FFCP PHASE1:Hg19::chr5:150838017..150838060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=206358 | |EntrezGene=206358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18761 | |HGNC=18761 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z2H8 | |UniProt=Q7Z2H8 | ||
|association_with_transcript=-284bp_to_AF516142_5end | |association_with_transcript=-284bp_to_AF516142_5end | ||
|cluster_id=chr5:150838017..150838060,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_7_at_SLC36A1_5end | |description=CAGE_peak_7_at_SLC36A1_5end | ||
|id=chr5:150838017..150838060,+ | |id=chr5:150838017..150838060,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.67e-11!3;CL:0000039!4.61e-10!7;CL:0000586!4.61e-10!7 | |ontology_enrichment_celltype=CL:0002541!8.67e-11!3;CL:0000039!4.61e-10!7;CL:0000586!4.61e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.07e-27;3!CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7!CL:0002097;3.52e-11;2!CL:0000174;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.06e-27,3;CL:0000039,2.24e-12,7;CL:0000586,2.24e-12,7;CL:0002097,3.35e-11,2;CL:0000174,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!6.50e-09!1;DOID:10165!6.50e-09!1;DOID:1798!6.50e-09!1 | |ontology_enrichment_disease=DOID:1799!6.50e-09!1;DOID:10165!6.50e-09!1;DOID:1798!6.50e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.54e-21;1!DOID:10165;2.54e-21;1!DOID:1798;2.54e-21;1!DOID:170;3.25e-14;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.30e-21,1;DOID:10165,2.30e-21,1;DOID:1798,2.30e-21,1;DOID:170,3.04e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0000160!4.94e-12!27;UBERON:0000476!8.67e-11!3;UBERON:0000920!8.67e-11!3;UBERON:0003124!7.28e-10!7;UBERON:0005409!3.58e-09!35;UBERON:0002146!1.84e-08!1;UBERON:0005623!1.84e-08!1;UBERON:0005631!1.89e-08!14;UBERON:0000158!1.89e-08!14;UBERON:0001301!2.84e-08!1;UBERON:0002108!4.06e-08!14 | |ontology_enrichment_uberon=UBERON:0000160!4.94e-12!27;UBERON:0000476!8.67e-11!3;UBERON:0000920!8.67e-11!3;UBERON:0003124!7.28e-10!7;UBERON:0005409!3.58e-09!35;UBERON:0002146!1.84e-08!1;UBERON:0005623!1.84e-08!1;UBERON:0005631!1.89e-08!14;UBERON:0000158!1.89e-08!14;UBERON:0001301!2.84e-08!1;UBERON:0002108!4.06e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.07e-27;3!UBERON:0000920;4.07e-27;3!UBERON:0002108;6.15e-17;4!UBERON:0000160;1.14e-10;17!UBERON:0005631;7.66e-09;10!UBERON:0000158;7.66e-09;10!UBERON:0005409;1.76e-08;22!UBERON:0002369;7.02e-08;3!UBERON:0001235;7.02e-08;3!UBERON:0006858;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.06e-27,3;UBERON:0002108,5.45e-17,4;UBERON:0003124,3.74e-12,7;UBERON:0000160,1.09e-10,17;UBERON:0002369,6.78e-08,3;UBERON:0001235,6.78e-08,3;UBERON:0006858,6.78e-08,3;UBERON:0005409,1.40e-07,25 | |||
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|short_description=p7@SLC36A1 | |short_description=p7@SLC36A1 | ||
}} | }} |
Latest revision as of 09:10, 16 September 2015
Short description: | p7@SLC36A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC36A1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -284bp_to_AF516142_5end |
EntrezGene: | SLC36A1 |
HGNC: | 18761 |
UniProt: | Q7Z2H8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.06e-27 | 3 |
germ line cell | 2.24e-12 | 7 |
germ cell | 2.24e-12 | 7 |
cortical cell of adrenal gland | 3.35e-11 | 2 |
steroid hormone secreting cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.06e-27 | 3 |
small intestine | 5.45e-17 | 4 |
chorion | 3.74e-12 | 7 |
intestine | 1.09e-10 | 17 |
adrenal gland | 6.78e-08 | 3 |
adrenal cortex | 6.78e-08 | 3 |
adrenal/interrenal gland | 6.78e-08 | 3 |
gastrointestinal system | 1.40e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.30e-21 | 1 |
endocrine pancreas cancer | 2.30e-21 | 1 |
pancreatic endocrine carcinoma | 2.30e-21 | 1 |
endocrine gland cancer | 3.04e-14 | 6 |