FFCP PHASE1:Hg19::chr7:131241308..131241331,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |||
|TSSclassifier=strong | |||
|UniProt=G3V0E6 | |||
|association_with_transcript=0bp_to_ENST00000446198_5end | |||
|cluster_id=chr7:131241308..131241331,- | |||
|description=CAGE_peak_2_at_PODXL_5end | |||
|id=chr7:131241308..131241331,- | |||
|ontology_enrichment_celltype=CL:0002139!5.38e-13!24;CL:0000213!5.58e-12!57;CL:0000215!5.58e-12!57;CL:0000071!3.24e-10!18;CL:0002546!3.24e-10!18;CL:0000115!6.81e-10!35;CL:0002078!7.28e-10!44;CL:0000066!7.10e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.49e-13;24!CL:0000071;1.18e-10;18!CL:0000115;1.07e-09;36!CL:0000213;6.63e-08;58!CL:0000215;6.63e-08;58!CL:0002078;1.95e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.62e-13,24;CL:0000213,3.68e-13,58;CL:0000215,3.68e-13,58;CL:0002078,4.27e-11,45;CL:0000115,4.72e-11,36;CL:0000071,1.31e-10,18;CL:0002546,1.31e-10,18;CL:0000066,4.47e-09,253 | |||
|ontology_enrichment_development_v019=CL:0002546;1.18e-10;18 | |||
|ontology_enrichment_disease=DOID:305!2.17e-10!106;DOID:0050687!1.43e-07!143;DOID:14566!1.66e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.82e-10,106;DOID:0050687,5.28e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.31e-13!194;UBERON:0004111!1.93e-13!241;UBERON:0000477!1.35e-12!286;UBERON:0007023!1.66e-12!115;UBERON:0000073!7.24e-12!94;UBERON:0001016!7.24e-12!94;UBERON:0005743!1.06e-11!86;UBERON:0001017!3.97e-11!82;UBERON:0001986!3.24e-10!18;UBERON:0004638!3.24e-10!18;UBERON:0004852!3.24e-10!18;UBERON:0000468!1.03e-09!659;UBERON:0001049!4.41e-09!57;UBERON:0005068!4.41e-09!57;UBERON:0006241!4.41e-09!57;UBERON:0007135!4.41e-09!57;UBERON:0000480!5.04e-09!626;UBERON:0000467!6.85e-09!625;UBERON:0000955!7.24e-09!69;UBERON:0006238!7.24e-09!69;UBERON:0003075!9.46e-09!86;UBERON:0007284!9.46e-09!86;UBERON:0002346!5.66e-08!90;UBERON:0000119!7.09e-08!312;UBERON:0000064!9.01e-08!219;UBERON:0003080!9.37e-08!42;UBERON:0002616!1.08e-07!59;UBERON:0000483!1.17e-07!309;UBERON:0002780!1.25e-07!41;UBERON:0001890!1.25e-07!41;UBERON:0006240!1.25e-07!41;UBERON:0000487!1.33e-07!22;UBERON:0000055!2.30e-07!69;UBERON:0002020!4.23e-07!34;UBERON:0003528!4.23e-07!34;UBERON:0001869!5.41e-07!32;UBERON:0001893!5.58e-07!34;UBERON:0006914!8.26e-07!25;UBERON:0002791!8.35e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.18e-10;18!UBERON:0001986;1.18e-10;18!UBERON:0004852;1.18e-10;18!UBERON:0000487;5.02e-08;22!UBERON:0006914;2.81e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.70e-13,114;UBERON:0000025,4.86e-13,192;UBERON:0004111,4.12e-12,240;UBERON:0001017,2.39e-11,81;UBERON:0001016,2.46e-11,89;UBERON:0004638,1.31e-10,18;UBERON:0001986,1.31e-10,18;UBERON:0004852,1.31e-10,18;UBERON:0001049,3.65e-09,56;UBERON:0005068,3.65e-09,56;UBERON:0006241,3.65e-09,56;UBERON:0007135,3.65e-09,56;UBERON:0000955,5.41e-09,68;UBERON:0006238,5.41e-09,68;UBERON:0000073,1.12e-08,53;UBERON:0002616,1.12e-08,53;UBERON:0000487,4.96e-08,22;UBERON:0003075,5.39e-08,82;UBERON:0007284,5.39e-08,82;UBERON:0002780,6.60e-08,41;UBERON:0001890,6.60e-08,41;UBERON:0003080,6.60e-08,41;UBERON:0006240,6.60e-08,41;UBERON:0003528,2.35e-07,34;UBERON:0002020,2.35e-07,34;UBERON:0006914,2.56e-07,25;UBERON:0000055,2.61e-07,68;UBERON:0001869,3.04e-07,32;UBERON:0001893,3.15e-07,34;UBERON:0002346,3.96e-07,86;UBERON:0002791,6.36e-07,32 | |||
