FFCP PHASE1:Hg19::chr2:113542063..113542077,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3552 | |EntrezGene=3552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5991 | |HGNC=5991 | ||
|TSSclassifier=strong | |||
|UniProt=P01583 | |UniProt=P01583 | ||
|association_with_transcript=89bp_to_ENST00000263339_5end | |association_with_transcript=89bp_to_ENST00000263339_5end | ||
|cluster_id=chr2:113542063..113542077,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_IL1A_5end | |description=CAGE_peak_1_at_IL1A_5end | ||
|id=chr2:113542063..113542077,- | |id=chr2:113542063..113542077,- | ||
|ontology_enrichment_celltype=CL:0000766!5.56e-19!76;CL:0000557!3.29e-17!71;CL:0002057!3.42e-17!42;CL:0000860!3.53e-17!45;CL:0002009!3.92e-17!65;CL:0002194!5.25e-16!63;CL:0000576!5.25e-16!63;CL:0000040!5.25e-16!63;CL:0000559!5.25e-16!63;CL:0000839!1.77e-15!70;CL:0000359!4.37e-11!32;CL:0002076!1.68e-08!43;CL:0000763!8.38e-08!112;CL:0000049!8.38e-08!112;CL:0000738!3.46e-07!140;CL:0000192!8.05e-07!42;CL:0000514!8.05e-07!42 | |ontology_enrichment_celltype=CL:0000766!5.56e-19!76;CL:0000557!3.29e-17!71;CL:0002057!3.42e-17!42;CL:0000860!3.53e-17!45;CL:0002009!3.92e-17!65;CL:0002194!5.25e-16!63;CL:0000576!5.25e-16!63;CL:0000040!5.25e-16!63;CL:0000559!5.25e-16!63;CL:0000839!1.77e-15!70;CL:0000359!4.37e-11!32;CL:0002076!1.68e-08!43;CL:0000763!8.38e-08!112;CL:0000049!8.38e-08!112;CL:0000738!3.46e-07!140;CL:0000192!8.05e-07!42;CL:0000514!8.05e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.36e-20;33!CL:0002057;7.36e-20;33!CL:0000473;1.22e-16;39!CL:0000234;1.22e-16;39!CL:0000359;8.01e-12;32!CL:0000576;5.57e-10;48!CL:0000766;1.97e-09;69!CL:0002539;6.46e-08;10!CL:0002076;1.15e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.16e-21,72;CL:0000473,2.43e-20,48;CL:0000234,2.43e-20,48;CL:0000860,4.46e-20,42;CL:0002057,4.46e-20,42;CL:0002009,8.63e-19,61;CL:0000557,1.48e-18,67;CL:0002194,2.17e-17,59;CL:0000576,2.17e-17,59;CL:0000040,2.17e-17,59;CL:0000559,2.17e-17,59;CL:0000839,1.16e-16,66;CL:0000359,2.39e-12,32;CL:0000763,1.70e-10,108;CL:0000049,1.70e-10,108;CL:0002076,6.69e-10,42;CL:0000738,1.12e-09,136;CL:0002539,6.57e-08,10;CL:0000192,2.15e-07,43;CL:0000514,2.15e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!5.09e-14!216;UBERON:0002371!4.61e-13!80;UBERON:0001637!1.46e-12!42;UBERON:0003509!1.46e-12!42;UBERON:0004572!1.46e-12!42;UBERON:0001474!5.35e-11!86;UBERON:0004573!9.77e-11!33;UBERON:0004571!9.77e-11!33;UBERON:0002390!1.21e-10!102;UBERON:0003061!1.21e-10!102;UBERON:0002204!2.07e-10!167;UBERON:0002193!3.78e-10!112;UBERON:0002050!1.17e-09!605;UBERON:0005423!1.17e-09!605;UBERON:0000923!1.33e-09!604;UBERON:0005291!1.33e-09!604;UBERON:0006598!1.33e-09!604;UBERON:0002532!1.33e-09!604;UBERON:0000922!1.78e-09!612;UBERON:0000467!7.19e-09!625;UBERON:0004765!7.34e-09!101;UBERON:0001434!7.34e-09!101;UBERON:0000480!1.07e-08!626;UBERON:0001981!4.19e-08!60;UBERON:0007500!4.19e-08!60;UBERON:0004537!4.19e-08!60;UBERON:0006965!4.19e-08!60;UBERON:0004872!4.90e-08!84;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448;UBERON:0000055!3.48e-07!69;UBERON:0002405!4.05e-07!115;UBERON:0000468!9.61e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.14e-11;33!UBERON:0004571;4.14e-11;33!UBERON:0001637;4.29e-09;42!UBERON:0003509;4.29e-09;42!UBERON:0004572;4.29e-09;42!UBERON:0004237;6.46e-08;10!UBERON:0004695;6.46e-08;10!UBERON:0002111;6.46e-08;10!UBERON:0004178;6.46e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.62e-14,203;UBERON:0002371,3.57e-14,76;UBERON:0001637,1.62e-