FFCP PHASE1:Hg19::chr2:113522177..113522228,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26877 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBE0,F5H0M5 | |||
|association_with_transcript=0bp_to_ENST00000435431,ENST00000481732,ENST00000541405_5end | |||
|cluster_id=chr2:113522177..113522228,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CKAP2L_5end | |||
|id=chr2:113522177..113522228,- | |||
|ontology_enrichment_celltype=CL:0000548!2.12e-12!679;CL:0000004!2.12e-12!679;CL:0000255!2.12e-12!679;CL:0000012!6.03e-12!682;CL:0000066!1.84e-10!254;CL:0002319!9.94e-08!25;CL:0000055!1.44e-07!180;CL:0000133!6.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.45e-08;25!CL:0000095;9.05e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.80e-11,253;CL:0002319,7.24e-08,25;CL:0000133,5.81e-07,59;CL:0000095,9.56e-07,17;CL:0000123,9.56e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.16e-58!235;DOID:14566!2.38e-57!239;DOID:0050687!1.90e-29!143;DOID:0050686!7.66e-27!137;DOID:305!2.83e-21!106;DOID:2531!3.52e-18!51;DOID:0060083!3.52e-18!51;DOID:1240!5.71e-15!39;DOID:8692!5.49e-11!31;DOID:7!8.74e-08!39;DOID:1115!4.67e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.63e-12;39!DOID:2531;1.21e-11;51!DOID:0060083;1.21e-11;51!DOID:8692;5.61e-11;31!DOID:0050687;7.79e-08;143!DOID:14566;4.47e-07;239!DOID:0050686;4.93e-07;137!DOID:1115;6.11e-07;20!DOID:305;7.89e-07;106!DOID:162;9.93e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.95e-58,235;DOID:14566,4.25e-57,239;DOID:0050687,2.65e-29,143;DOID:0050686,1.88e-26,137;DOID:305,3.37e-21,106;DOID:2531,1.50e-18,51;DOID:0060083,1.50e-18,51;DOID:1240,2.87e-15,39;DOID:8692,3.39e-11,31;DOID:7,4.96e-08,39;DOID:1115,6.31e-07,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,2.14100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0,2.94880723801811,0,6.55324116390517,5.53910654279752,1.23766352960047,0.662794751455832,2.6893005858071,0.602694528023977,2.19093027116212,4.87932798790507,4.92484232307152,3.4680117511523,2.19418305034661,40.0730381983479,31.3442433416905,32.2644583758643,33.8511387463424,37.3557681997253,43.0547973785825,0.786728553697808,0.383829398097213,0.77408061658038,8.27479102031034,4.819294700452,0.739508020333575,47.4873939557249,18.19766175839,8.80801318004542,1.10799081706375,4.21143339687298,2.82114131930607,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.256160706529101,0,0.689491361473237,0,2.70852973188684,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0,0,1.08594422352558,1.21079900526674,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,13.695972408304,0.196709770113833,0.786021525498329,0.616804496998528,2.84217042164153,0,0,0,10.6954038609767,0.294605907474837,0.443067789167242,0.812411591295047,10.247305578054,11.9654599755088,13.3194702728978,11.6067007470056,19.1270036585135,0,0,0,22.208631168723,0.383220493601921,0,0.253019692019503,1.27426165729639,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.403213486449465,1.06976078313403,0.144824403882799,2.43806866313962,8.71911117614727,6.26526553033299,34.6981586289184,1.50401373190767,4.63508860674636,16.7010048880731,2.43317435151318,25.6189354514624,10.4212816807405,11.6820264971858,3.07800827419625,1.09288586487763,7.78647329847302,0,0,0,0,0,0,5.16782259153433,4.30117297553062,1.04142150482278,1.13061588384802,2.93649605346934,7.42818713238182,6.89683389571475,1.55050055501597,4.62496141492723,6.35969164252873,1.61131726843659,0,2.68468263302986,6.98559852657151,2.43042584364528,22.7714307124403,25.8208778520095,30.742934171947,3.06633274931766,1.89853131913626,3.66403487860815,1.31780417436063,0,0.436094052142534,0.993943903390637,17.3483800980474,0.926864265692532,14.6286676581895,34.0481646910423,6.16745360156538,2.1349799145941,5.42668606517752,11.8260193451911,9.56445771694785,20.7596616954093,1.21085942115945,2.88087962239999,4.68642863667593,1.87296046098192,4.56377457235559,3.13842229158782,28.5