|phase1_expression=2.18014055124668,1.71280419112787,1.9733616573436,3.00219895059391,0,2.61701557230111,0,1.89515962028049,0,1.47440361900905,0,74.4885078963887,59.875104057859,0,0,1.34465029290355,4.82155622419182,0.730310090387373,3.41552959153355,2.09305798730539,0.408001382488506,15.0458266309482,15.170507317946,10.4024563055392,30.0046908631579,0.534893840235659,0.985207073399349,1.10195093839151,0.393364276848904,0.767658796194425,0.154816123316076,0,0.90361775633475,0.369754010166788,0.309868802321207,13.3639078538176,0.293600439334847,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,2.42159801053347,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,1.14681968437569,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0.869409257205157,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.80642697289893,0.534880391567015,0.289648807765598,0,0,1.15076305659177,2.89151321907653,0.50133791063589,0.869079113764942,9.54343136461319,2.43317435151318,3.02511414925017,1.77383517970051,3.07421749925941,14.0802506160041,0.364295288292542,0,3.24547393654683,5.04976238167875,4.12169677608482,0,0,0.371457501329565,43.9264920280418,27.527507043396,77.7594723601011,26.0041653285044,32.7209560243727,29.7127485295273,30.3042701478375,17.8307563826837,16.3652480835887,28.7859726977616,43.1027369306787,35.7327889687701,61.0155143870424,12.1328816514137,40.507097394088,11.3410654920781,19.0849966732244,23.9862453429476,12.2653309972707,32.2750324253164,26.3810511259786,0,0,0,6.46063537203914,0.759783069987479,1.05927344650575,8.60509862246441,5.32002573297536,3.36406560085384,9.60740961567345,6.41335625884616,0.933633106199299,2.02066008104532,0.980771418680752,4.54072282934794,1.15235184896,0,0.312160076830321,6.27519003698894,1.79338416662161,1.64408298101271,7.93177427403845,5.19667984798319,0.204154171254893,0.245668634623536,0,0,0,3.64064544775211,1.43723628363248,0.505008341862199,0,0,0.438977620880838,0.612975591598039,0.300476117813194,1.24775401476023,95.4352861864746,2.56268866582281,4.02670612203168,65.1197678503153,4.43125875725287,11.8514648420989,6.14185625894246,118.312208901128,17.636097934177,24.233642327435,2.66944706062668,1.61646056818812,58.931592357758,31.636158843479,6.78242369241951,6.1843473012255,0.545492241181669,0.286804595389004,30.9813213569172,31.144495555549,26.0274432027721,20.0065836179665,40.1190152892249,29.5631660851422,0,0,11.0507937081984,0,0,11.8306800039844,9.7779120245299,10.3634742849897,8.49263590039433,10.4582133164355,13.5244252893325,11.1909985772936,10.792180581894,5.38646019724947,15.5012645471176,29.4507724987236,13.1703683626048,4.41026134156626,0,0.982827216677626,1.77236972004421,0.882926198829301,4.05861847192275,1.88724591328378,0,0,0,0.0925884451585296,0,0,7.21656710126366,3.59384255422738,2.23076519048061,39.5564066865342,29.6310728049031,29.8699019008319,9.4824527755113,1.71697232418975,0.246217006087397,0.702012795417713,0.445893486866185,0.93733833986777,0,0,0,0,1.53353071666084,0,0,0.621984346622316,0,0.88369703398466,0,0,0,0,0.308482478109971,0,0,8.97048674762886,3.92364061949952,4.6936502925408,1.55126058909333,3.57656445851882,5.071816515336,4.5209479819428,6.24044621468197,0,0,0.532844358032199,0,0,0,0.977