13,42;UBERON:0003509,1.62e-13,42;UBERON:0004572,1.62e-13,42;UBERON:0001474,1.61e-12,82;UBERON:0004765,1.71e-12,90;UBERON:0004573,2.65e-12,33;UBERON:0004571,2.65e-12,33;UBERON:0002204,1.32e-11,167;UBERON:0002390,2.32e-11,98;UBERON:0003061,2.32e-11,98;UBERON:0002193,1.68e-10,108;UBERON:0002405,1.68e-10,93;UBERON:0001434,5.81e-10,100;UBERON:0002050,3.35e-09,564;UBERON:0000926,1.73e-08,315;UBERON:0004120,1.73e-08,315;UBERON:0006603,1.73e-08,315;UBERON:0000923,3.02e-08,560;UBERON:0010316,3.02e-08,560;UBERON:0005291,3.02e-08,560;UBERON:0006598,3.02e-08,560;UBERON:0010317,3.02e-08,560;UBERON:0002532,3.02e-08,560;UBERON:0004237,6.57e-08,10;UBERON:0004695,6.57e-08,10;UBERON:0002111,6.57e-08,10;UBERON:0004178,6.57e-08,10;UBERON:0005423,7.89e-08,581;UBERON:0007500,2.56e-07,59;UBERON:0001981,2.56e-07,59;UBERON:0004537,2.56e-07,59;UBERON:0006965,2.56e-07,59;UBERON:0000922,5.58e-07,592 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.982935746006035,0,0.873765488520689,0.263766978228454,0,0,131.103403558096,165.13830067857,124.152715365853,162.969554796029,0,0,0,0,0,0,0,0,0,13.7677496897116,20.3429580991523,26.6283732103651,247.324309384831,93.976246658814,233.68453442541,0,0,0.880801318004542,130.742916413523,96.0607903381979,65.7542938269031,0.223915474239924,0,0.257575567634187,6.39752250630085,4.91238726795452,9.94594650870046,178.737929380471,157.066133224337,375.673827895761,642.704804447684,468.261771535196,1695.81407053104,1465.51388881137,1372.30043729921,2012.43759079192,41.9780417180008,77.2324404663703,335.736885760956,2992.58221571031,2754.85476842119,4034.21726379195,22.10003711251,34.108285453299,56.2616670703156,4719.0924293394,4556.67073949454,8384.43311597843,60.5509283268751,90.2165448866948,235.649896505052,1956.04579300841,4970.27497528817,8881.83336591586,0.422510572623884,2.55125159958052,1.04829322754188,0.112328631146495,0.750884464207532,1.44653028027372,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.70763890732835,4.69789751496751,1.14681968437569,3.96513985737078,175.999688776202,0,0,0.786021525498329,0.411202997999018,0,0,0,0,3.7879555340959,0,0,0,1.40900451698243,2.60118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0.283604451492204,0.221729397462564,0.966182642624386,1.83370705696798,41.5296628653498,22.2470665670658,3.8945687238562,3.30846500868608,1.32957960518865,16.9328343256793,8.00792875092179,6.68623502393217,0.39752481473341,0,0.694281003215189,0,1.25849830862972,0.825354125820202,0.417989933073621,1.03366703667732,2.49036383880697,1.67360306382335,0,0,0.488124115096339,1.10298924103761,4.86085168729056,0.267899184852239,0.673588117878509,0.225222960966644,1.53316637465883,0,0.732806975721629,222.708905466947,263.690579620861,33.5792420149751,0.993943903390637,6.07826455989983,47.5348959119456,6.59724227722272,5.32002573297536,2.24271040056923,65.11688739512,10.853372130355,0,10.6421430935054,0.490385709340376,0,0,0,0,2.85235910772225,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,9.41487120228174,0,0.213557388818567,0.211931901159562,0,0.412210116953756,0,0,0,0,0,0,0,0,0,0,382.849750116491,1016.52479144204,697.221971390668,0,0,0.464775771478074,0.725627385107593,0.504641701751257,0,6.25798129319264,0,0,0,0,0.828147600278907,0.842923450390509,0.723033089650446,0.772057809126758,0.217879444092406,0.474541238222193,1.61797569792197,0.588664395376038,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0.343135620597051,275.802467231876,454.103083160783,348.533947351124,334.98499458356,0,1.03993478527958