FFCP PHASE1:Hg19::chr16:30751943..30751952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10847 | |EntrezGene=10847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16974 | |HGNC=16974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000483578_5end | |association_with_transcript=-35bp_to_ENST00000483578_5end | ||
|cluster_id=chr16:30751943..30751952,+ | |||
|coexpression_cluster_id=C2370 | |||
|description=CAGE_peak_11_at_SRCAP_5end | |description=CAGE_peak_11_at_SRCAP_5end | ||
|id=chr16:30751943..30751952,+ | |id=chr16:30751943..30751952,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.34e-37!254;CL:0002076!1.22e-21!43;CL:0000223!2.12e-14!59;CL:0002368!7.09e-12!13;CL:0002202!1.50e-08!9;CL:0002632!1.50e-08!9;CL:0000076!2.04e-08!62;CL:0002251!3.43e-08!21 | |ontology_enrichment_celltype=CL:0000066!4.34e-37!254;CL:0002076!1.22e-21!43;CL:0000223!2.12e-14!59;CL:0002368!7.09e-12!13;CL:0002202!1.50e-08!9;CL:0002632!1.50e-08!9;CL:0000076!2.04e-08!62;CL:0002251!3.43e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.72e-22;13!CL:0002202;2.40e-21;9!CL:0002632;2.40e-21;9!CL:0002159;1.51e-16;14!CL:0002076;2.29e-12;42!CL:0000349;3.18e-12;19!CL:0002577;1.97e-11;3!CL:0002328;1.45e-10;3!CL:0002166;4.77e-10;3!CL:0000307;4.77e-10;3!CL:0000575;9.21e-08;2!CL:0002536;1.63e-07;2!CL:0000317;5.34e-07;2!CL:1000448;5.34e-07;2!CL:0002308;5.34e-07;2!CL:0002140;5.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.57e-23,253;CL:0002368,3.92e-23,13;CL:0002202,8.21e-22,9;CL:0002632,8.21e-22,9;CL:0002076,8.47e-18,42;CL:0002159,1.53e-16,14;CL:0000349,2.09e-12,19;CL:0000223,1.01e-11,58;CL:0002577,1.86e-11,3;CL:0002328,8.03e-11,3;CL:0000068,3.10e-10,3;CL:0000069,3.10e-10,3;CL:0000307,3.10e-10,3;CL:0000377,3.10e-10,3;CL:0002166,3.51e-10,3;CL:0000575,6.65e-08,2;CL:0002536,8.68e-08,2;CL:0002077,2.59e-07,34;CL:0000317,7.77e-07,2;CL:1000448,7.77e-07,2;CL:0002308,7.77e-07,2;CL:0002140,7.77e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;4.77e-10;3 | |||
|ontology_enrichment_disease=DOID:305!8.81e-14!106;DOID:1749!2.13e-11!14;DOID:0050687!2.18e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.16e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.78e-14!169;UBERON:0000925!5.78e-14!169;UBERON:0006595!5.78e-14!169;UBERON:0001004!1.84e-13!72;UBERON:0000464!4.18e-11!104;UBERON:0005178!1.48e-10!34;UBERON:0002224!1.48e-10!34;UBERON:0005631!4.54e-10!14;UBERON:0000158!4.54e-10!14;UBERON:0005181!4.77e-10!35;UBERON:0000065!8.14e-10!53;UBERON:0005153!4.08e-09!37;UBERON:0000466!6.16e-09!126;UBERON:0005911!6.30e-09!82;UBERON:0007196!2.10e-08!14;UBERON:0001558!2.10e-08!14;UBERON:0001007!2.35e-08!155;UBERON:0001555!2.35e-08!155;UBERON:0007026!2.35e-08!155;UBERON:0006554!4.40e-08!44;UBERON:0005157!5.22e-08!51;UBERON:0005177!7.50e-08!107;UBERON:0001008!9.60e-08!45;UBERON:0008947!1.18e-07!38;UBERON:0003258!1.18e-07!38;UBERON:0000077!1.84e-07!130;UBERON:0003124!2.82e-07!7;UBERON:0009569!6.24e-07!113;UBERON:0000995!9.20e-07!21;UBERON:0000915!9.63e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.02e-12;15!UBERON:0001558;3.02e-12;15!UBERON:0000305;5.58e-11;7!UBERON:0005631;1.27e-10;10!UBERON:0000158;1.27e-10;10!UBERON:0004815;1.45e-10;3!UBERON:0002031;1.45e-10;3!UBERON:0000478;2.59e-09;24!UBERON:0001987;1.18e-08;4!UBERON:0001708;1.24e-07;4!UBERON:0008895;1.24e-07;4!UBERON:0006554;2.63e-07;30!UBERON:0001008;2.63e-07;30!UBERON:0002419;5.34e-07;2!UBERON:0007771;5.34e-07;2!UBERON:0003297;5.34e-07;2!UBERON:0001821;5.34e-07;2!UBERON:0003487;5.34e-07;2!UBERON:0001820;5.