FFCP PHASE1:Hg19::chr7:131195806..131195819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_ENST00000482581_5end | |association_with_transcript=-149bp_to_ENST00000482581_5end | ||
|cluster_id=chr7:131195806..131195819,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_6_at_PODXL_5end | |description=CAGE_peak_6_at_PODXL_5end | ||
|id=chr7:131195806..131195819,- | |id=chr7:131195806..131195819,- | ||
|ontology_enrichment_celltype=CL:0002139!5.99e-07!24 | |ontology_enrichment_celltype=CL:0002139!5.99e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.22e-09;5!CL:0002319;9.42e-09;25!CL:0000540;6.29e-07;6!CL:0000404;6.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.27e-09,5;CL:0000047,1.18e-08,8;CL:0002319,1.29e-08,25;CL:0000540,6.89e-07,6;CL:0000031,6.89e-07,6;CL:0000404,6.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.29e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.96e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.90e-16!86;UBERON:0001017!3.04e-16!82;UBERON:0007023!7.84e-15!115;UBERON:0000073!1.03e-14!94;UBERON:0001016!1.03e-14!94;UBERON:0001049!1.01e-13!57;UBERON:0005068!1.01e-13!57;UBERON:0006241!1.01e-13!57;UBERON:0007135!1.01e-13!57;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0003080!2.12e-11!42;UBERON:0002020!3.83e-11!34;UBERON:0003528!3.83e-11!34;UBERON:0003075!3.85e-11!86;UBERON:0007284!3.85e-11!86;UBERON:0002346!5.56e-11!90;UBERON:0002616!6.39e-11!59;UBERON:0002780!7.03e-11!41;UBERON:0001890!7.03e-11!41;UBERON:0006240!7.03e-11!41;UBERON:0001893!1.50e-10!34;UBERON:0002791!2.50e-10!33;UBERON:0001869!2.75e-10!32;UBERON:0000468!1.44e-09!659;UBERON:0000025!8.45e-09!194;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000477!1.27e-07!286;UBERON:0000467!1.30e-07!625;UBERON:0004111!1.32e-07!241;UBERON:0000480!1.74e-07!626;UBERON:0000924!2.87e-07!173;UBERON:0006601!2.87e-07!173;UBERON:0004121!3.06e-07!169;UBERON:0003056!3.38e-07!61;UBERON:0001950!3.67e-07!20;UBERON:0002619!4.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.97e-08;49!UBERON:0003135;5.33e-08;11!UBERON:0000956;1.74e-07;25!UBERON:0000203;1.74e-07;25!UBERON:0003528;9.81e-07;34!UBERON:0002020;9.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.47e-11,81;UBERON:0001016,6.58e-09,89;UBERON:0003135,9.79e-08,11;UBERON:0000956,1.13e-07,25;UBERON:0000203,1.13e-07,25;UBERON:0003528,1.85e-07,34;UBERON:0002020,1.85e-07,34;UBERON:0001049,2.61e-07,56;UBERON:0005068,2.61e-07,56;UBERON:0006241,2.61e-07,56;UBERON:0007135,2.61e-07,56;UBERON:0000073,3.09e-07,53;UBERON:0002616,3.09e-07,53;UBERON:0000955,4.14e-07,68;UBERON:0006238,4.14e-07,68;UBERON:0002791,4.76e-07,32;UBERON:0001869,4.76e-07,32;UBERON:0002780,6.11e-07,41;UBERON:0001890,6.11e-07,41;UBERON:0003080,6.11e-07,41;UBERON:0006240,6.11e-07,41 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,3.71350332621293,3.9565046734268,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,1.14494394852423,1.77936752594749,3.26410862946487,0,0,0.157421562627358,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.982343066232845,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0,0.838998872419812,5.50236083880135,2.29894463190492,0,0,1.67360306382335,1.20848795132744,0.760272105718513,7.07779966889692,0.367663080345869,6.48113558305408,0.17859945656816,0.44905874525234,0.112611480483322,0,1.89853131913626,1.83201743930407,0,0,0,0,0,0,1.43418310374407,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,15.2481190335533,0,0,4.50136644126603,0,1.03056216018252,0.18611685633159,5.56961896396179,1.07180705677318,4.29137416214995,0.184099797284599,0.161646056818812,4.61512470271599,1.41052937518696,0,0.193260853163297,0,0,8.53815942907168,7.68672656264614,8.13357600086629,4.45742536566093,11.3544382894033,6.93456982244077,0,0,1.38134921352481,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.55146986366197,0.871517776