365831704349,21.5291016009615,27.8092597270452,7.96201267894084,33.1652656741773,3.82305390350332,4.75201142912821,2.71993622206413,0,0.718618141816238,30.63717273964,41.914704157108,29.0917321258392,14.9252391099485,9.80760946556863,5.40857012063748,25.6356733941648,31.9313551526174,1.49490172172997,5.51022943014861,20.106103437655,12.7785136255664,5.41045134095821,2.23340227597908,33.586490116012,15.3950468154694,20.9520032622615,2.76149695926898,1.93975268182574,13.1353549231147,19.4451549579346,11.8692414617341,5.7978255948989,13.0918137883601,9.46455164783713,21.10145116042,19.6144057115798,17.4290914304278,18.4516677927359,19.681026368299,9.85438869504741,4.69348596989448,1.92972281457866,5.52539685409922,0,1.44375896333917,22.3599852075305,17.8699771482788,19.2808823906786,21.1764427646196,16.3409583069305,19.693461386221,15.7752630547392,14.1279454890249,15.0051391209092,2.95262181849859,2.80483547606892,0.8231480226628,0,0,0,0,31.3438800584402,12.1758554157682,8.23525489432923,3.95101027471052,1.1240175325762,27.3438804959636,19.7213388187668,3.25808305310325,3.11980435583874,7.21656710126366,9.97001482785661,1.76113041353732,3.17606185074362,1.85194205030644,6.27838702374174,8.69224837755203,3.43394464837949,1.47730203652438,6.78612368903789,15.4576408780277,1.87467667973554,5.03946384596579,10.3495820986942,51.2274749860292,51.1515731784573,22.6195780707475,43.354364934843,15.8487181223807,1.4512968087854,0.144119953416961,0.37872730027914,21.9702714250905,4.58386110669933,2.34434894420094,1.71072446022705,10.796886733849,12.6144084294445,3.71574362419752,8.63409349459278,3.48768055066624,45.1030457798843,0.646358578788889,0,21.1325688139,1.86156681609409,7.28052058379563,7.45901385360212,2.83698264046557,7.45982101245078,4.57529579706072,0,6.58592269424615,26.7103671120863,2.84313558994037,26.1344118068032,0,0,1.99945982364114,1.2162378064119,1.00451418286425,0,7.18874566474748,2.29723871668228,34.2328572097724,6.80472141337622,6.98619496671304,14.3248770591916,75.4333019076439,0.788123040807709,0.215627574859517,0.77005821767849,25.1553677980239,23.4251736943719,15.4657762555539,10.553524716064,17.2243462946354,0,0,0.414415513436035,0.613457458595699,1.00034104211935,0.813795071099207,1.66376689224646,8.74302045106093,3.6271555457805,9.01988895443892,0,0,3.10419213877515,27.2332495399529,9.40282759562686,21.4602527736165,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.960548020230999,4.54691357169389,4.99306318531491,11.7932214398575,0.248107807818777,5.37116906508219,0.561320188866147,0.256278298511402,2.04682899626681,0.321707842287215,0,40.7113591639011,11.7190738706664,35.4789313979655,23.8857037424466,19.7557643381931,7.97672367304707,1.00253235151642,0.0920809889358963,21.6999307031107,22.5793048328329,1.18011973463482,2.25599806453706,13.554699330377,6.27479815341484,0,10.9773694048591,3.4120015221269,2.55140557914773,19.8642642813968,3.08454505380579,3.25135725052623,0.501689773854853,6.37190682612596,2.49322802678617,3.35812132083267,93.84322720446,63.7902500500757,18.7208591334964,1.96808787419823,2.92840555197873,1.23649213977267,29.5769371363249,28.5482869725234,1.72279661398852,5.20048196829217,8.03419649220798,2.61010939388729,15.8670075628084,17.6529225935049,27.7051510693906,15.0388342815583,12.3264189827094,20.7100704621125,6.14321045962488,1.4875642382488,5.57351195358808,15.6963636368338,0.30347334256665,2.32422774648643,2.20368642781448,7.6674099717666,6.46870518369786,3.19383618190213,7.82939692867565,1.11194531462352,4.8662461492277,12.281226188869,13.6043152629052,2.85945290885737,1.02359116524534,0,4.13664222303718,5.49464048139461,9.53324025191568,9.05972198128981,12.1346774416057,2.42618977887979,0,3.79132610615083,4.38870365180631,2.92456187557541,3.16950440270266,9.14549406433505,3.25232493493539,4.52032466480971,6.06501877900737,4.64407282668854,0.876901770507525,0,1.9676842561399,2.63783490051515,7.74558745249375,9