FFCP PHASE1:Hg19::chr2:242088856..242088914,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23178 | |EntrezGene=23178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17270 | |HGNC=17270 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9F1,C9J1Z3,F8WEB4,C9J4R3,B7Z7V7,Q96RG2,Q05BE4 | |UniProt=G5E9F1,C9J1Z3,F8WEB4,C9J4R3,B7Z7V7,Q96RG2,Q05BE4 | ||
|association_with_transcript=0bp_to_ENST00000403638,ENST00000415234,ENST00000437780,ENST00000452907,ENST00000539818,uc002wao.1,uc002waq.2,uc010fzl.1,uc010zom.1,uc010zon.1_5end | |association_with_transcript=0bp_to_ENST00000403638,ENST00000415234,ENST00000437780,ENST00000452907,ENST00000539818,uc002wao.1,uc002waq.2,uc010fzl.1,uc010zom.1,uc010zon.1_5end | ||
|cluster_id=chr2:242088856..242088914,- | |||
|description=CAGE_peak_1_at_PASK_5end | |description=CAGE_peak_1_at_PASK_5end | ||
|id=chr2:242088856..242088914,- | |id=chr2:242088856..242088914,- | ||
|ontology_enrichment_celltype=CL:0000542!2.21e-14!53;CL:0000051!2.21e-14!53;CL:0000838!8.47e-14!52;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0000945!3.58e-07!24;CL:0000826!3.58e-07!24 | |ontology_enrichment_celltype=CL:0000542!2.21e-14!53;CL:0000051!2.21e-14!53;CL:0000838!8.47e-14!52;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25;CL:0000945!3.58e-07!24;CL:0000826!3.58e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.75e-08;53!CL:0000084;1.67e-07;25!CL:0000945;5.45e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.25e-14,53;CL:0000051,2.25e-14,53;CL:0000838,8.75e-14,52;CL:0000084,1.36e-07,25;CL:0000827,1.36e-07,25;CL:0000945,3.48e-07,24;CL:0000826,3.48e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.75e-08;53 | |||
|ontology_enrichment_disease=DOID:162!4.29e-21!235;DOID:14566!8.55e-20!239;DOID:2531!1.19e-17!51;DOID:0060083!1.19e-17!51;DOID:1240!1.97e-14!39;DOID:0050686!6.69e-13!137;DOID:8692!7.64e-11!31;DOID:0050687!3.99e-10!143;DOID:305!1.82e-08!106 | |ontology_enrichment_disease=DOID:162!4.29e-21!235;DOID:14566!8.55e-20!239;DOID:2531!1.19e-17!51;DOID:0060083!1.19e-17!51;DOID:1240!1.97e-14!39;DOID:0050686!6.69e-13!137;DOID:8692!7.64e-11!31;DOID:0050687!3.99e-10!143;DOID:305!1.82e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.48e-12;39!DOID:2531;7.53e-11;51!DOID:0060083;7.53e-11;51!DOID:8692;1.75e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.75e-21,235;DOID:14566,1.10e-19,239;DOID:2531,7.73e-18,51;DOID:0060083,7.73e-18,51;DOID:1240,1.15e-14,39;DOID:0050686,7.70e-13,137;DOID:8692,5.20e-11,31;DOID:0050687,6.27e-10,143;DOID:305,2.59e-08,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PASK | |short_description=p1@PASK | ||
}} | }} |
Latest revision as of 09:41, 16 September 2015
Short description: | p1@PASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PASK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403638, ENST00000415234, ENST00000437780, ENST00000452907, ENST00000539818, uc002wao.1, uc002waq.2, uc010fzl.1, uc010zom.1, uc010zon.1_5end |
EntrezGene: | PASK |
HGNC: | 17270 |
UniProt: | G5E9F1C9J1Z3F8WEB4C9J4R3B7Z7V7Q96RG2Q05BE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.25e-14 | 53 |
common lymphoid progenitor | 2.25e-14 | 53 |
lymphoid lineage restricted progenitor cell | 8.75e-14 | 52 |
T cell | 1.36e-07 | 25 |
pro-T cell | 1.36e-07 | 25 |
lymphocyte of B lineage | 3.48e-07 | 24 |
pro-B cell | 3.48e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.75e-21 | 235 |
disease of cellular proliferation | 1.10e-19 | 239 |
hematologic cancer | 7.73e-18 | 51 |
immune system cancer | 7.73e-18 | 51 |
leukemia | 1.15e-14 | 39 |
organ system cancer | 7.70e-13 | 137 |
myeloid leukemia | 5.20e-11 | 31 |
cell type cancer | 6.27e-10 | 143 |
carcinoma | 2.59e-08 | 106 |