369625,0.71181185733329,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,2.30986316417718,2.31492756288305,3.99533719692656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,1.27047312111232,1.30139853857622,2.31986643833309,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0.248107807818777,0.460385919864187,2.24528075546459,0.256278298511402,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.697262270759755,0.725156697549733,0,0,0,0,0,0,0.770153371044148,0,0,0.316654886678627,0,2.89159298970077,0.863663664408557,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.27470839445503,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,1.21856744815642,1.05650146756755,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0,0.563391205064483,0.143411352204052,0,0,0,1.05553817648832,0.658589785919804,0,0,0,0,0,0.564862804660675,0,0,0,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.47748896947538,0,0.614321404198464,1.9882952955326,1.54736358051564,0,0,0.211125408127993,1.59398390600856,0,0,2.24991101504741,0,0.311039587661807,0.359473404589307,0,0,0.295930216910801,0,0,1.93866549219044,0.556608588971108,0,0.260427761085233,0,2.17499872630438,0.341380344856499,0,0.472775363535873,1.72371686620732,0,0,0.885741385813839,1.08536794762867,1.52581736317083,1.43753037910592,0.886642856860642,0.438770794307945,0.32681539055697,0,0.461701551022782,0,0,0.0897576444097721,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.69623685720729,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,3.21031058919516,0.234264445725339,1.094728735294,0.391329237864179,3.3989253134773,3.15667522279512,0,0.61214552326098,0.695052375913368,0.450970258243478,0.103688191397247,1.99396161812156,0.330991955875499,1.2557316736289,1.19472429772959,0.284609546029793,0,1.56203764501618,0.195984794828755,0.0870592065804026,1.04836000945218,0.171986032471617,5.99889253992328,4.23918039099876,5.50173562256502,0,0,3.61569185248852,1.09633539717401,0.794858446811959,0.443175571691151,3.32437350649165,0,0.426905989478705,1.9980960958213,0,0.114536596165916,0.514784993585894,0.288109595976299,0.372757606696298,0.471388069233591,3.26170094576674,3.451893928307,0.101998217636322,0,0.600420288709789,1.23214841002794,0,0,0.262887354279314,4.46851842035607,2.52076466412852,0.717873024576814,0.599037001496973,3.004582336956,0.223171457441873,0.403100834920358,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0.196854963029498,0,0,2.45166131000836,6.91238538399582,10.3154577447925,29.4962640000721,0,0,0.182248669974074,0,1.65491985328316,3.46200281690987,0,0,0,0.714695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| ||
|short_description=p6@PODXL | |short_description=p6@PODXL | ||
}} | }} |
Latest revision as of 10:05, 16 September 2015
Short description: | p6@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -149bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.27e-09 | 5 |
neuronal stem cell | 1.18e-08 | 8 |
neural cell | 1.29e-08 | 25 |
neuron | 6.89e-07 | 6 |
neuroblast | 6.89e-07 | 6 |
electrically signaling cell | 6.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.47e-11 | 81 |
nervous system | 6.58e-09 | 89 |
male reproductive organ | 9.79e-08 | 11 |
cerebral cortex | 1.13e-07 | 25 |
pallium | 1.13e-07 | 25 |
brain grey matter | 1.85e-07 | 34 |
gray matter | 1.85e-07 | 34 |
neural tube | 2.61e-07 | 56 |
neural rod | 2.61e-07 | 56 |
future spinal cord | 2.61e-07 | 56 |
neural keel | 2.61e-07 | 56 |
regional part of nervous system | 3.09e-07 | 53 |
regional part of brain | 3.09e-07 | 53 |
brain | 4.14e-07 | 68 |
future brain | 4.14e-07 | 68 |
regional part of telencephalon | 4.76e-07 | 32 |
cerebral hemisphere | 4.76e-07 | 32 |
regional part of forebrain | 6.11e-07 | 41 |
forebrain | 6.11e-07 | 41 |
anterior neural tube | 6.11e-07 | 41 |
future forebrain | 6.11e-07 | 41 |