8.43e-12 | 61 |
vascular associated smooth muscle cell | 2.96e-10 | 32 |
lining cell | 3.08e-10 | 58 |
barrier cell | 3.08e-10 | 58 |
fat cell | 1.80e-09 | 15 |
multi fate stem cell | 9.63e-09 | 427 |
somatic stem cell | 6.04e-08 | 433 |
endothelial cell | 1.10e-07 | 36 |
meso-epithelial cell | 1.68e-07 | 45 |
cardiocyte | 3.13e-07 | 16 |
extraembryonic cell | 4.09e-07 | 19 |
stem cell | 5.90e-07 | 441 |