208552881205,0.355391948742546,0,0.904318131178758,0,7.19805536510811,0,0,0,0.479249710983165,0,28.5273810081437,8.10775317338444,1.2328579353023,16.2945476548305,2.12961773587702,0,0.431255149719035,0.385029108839245,9.65559572045361,16.9181810014908,2.31986643833309,3.85287410269002,1.91381625495949,0,0,0,0,0,0,1.45579603071565,0.713715955188647,1.41932173530541,1.7571212248907,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,1.56640925970192,0.686286847621712,0.413536052245775,0,0.853820462427555,1.81876542867756,3.32870879020994,3.32629322662648,4.46594054073798,17.187741008263,6.45518217196069,3.71603532841533,9.21073048320066,3.86049410744658,19.2943486378488,4.31787142647436,2.48586415438378,5.91315523299426,1.55776328755086,7.78609535681727,7.25156697549733,0,0,0.459257792658427,0.182091168006717,0.262248829918848,7.21919380651859,6.2382423054576,17.2556949218908,13.1525302187935,10.6607145181804,51.1800228319035,55.1103605095911,14.0345345466391,23.1340879035434,2.70946437543853,6.02027728625824,2.29388645740534,9.14183609821597,3.58199607555485,0,0,3.33385162651306,10.8244833080903,5.85681110395745,8.24328093181778,6.50143200210238,3.87794649626764,0,0.650060246036521,1.6068392984416,0.48335359146061,0.154048617114644,0.767518373630648,3.1702411671442,0.214840489736547,0,1.78975917573812,1.60257664164127,0.991709492165869,0.3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| |||
|short_description=p2@PODXL | |||
}} |
Latest revision as of 10:15, 16 September 2015
Short description: | p2@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PODXL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000446198_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | G3V0E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.62e-13 | 24 |
lining cell | 3.68e-13 | 58 |
barrier cell | 3.68e-13 | 58 |
meso-epithelial cell | 4.27e-11 | 45 |
endothelial cell | 4.72e-11 | 36 |
blood vessel endothelial cell | 1.31e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-10 | 18 |
epithelial cell | 4.47e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.70e-13 | 114 |
tube | 4.86e-13 | 192 |
anatomical conduit | 4.12e-12 | 240 |
central nervous system | 2.39e-11 | 81 |
nervous system | 2.46e-11 | 89 |
blood vessel endothelium | 1.31e-10 | 18 |
endothelium | 1.31e-10 | 18 |
cardiovascular system endothelium | 1.31e-10 | 18 |
neural tube | 3.65e-09 | 56 |
neural rod | 3.65e-09 | 56 |
future spinal cord | 3.65e-09 | 56 |
neural keel | 3.65e-09 | 56 |
brain | 5.41e-09 | 68 |
future brain | 5.41e-09 | 68 |
regional part of nervous system | 1.12e-08 | 53 |
regional part of brain | 1.12e-08 | 53 |
simple squamous epithelium | 4.96e-08 | 22 |
neural plate | 5.39e-08 | 82 |
presumptive neural plate | 5.39e-08 | 82 |
regional part of forebrain | 6.60e-08 | 41 |
forebrain | 6.60e-08 | 41 |
anterior neural tube | 6.60e-08 | 41 |
future forebrain | 6.60e-08 | 41 |
brain grey matter | 2.35e-07 | 34 |
gray matter | 2.35e-07 | 34 |
squamous epithelium | 2.56e-07 | 25 |
vessel | 2.61e-07 | 68 |
cerebral hemisphere | 3.04e-07 | 32 |
telencephalon | 3.15e-07 | 34 |
neurectoderm | 3.96e-07 | 86 |
regional part of telencephalon | 6.36e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.82e-10 | 106 |
cell type cancer | 5.28e-07 | 143 |