.01425928103173,30.2597953150549,2.84922218938051,2.85336841185,20.5761417160947,1.47775344708365,2.96365403663912,6.45104395401716,5.24902080367474,7.69776901804097,3.35151137767894,0,1.22386941009813,0,0,0.886860307073351,4.59446800413919,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0.79312517629427,23.714943790299,6.73735898684351,64.9356572349734,31.4007365962465,42.5594178280512,72.9915312754729,36.0303376367138,29.9369057149225,13.2138705391333,28.5759336677242,10.0632801485112,12.6358730151056,12.7811420258588,14.5712303068912,5.01268954180134,12.0197162239138,25.2123277912808,15.5385774537107,23.4215430729679,25.7629008566824,28.5733910806866,25.7227524076278,24.0262764065148,32.8252000275428,32.8519285196386,38.1570936737908,22.9887326704586,82.6018480634594,56.3948020351398,30.8781891673563,1.61158997199083,26.4565937413939,65.3058231866023,40.0631966997042,0.71623345421307,18.114845530791,0.307160702099232,0,0.140669416410513,5.00889172603077,18.9524455360774,34.2023161167349,0.597743964753209,10.7750727057148,8.31378067919111,51.2366099335796,19.6935688737711,2.48831670129446,47.1808843523466,3.9384658428634,27.1133356220242,0.394573622547734,0,41.1206863535157,0,0.185536196323703,0,14.0630990986026,10.3202799995511,2.17499872630438,15.1345286219715,25.6796186795694,27.1845834033127,20.6846023944879,35.2841582193738,34.2041240018586,0,0.241192877250816,0,0.663475559587348,0,0,20.9161849956461,16.4520018248752,1.07730361905316,6.95046540666707,10.1448117930746,14.181707816744,9.66961610105872,0.957003479195758,6.50342913153222,0.533034776018635,26.5702575308915,17.7387689726378,37.8962634732357,22.1083747404837,28.2330049417545,29.5365993077483,21.2524180651087,44.8201152724668,37.1356593569328,21.7099634851666,18.7999585007141,32.6746846010558,1.99052386215701,1.85760885457012,8.55442202907076,27.8729860959785,16.5575678188314,17.8561533654329,0.067401132980677,3.21031058919516,0.234264445725339,15.8735666617629,35.0239667888441,7.52619176555688,0.394584402849391,4.83962864194656,3.97894590119637,6.57140428136275,16.2349292967652,16.0716696665733,13.2930774541437,8.93678280863847,7.53439004177341,9.55779438183671,0.569219092059585,16.0862620695241,12.1491816834592,42.5287004778399,46.4025571073546,1.7472666824203,40.7606896957731,22.1571998652005,30.9898704445427,19.3792478645574,4.36450574197887,3.88326957442601,1.12990370390266,34.9456907849215,74.5179793886211,0.253243183823515,30.1149129411597,18.9976403996135,0.213452994739353,12.9876246228385,6.91634002339709,21.761953271524,13.5560048310952,0.864328787928898,10.8099705941926,17.9127466308765,30.8502547787104,27.301342887519,39.4733102252565,23.404997782023,0,0.547621515567972,1.27746588066972,21.0585066295779,17.8763400909934,0.558564802544508,0.229160424011684,0.717873024576814,9.18523402295359,0,0.223171457441873,6.31524641375227,4.68389848605125,27.9590278865889,26.9438483490705,28.3510552831213,29.3879451204246,5.80722140937018,24.4705929670117,0,0.408610218334727,12.0564861348764,13.7539436597234,12.0477698028464,2.92466059016951,1.5476039091159,0.182248669974074,12.7465181287721,0.551639951094387,1.41627387964495,2.32320740342694,1.79287339332845,39.7264458451252,2.85878130549347,0,44.2427255519265,0,0.864221491201268,7.51150928251641,17.9595287343731,37.8446520654453,17.0388021785422,36.3731813779603,0.146552233678082,6.62534444561107,0,0.13223260174269,10.7784707867128,6.34333520085005,1.81538601365081,3.61569901729232,1.24271716604159,1.48849806543585,9.88058159489721,14.1279414121839,70.21753835472,0,0,0,0,10.8367326412662,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.248385611765534,27.1163324475012,53.3666341998195,24.7188061592886,5.13837600380941,8.23430368943601,31.846773594868,24.2018117780078,12.3881486396105,7.24511260526396,6.10286447652875,3.59865710022669,2.0125432140206,0,0.457680136793847,1.20984739010591,10.8806040407946,26.6139269981341,20.2306894297902,