,2.88662684050547,1.04337364477569,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.492434012174795,5.85010662848094,2.52672975890838,1063.87901574992,586.929555926815,1019.22117407552,165.235474386755,309.234510578856,13.0350110916172,8.37527504423104,4.0502279646084,0.829312462163088,1.00883967391873,1.2624243342638,0.380987365753014,0,0,3.4214489204541,0,0,0,0,0,0,23.5274522679156,0,0,0,0,0,0,0,1.85871391755592,0,0,0,1.06617584622764,2.37585561880029,20.7993170171114,47.0628067644159,9.69738014465953,2.43247561282381,1.50677127429638,2.10833939483032,0.479249710983165,0,0,0.289562613335158,0,0,0,3.74358444383662,0,2.82354679815446,0.254094624222463,0,0,0,0,11.9841123831549,0,18.2342825911856,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0.184369168541703,0.173767228936166,0,0,2.48121631347465,32.1414159219739,89.5444209970898,0.909382714338778,0,2.11673205330776,2.23297027036899,0.306923946576125,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,3.55123450626254,0.98552587216571,44.1366264806078,0.581051892299796,0,363.718737130159,76.1509778499863,0.803701137152247,0,0.524497659837696,0.451199612907412,1.46329140498388,0,0,1.16106791782163,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,1.23649213977267,0,0,376.718192925489,221.020483652417,1.6068392984416,4.25351160485337,0,0,0.413509717453592,0.107420244868274,0,1.02271952899321,0,453.045953004441,224.670188749809,912.686119761266,42.1827946167643,41.3712538874584,54.1477236548701,84.3415096894326,16.6338133295088,49.504460819483,105.261892041084,89.6969220462973,79.2911872550631,0,0.316379424718726,0.190630193923825,0,0,3.18203247925937,107.537963707295,0.179872457583315,0,0.117812402345686,35.9884817200503,3.17020642346017,169.767157864309,0,188.877954464245,96.1416335486474,0.136499911407986,2.12108147930569,1.13008116620243,11.5786722144686,107.477113989078,89.4439805917676,0,0,55.3945329108182,22.307291863182,5.63391205064483,0.430234056612155,0.0982490410131212,57.7807103399625,0,2.32218398827431,0,0,0,441.563275297375,95.1829231260818,256.982724272721,2.82431402330337,84.3790530435611,116.245318210662,38.5784233576908,539.160820285734,0,0,0,0,0,0.648473311192717,1.08006287447623,0,0,0,39.6965149889271,0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| ||
|short_description=p1@IL1A | |short_description=p1@IL1A | ||
}} | }} |
Latest revision as of 09:42, 16 September 2015
Short description: | p1@IL1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL1A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 89bp_to_ENST00000263339_5end |
EntrezGene: | IL1A |
HGNC: | 5991 |
UniProt: | P01583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.16e-21 | 72 |
defensive cell | 2.43e-20 | 48 |
phagocyte | 2.43e-20 | 48 |
classical monocyte | 4.46e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-20 | 42 |
macrophage dendritic cell progenitor | 8.63e-19 | 61 |
granulocyte monocyte progenitor cell | 1.48e-18 | 67 |
monopoietic cell | 2.17e-17 | 59 |
monocyte | 2.17e-17 | 59 |
monoblast | 2.17e-17 | 59 |
promonocyte | 2.17e-17 | 59 |
myeloid lineage restricted progenitor cell | 1.16e-16 | 66 |
vascular associated smooth muscle cell | 2.39e-12 | 32 |
myeloid cell | 1.70e-10 | 108 |
common myeloid progenitor | 1.70e-10 | 108 |
endo-epithelial cell | 6.69e-10 | 42 |
leukocyte | 1.12e-09 | 136 |
aortic smooth muscle cell | 6.57e-08 | 10 |
smooth muscle cell | 2.15e-07 | 43 |
smooth muscle myoblast | 2.15e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.09e-07 | 14 |