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.75e-17,14;UBERON:0000158,1.75e-17,14;UBERON:0007196,1.63e-12,15;UBERON:0001558,1.63e-12,15;UBERON:0000305,2.21e-11,7;UBERON:0004815,8.03e-11,3;UBERON:0002031,8.03e-11,3;UBERON:0004871,6.48e-10,8;UBERON:0000478,1.88e-09,24;UBERON:0006554,5.98e-09,47;UBERON:0001008,1.06e-08,48;UBERON:0001987,1.13e-08,4;UBERON:0004340,1.13e-08,4;UBERON:0003124,6.41e-08,7;UBERON:0001708,9.86e-08,4;UBERON:0008895,9.86e-08,4;UBERON:0002419,7.77e-07,2;UBERON:0007771,7.77e-07,2;UBERON:0003297,7.77e-07,2;UBERON:0001821,7.77e-07,2;UBERON:0003487,7.77e-07,2;UBERON:0001820,7.77e-07,2;UBERON:0005089,7.77e-07,2;UBERON:0005088,7.77e-07,2;UBERON:0000995,8.27e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,5.58240934377942,1.96597234917155,3.69273769519835,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.8072355126695,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0.327447688744282,2.91436230634034,2.59549109949101,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,2.12586938479627,0.818238361772504,0.286804595389004,0,0.132529768321485,0.464775771478074,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.75600456653801,0,1.00528972411631,1.38882667737794,0,0,0,0,0,0.144366447761074,0.462985512576611,0,1.58040879591855,0,0,0,0.148631162288728,2.81201501960331,1.51183915378974,1.41775097242386,2.05984602216551,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0.260650843404249,0,0,0,0,0,6.97193414326397,9.98612637062982,3.93107381328584,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,1.20303882181971,0.368323955743585,0,0.546273504020151,0,0.902399225814824,0.616122696835318,0,0,0.105551628892876,0,0,0.647747748306418,0,0.270946437543853,1.00337954770971,1.27438136522519,4.15538004464362,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,1.98341898433174,0.384380134730212,2.67986696238627,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,1.92444225451024,1.34060455107157,2.17781969722645,0.376575203107117,4.3050537267123,0,3.10401107475673,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.90995587790152,1.18785872333055,1.84296421259539,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0,0.539210106883961,1.61119057208048,0,0.394573622547734,0,0,0,0,0,0.7812832832557,0.61221999997337,0,0.568967241427498,1.77977555204936,0.472775363535873,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.977826347298073,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,1.89898258075224,1.46909527343233,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,2.1045278718029,0,0,0.661983911750998,0,0,1.70765727617876,0.277349346026277,2.2562765983567,0.783939179315021,0.609414446062818,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0.586654148204409,0.320635281006135,0,0,0,0,0,0,0.49701014226173,0.942776138467182,1.08723364858891,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0.78602152549833,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0.857766365499703,2.08795433572169,0,0,0,0,0,0.219284049578707,0,0.771656153083659