0.449803112163605,15.3710327307497,12.0264800273848,4.78515086204391,4.17396049449387,2.40412174395549,0.380805212168795,34.1771415891916,9.81982759693821,3.32972726831714,0.928067519756987,3.98095888698616,37.6026098783364,6.18112269329027,3.70424437642511,5.04739592914604,10.2088510115871,18.8708600409935,3.91491437947817,20.1768273705922,10.8815562932202,28.3894577227502,16.1179956973339,8.95524196766819,13.1570429747224,46.2925562378208,30.6733320850755,28.5512724703693,17.1681817453924,17.9623777700223,17.0161575459334,0.276516872303462,0,0,0,11.7939545584709,11.3055538026711,42.2624246717254,20.1987269813479,24.1123309108758,8.43853400337997,39.1586007961117,53.9430434237893,0.139879507719444,6.8428498603627,28.5204448007143,45.5020704093997,6.91970144165944,27.3024095480035,15.7851252857243,10.2035961648808,12.8893194829362,19.5525721290635,11.1301522728697,80.3601181562772,16.0114149657094,7.40619481750436,3.3687002508852,0.0642292250964595,0,0.638535436228605,0.41023272848151,7.81422258287326,0,0.322951291263702,0,9.81477185010256,34.5651289408879,24.9462893989483,32.6937635205457,20.594633155227,27.614397042404,12.1338895490928,0.225630985047772,26.8267741375682,0,14.1429615019968,29.3151732343073,22.6219811912079,0,0,0,0,19.6910931246559,0,0.496211178389294,12.8386008382523,10.4765190664468,0.535701835878287,1.00885116665647,0,0,2.7497734750418,24.3143713742694,46.6447385669778,0.135939465953663,0.131545547125698,24.2297373812135,32.9244949600525,0.078493092850514,0.628462359664008,7.84762057278609,27.3947616152849,19.0016280272387,21.4988259549173,0,27.3363548297617,30.5714948718169,53.3744895968919,2.40513409419076,6.63091725321718,4.4386804044427,0,0,19.879776122735,19.7695099041246,0,9.39338161030605,2.79185747097888,14.3330840846615,3.91494011292273,21.9856523298144,14.8739868478369,0,0.102662806856247,3.4794432940146,10.6856418473011,24.329704200059,33.2247794519485,7.72980590054196,30.4954421505192,29.9038205547567,25.5127205627678,2.62392137567012,9.83518022267808,1.41095188908457,0.490296643507811,4.71353094203252,0,0.297046400327086,5.0718687310008,19.3716910744111,2.16163011353663,2.96506284678455,18.7889373138866,17.3197320447488,16.2331640989218,2.00603416722921,3.65168194123259,0.917458566809082,0.143339583151451,24.9279068265232,0.135982980381829,6.10890966476528,4.2322147241232,10.0438654905023,2.77305377178851,7.35465155610441,25.3594513918509,29.8295011460889,36.4891682912939,16.3182127587171,21.1101750159793,17.184346213016,13.5382071217883,11.5941408273906,10.1826369459348,0,0.20686599172379,3.19850972851471,11.6651571417233,34.4258889425913,24.0849891467929,24.1083504548319,0.12729431655633,4.85081253499726,6.31378568901188,5.13349951627922,2.96349033264185,1.43444410785353,5.65522606128223,39.5619885449336,49.0945791037491,23.1686738744328,0.718601616852695,9.38563769613817,0.244482888365733,22.3792898073656,0,2.41528552309231,7.05250683067112 | |||
|short_description=p1@CKAP2L | |||
}} |
Latest revision as of 09:23, 16 September 2015
Short description: | p1@CKAP2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKAP2L_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000435431, ENST00000481732, ENST00000541405_5end |
EntrezGene: | CKAP2L |
HGNC: | 26877 |
UniProt: | F8WBE0F5H0M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.80e-11 | 253 |
neural cell | 7.24e-08 | 25 |
neurectodermal cell | 5.81e-07 | 59 |
neuron associated cell | 9.56e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.56e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.95e-58 | 235 |
disease of cellular proliferation | 4.25e-57 | 239 |
cell type cancer | 2.65e-29 | 143 |
organ system cancer | 1.88e-26 | 137 |
carcinoma | 3.37e-21 | 106 |
hematologic cancer | 1.50e-18 | 51 |
immune system cancer | 1.50e-18 | 51 |
leukemia | 2.87e-15 | 39 |
myeloid leukemia | 3.39e-11 | 31 |
disease of anatomical entity | 4.96e-08 | 39 |
sarcoma | 6.31e-07 | 20 |