FFCP PHASE1:Hg19::chr7:131196033..131196064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-376bp_to_ENST00000482581_5end | |association_with_transcript=-376bp_to_ENST00000482581_5end | ||
|cluster_id=chr7:131196033..131196064,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_7_at_PODXL_5end | |description=CAGE_peak_7_at_PODXL_5end | ||
|id=chr7:131196033..131196064,- | |id=chr7:131196033..131196064,- | ||
|ontology_enrichment_celltype=CL:0000213!1.60e-07!57;CL:0000215!1.60e-07!57 | |ontology_enrichment_celltype=CL:0000213!1.60e-07!57;CL:0000215!1.60e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.07e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.10e-11,5;CL:0000115,5.28e-07,36;CL:0000213,9.80e-07,58;CL:0000215,9.80e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-16!115;UBERON:0005743!4.11e-13!86;UBERON:0001049!3.69e-12!57;UBERON:0005068!3.69e-12!57;UBERON:0006241!3.69e-12!57;UBERON:0007135!3.69e-12!57;UBERON:0001017!4.61e-12!82;UBERON:0002020!1.15e-11!34;UBERON:0003528!1.15e-11!34;UBERON:0000073!4.61e-11!94;UBERON:0001016!4.61e-11!94;UBERON:0003075!6.54e-11!86;UBERON:0007284!6.54e-11!86;UBERON:0001869!1.72e-10!32;UBERON:0002346!4.26e-10!90;UBERON:0001893!5.58e-10!34;UBERON:0002791!5.81e-10!33;UBERON:0000468!1.92e-09!659;UBERON:0000955!2.19e-09!69;UBERON:0006238!2.19e-09!69;UBERON:0002616!9.37e-09!59;UBERON:0003080!1.00e-08!42;UBERON:0000467!1.35e-08!625;UBERON:0000025!1.36e-08!194;UBERON:0000064!1.45e-08!219;UBERON:0000477!1.78e-08!286;UBERON:0000480!1.78e-08!626;UBERON:0002780!2.31e-08!41;UBERON:0001890!2.31e-08!41;UBERON:0006240!2.31e-08!41;UBERON:0000956!3.88e-08!25;UBERON:0000203!3.88e-08!25;UBERON:0004111!4.06e-08!241;UBERON:0000062!4.65e-07!511;UBERON:0000119!6.33e-07!312;UBERON:0000483!7.34e-07!309;UBERON:0001950!7.88e-07!20;UBERON:0002619!9.01e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.65e-10;49!UBERON:0000956;3.94e-10;25!UBERON:0000203;3.94e-10;25!UBERON:0003528;5.75e-09;34!UBERON:0002020;5.75e-09;34!UBERON:0002619;1.63e-08;22!UBERON:0003135;3.92e-08;11!UBERON:0002791;4.37e-08;32!UBERON:0001869;4.37e-08;32!UBERON:0001950;5.01e-08;20!UBERON:0003978;6.42e-07;3!UBERON:0000946;6.42e-07;3!UBERON:0001893;7.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.50e-10,34;UBERON:0002020,3.50e-10,34;UBERON:0000956,4.22e-10,25;UBERON:0000203,4.22e-10,25;UBERON:0002619,2.01e-08,22;UBERON:0002791,2.11e-08,32;UBERON:0001869,2.11e-08,32;UBERON:0003135,3.23e-08,11;UBERON:0001950,6.18e-08,20;UBERON:0001893,1.01e-07,34;UBERON:0001049,3.51e-07,56;UBERON:0005068,3.51e-07,56;UBERON:0006241,3.51e-07,56;UBERON:0007135,3.51e-07,56;UBERON:0001017,6.06e-07,81;UBERON:0000073,7.28e-07,53;UBERON:0002616,7.28e-07,53;UBERON:0002780,7.82e-07,41;UBERON:0001890,7.82e-07,41;UBERON:0003080,7.82e-07,41;UBERON:0006240,7.82e-07,41;UBERON:0003978,8.43e-07,3;UBERON:0009751,8.43e-07,3;UBERON:0000946,8.43e-07,3;UBERON:0002523,8.43e-07,3;UBERON:0005983,8.43e-07,3;UBERON:0002165,8.43e-07,3;UBERON:0002062,8.43e-07,3;UBERON:0007280,8.43e-07,3 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,1.77936752594749,2.38531015230125,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,2.58070378531837,1.38856200643038,0,0.838998872419812,1.92582629358047,0.835979866147242,0.258416759169329,0.35576626268671,0,0.805658634218294,0,2.68468263302986,0,4.86085168729056,0.17859945656816,1.12264686313085,0.675668882899933,0,0,0.732806975721629,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0.323745888736263,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.50765069150968,0,0.211931901159562,2.10063767259082,0.206105058476878,0.772921620136887,0,1.0126579934476,0.292311015483596,2.01947019395292,0.0920498986422993,0,3.55009592516614,3.22406714328449,0.67824236924195,0.57978255948989,0,0,8.90408054746046,7.55419679432466,6.04208502921496,4.5610864206763,8.83122978064699,2.91981887260664,0,0,0,0,0,0.354920400119532,0.674338760312407,0.723033089650446,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0,0.769494313892781,0,2.80483547606892,0,0,0,0,1.77236972004421,0,0.614942192715568,