FFCP PHASE1:Hg19::chr7:131195806..131195819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_ENST00000482581_5end | |association_with_transcript=-149bp_to_ENST00000482581_5end | ||
|cluster_id=chr7:131195806..131195819,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_6_at_PODXL_5end | |description=CAGE_peak_6_at_PODXL_5end | ||
|id=chr7:131195806..131195819,- | |id=chr7:131195806..131195819,- | ||
|ontology_enrichment_celltype=CL:0002139!5.99e-07!24 | |ontology_enrichment_celltype=CL:0002139!5.99e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.22e-09;5!CL:0002319;9.42e-09;25!CL:0000540;6.29e-07;6!CL:0000404;6.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.27e-09,5;CL:0000047,1.18e-08,8;CL:0002319,1.29e-08,25;CL:0000540,6.89e-07,6;CL:0000031,6.89e-07,6;CL:0000404,6.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.29e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.96e-07!106 | |ontology_enrichment_disease=DOID:305!2.96e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.90e-16!86;UBERON:0001017!3.04e-16!82;UBERON:0007023!7.84e-15!115;UBERON:0000073!1.03e-14!94;UBERON:0001016!1.03e-14!94;UBERON:0001049!1.01e-13!57;UBERON:0005068!1.01e-13!57;UBERON:0006241!1.01e-13!57;UBERON:0007135!1.01e-13!57;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0003080!2.12e-11!42;UBERON:0002020!3.83e-11!34;UBERON:0003528!3.83e-11!34;UBERON:0003075!3.85e-11!86;UBERON:0007284!3.85e-11!86;UBERON:0002346!5.56e-11!90;UBERON:0002616!6.39e-11!59;UBERON:0002780!7.03e-11!41;UBERON:0001890!7.03e-11!41;UBERON:0006240!7.03e-11!41;UBERON:0001893!1.50e-10!34;UBERON:0002791!2.50e-10!33;UBERON:0001869!2.75e-10!32;UBERON:0000468!1.44e-09!659;UBERON:0000025!8.45e-09!194;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000477!1.27e-07!286;UBERON:0000467!1.30e-07!625;UBERON:0004111!1.32e-07!241;UBERON:0000480!1.74e-07!626;UBERON:0000924!2.87e-07!173;UBERON:0006601!2.87e-07!173;UBERON:0004121!3.06e-07!169;UBERON:0003056!3.38e-07!61;UBERON:0001950!3.67e-07!20;UBERON:0002619!4.49e-07!22 | |ontology_enrichment_uberon=UBERON:0005743!1.90e-16!86;UBERON:0001017!3.04e-16!82;UBERON:0007023!7.84e-15!115;UBERON:0000073!1.03e-14!94;UBERON:0001016!1.03e-14!94;UBERON:0001049!1.01e-13!57;UBERON:0005068!1.01e-13!57;UBERON:0006241!1.01e-13!57;UBERON:0007135!1.01e-13!57;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0003080!2.12e-11!42;UBERON:0002020!3.83e-11!34;UBERON:0003528!3.83e-11!34;UBERON:0003075!3.85e-11!86;UBERON:0007284!3.85e-11!86;UBERON:0002346!5.56e-11!90;UBERON:0002616!6.39e-11!59;UBERON:0002780!7.03e-11!41;UBERON:0001890!7.03e-11!41;UBERON:0006240!7.03e-11!41;UBERON:0001893!1.50e-10!34;UBERON:0002791!2.50e-10!33;UBERON:0001869!2.75e-10!32;UBERON:0000468!1.44e-09!659;UBERON:0000025!8.45e-09!194;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000477!1.27e-07!286;UBERON:0000467!1.30e-07!625;UBERON:0004111!1.32e-07!241;UBERON:0000480!1.74e-07!626;UBERON:0000924!2.87e-07!173;UBERON:0006601!2.87e-07!173;UBERON:0004121!3.06e-07!169;UBERON:0003056!3.38e-07!61;UBERON:0001950!3.67e-07!20;UBERON:0002619!4.49e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.97e-08;49!UBERON:0003135;5.33e-08;11!UBERON:0000956;1.74e-07;25!UBERON:0000203;1.74e-07;25!UBERON:0003528;9.81e-07;34!UBERON:0002020;9.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.47e-11,81;UBERON:0001016,6.58e-09,89;UBERON:0003135,9.79e-08,11;UBERON:0000956,1.13e-07,25;UBERON:0000203,1.13e-07,25;UBERON:0003528,1.85e-07,34;UBERON:0002020,1.85e-07,34;UBERON:0001049,2.61e-07,56;UBERON:0005068,2.61e-07,56;UBERON:0006241,2.61e-07,56;UBERON:0007135,2.61e-07,56;UBERON:0000073,3.09e-07,53;UBERON:0002616,3.09e-07,53;UBERON:0000955,4.14e-07,68;UBERON:0006238,4.14e-07,68;UBERON:0002791,4.76e-07,32;UBERON:0001869,4.76e-07,32;UBERON:0002780,6.11e-07,41;UBERON:0001890,6.11e-07,41;UBERON:0003080,6.11e-07,41;UBERON:0006240,6.11e-07,41 | |||
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| ||
|short_description=p6@PODXL | |short_description=p6@PODXL | ||
}} | }} |
Latest revision as of 10:05, 16 September 2015
Short description: | p6@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -149bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.27e-09 | 5 |
neuronal stem cell | 1.18e-08 | 8 |
neural cell | 1.29e-08 | 25 |
neuron | 6.89e-07 | 6 |
neuroblast | 6.89e-07 | 6 |
electrically signaling cell | 6.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.47e-11 | 81 |
nervous system | 6.58e-09 | 89 |
male reproductive organ | 9.79e-08 | 11 |
cerebral cortex | 1.13e-07 | 25 |
pallium | 1.13e-07 | 25 |
brain grey matter | 1.85e-07 | 34 |
gray matter | 1.85e-07 | 34 |
neural tube | 2.61e-07 | 56 |
neural rod | 2.61e-07 | 56 |
future spinal cord | 2.61e-07 | 56 |
neural keel | 2.61e-07 | 56 |
regional part of nervous system | 3.09e-07 | 53 |
regional part of brain | 3.09e-07 | 53 |
brain | 4.14e-07 | 68 |
future brain | 4.14e-07 | 68 |
regional part of telencephalon | 4.76e-07 | 32 |
cerebral hemisphere | 4.76e-07 | 32 |
regional part of forebrain | 6.11e-07 | 41 |
forebrain | 6.11e-07 | 41 |
anterior neural tube | 6.11e-07 | 41 |
future forebrain | 6.11e-07 | 41 |