,0.168942440653073,0.256241518587947,1.0362910251936,0,0,1.36402216187572,0.398594520940089,1.14495775979091,0,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0.559518030877778,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0.550285795565037,0.231051332300676,0,0,0.198916222116275,0,0.20170506870352,0,0,0.327543835020193,1.03499260351932,0,0,0,0,0,0,0,0,1.53314913167514,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.472775363535873,0,0.156986185701028,0,0,0,1.72742072974897,2.38875843943525,0.0714765441766563,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,0,0,0,0,2.06196181689645,0,0,0.894843454382338,0,0.975343399858155,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,1.76447435857846,2.08627553391837,0.730336388246517,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.305966489225945,0.5344348105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| 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| ||
|short_description=p11@SRCAP | |short_description=p11@SRCAP | ||
}} | }} |
Latest revision as of 09:26, 16 September 2015
Short description: | p11@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SRCAP_5end |
Coexpression cluster: | C2370_Placental_Alveolar_Urothelial_Amniotic_renal_serous_amniotic |
Association with transcript: | -35bp_to_ENST00000483578_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.57e-23 | 253 |
respiratory epithelial cell | 3.92e-23 | 13 |
epithelial cell of tracheobronchial tree | 8.21e-22 | 9 |
epithelial cell of lower respiratory tract | 8.21e-22 | 9 |
endo-epithelial cell | 8.47e-18 | 42 |
general ecto-epithelial cell | 1.53e-16 | 14 |
extraembryonic cell | 2.09e-12 | 19 |
endodermal cell | 1.01e-11 | 58 |
placental epithelial cell | 1.86e-11 | 3 |
bronchial epithelial cell | 8.03e-11 | 3 |
duct epithelial cell | 3.10e-10 | 3 |
branched duct epithelial cell | 3.10e-10 | 3 |
tracheal epithelial cell | 3.10e-10 | 3 |
tracheoblast | 3.10e-10 | 3 |
epithelial cell of Malassez | 3.51e-10 | 3 |
corneal epithelial cell | 6.65e-08 | 2 |
amniotic epithelial cell | 8.68e-08 | 2 |
ecto-epithelial cell | 2.59e-07 | 34 |
sebum secreting cell | 7.77e-07 | 2 |
epithelial cell of sweat gland | 7.77e-07 | 2 |
epithelial cell of skin gland | 7.77e-07 | 2 |
acinar cell of sebaceous gland | 7.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.75e-17 | 14 |
membranous layer | 1.75e-17 | 14 |
tracheobronchial tree | 1.63e-12 | 15 |
lower respiratory tract | 1.63e-12 | 15 |
amnion | 2.21e-11 | 7 |
lower respiratory tract epithelium | 8.03e-11 | 3 |
epithelium of bronchus | 8.03e-11 | 3 |
somatic layer of lateral plate mesoderm | 6.48e-10 | 8 |
extraembryonic structure | 1.88e-09 | 24 |
urinary system structure | 5.98e-09 | 47 |
renal system | 1.06e-08 | 48 |
placenta | 1.13e-08 | 4 |
allantois | 1.13e-08 | 4 |
chorion | 6.41e-08 | 7 |
jaw skeleton | 9.86e-08 | 4 |
splanchnocranium | 9.86e-08 | 4 |
skin gland | 7.77e-07 | 2 |
epidermis gland | 7.77e-07 | 2 |
gland of integumental system | 7.77e-07 | 2 |
sebaceous gland | 7.77e-07 | 2 |
skin sebaceous gland | 7.77e-07 | 2 |
sweat gland | 7.77e-07 | 2 |
sweat gland placode | 7.77e-07 | 2 |
sebaceous gland placode | 7.77e-07 | 2 |
uterus | 8.27e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.16e-07 | 2 |