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,2.59859605969933,1.38895653772983,4.56609965363036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,2.85273810081437,0.289562613335158,0,0.358121926479791,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0.813472649219715,0.120859449591622,0,0,0,0,0,0,0.385076685522074,0,0,0.105551628892876,4.54933536283586,4.59253004246592,1.29549549661284,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0.563391205064483,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0.0711418433484141,0,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0,0,0,0.846458889008016,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0.111443384277478,0.284136146806413,0,0,0,2.98244294329889,1.26602474769461,0,0,0,0.996239941255349,0,0,0.715880777515084,0,0,0.269605053441981,0,0,0.295930216910801,0,0,0,0.74214478529481,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.227586896570999,0,0.472775363535873,0.689486746482929,0,0,0.885741385813839,0.844175070377856,1.52581736317083,0.331737779793674,0.295547618953547,0.87754158861589,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.176915129006678,0.611030144933625,0,0,0,0,2.40773294189637,0,1.64209310294099,0,1.45668227720456,4.3404284313433,2.41981432097328,0,0.063186579628488,0,0.207376382794494,1.32930774541437,1.65495977937749,2.82539626566503,0,0,0,1.38847790668105,0.0979923974143777,0.0870592065804026,0.52418000472609,0,5.12808555832151,2.19267951258557,3.44884919623479,0.0969890164884194,0.0882561266915003,3.38971111170799,0.685209623233754,0.794858446811959,0.189932387867636,0.391102765469606,0.160317640503067,0,2.19790570540343,0.144090417154106,0,0.686379991447858,0.288109595976299,0.372757606696298,0,1.63085047288337,2.30126261887133,0,0,0.600420288709789,1.23214841002794,0,0,0,4.18923601908381,2.06244381610515,3.58936512288407,1.59743200399193,4.29226048136571,0.446342914883745,0.403100834920358,0,0,0,0,0.13480708770837,0,0,0,1.36203406111576,3.05430982083536,4.40126197111148,17.863934535255,0,0,0.182248669974074,0,1.10327990218877,2.62272940674991,0.105600336519406,0,0,2.1440859791201,1.32418394073086,0.5085370753095,0.542999601753713,3.45688596480507,3.91904832131291,0,0,0,0,0.146552233678082,0,1.93924434542326,1.05786081394152,0,0.704815022316672,0.747511887973863,2.67247318669432,1.65695622138878,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0.157054096250234,1.77213635993397,5.36915565568638,1.001527445652,0.573409195690071,0.443716206147409,0.0620964029413835,0.276697269872462,0.124980407962107,0,0,6.35217713185063,2.81000943484129,0.724605143054126,0,0,0,0,0,0,0,0.1512309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| ||
|short_description=p7@PODXL | |short_description=p7@PODXL | ||
}} | }} |
Latest revision as of 10:10, 16 September 2015
Short description: | p7@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -376bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.10e-11 | 5 |
endothelial cell | 5.28e-07 | 36 |
lining cell | 9.80e-07 | 58 |
barrier cell | 9.80e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.50e-10 | 34 |
gray matter | 3.50e-10 | 34 |
cerebral cortex | 4.22e-10 | 25 |
pallium | 4.22e-10 | 25 |
regional part of cerebral cortex | 2.01e-08 | 22 |
regional part of telencephalon | 2.11e-08 | 32 |
cerebral hemisphere | 2.11e-08 | 32 |
male reproductive organ | 3.23e-08 | 11 |
neocortex | 6.18e-08 | 20 |
telencephalon | 1.01e-07 | 34 |
neural tube | 3.51e-07 | 56 |
neural rod | 3.51e-07 | 56 |
future spinal cord | 3.51e-07 | 56 |
neural keel | 3.51e-07 | 56 |
central nervous system | 6.06e-07 | 81 |
regional part of nervous system | 7.28e-07 | 53 |
regional part of brain | 7.28e-07 | 53 |
regional part of forebrain | 7.82e-07 | 41 |
forebrain | 7.82e-07 | 41 |
anterior neural tube | 7.82e-07 | 41 |
future forebrain | 7.82e-07 | 41 |
valve | 8.43e-07 | 3 |
cardiac mesenchyme | 8.43e-07 | 3 |
cardial valve | 8.43e-07 | 3 |
tunica intima | 8.43e-07 | 3 |
heart layer | 8.43e-07 | 3 |
endocardium | 8.43e-07 | 3 |
endocardial cushion | 8.43e-07 | 3 |
presumptive endocardium | 8.43e-07 | 3 |