FFCP PHASE1:Hg19::chr3:158450447..158450473,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5918 | |EntrezGene=5918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9867 | |HGNC=9867 | ||
|TSSclassifier=strong | |||
|UniProt=P49788 | |UniProt=P49788 | ||
|association_with_transcript=11bp_to_ENST00000237696_5end | |association_with_transcript=11bp_to_ENST00000237696_5end | ||
|cluster_id=chr3:158450447..158450473,- | |||
|coexpression_cluster_id=C463 | |||
|description=CAGE_peak_4_at_RARRES1_5end | |description=CAGE_peak_4_at_RARRES1_5end | ||
|id=chr3:158450447..158450473,- | |id=chr3:158450447..158450473,- | ||
|ontology_enrichment_celltype=CL:0000187!1.57e-09!54;CL:0000680!3.41e-09!57;CL:0000056!3.41e-09!57;CL:0000355!3.41e-09!57;CL:0000222!4.82e-09!119;CL:0000183!6.04e-08!59;CL:0000393!1.15e-07!60;CL:0000211!1.15e-07!60 | |ontology_enrichment_celltype=CL:0000187!1.57e-09!54;CL:0000680!3.41e-09!57;CL:0000056!3.41e-09!57;CL:0000355!3.41e-09!57;CL:0000222!4.82e-09!119;CL:0000183!6.04e-08!59;CL:0000393!1.15e-07!60;CL:0000211!1.15e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000746;7.46e-09;3!CL:0000077;1.29e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,7.92e-09,3;CL:0000513,7.92e-09,3;CL:0000077,1.49e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000513;7.46e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.02e-10!347;UBERON:0000119!6.91e-10!312;UBERON:0007100!7.01e-10!27;UBERON:0007023!9.98e-10!115;UBERON:0002385!1.10e-09!63;UBERON:0001015!1.10e-09!63;UBERON:0000383!1.10e-09!63;UBERON:0000483!1.88e-09!309;UBERON:0000948!4.31e-09!24;UBERON:0005498!4.31e-09!24;UBERON:0004140!4.31e-09!24;UBERON:0009881!4.31e-09!24;UBERON:0004141!4.31e-09!24;UBERON:0003084!4.31e-09!24;UBERON:0007005!4.31e-09!24;UBERON:0004139!4.31e-09!24;UBERON:0004291!4.31e-09!24;UBERON:0005256!7.17e-09!143;UBERON:0001134!9.20e-09!61;UBERON:0002036!9.20e-09!61;UBERON:0003082!9.20e-09!61;UBERON:0000477!1.34e-08!286;UBERON:0000490!2.83e-08!138;UBERON:0003103!1.41e-07!69;UBERON:0004872!1.51e-07!84;UBERON:0004111!5.45e-07!241;UBERON:0004122!7.59e-07!15;UBERON:0001009!8.16e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.84e-09;5!UBERON:0002216;2.84e-09;5!UBERON:0011134;2.84e-09;5!UBERON:0002209;2.84e-09;5!UBERON:0002213;2.84e-09;5!UBERON:0007844;2.84e-09;5!UBERON:0011138;2.84e-09;5!UBERON:0001130;2.84e-09;5!UBERON:0001066;2.84e-09;5!UBERON:0001468;2.84e-09;5!UBERON:0004905;2.14e-08;8!UBERON:0000982;2.14e-08;8!UBERON:0004770;2.14e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004122,1.59e-10,15;UBERON:0011135,2.74e-09,5;UBERON:0002216,2.74e-09,5;UBERON:0011134,2.74e-09,5;UBERON:0002209,2.74e-09,5;UBERON:0002213,2.74e-09,5;UBERON:0005856,2.74e-09,5;UBERON:0005866,2.74e-09,5;UBERON:0005863,2.74e-09,5;UBERON:0007844,2.74e-09,5;UBERON:0011138,2.74e-09,5;UBERON:0001130,2.74e-09,5;UBERON:0001066,2.74e-09,5;UBERON:0001468,2.74e-09,5;UBERON:0000162,1.32e-08,14;UBERON:0001353,1.32e-08,14;UBERON:0000163,1.32e-08,14;UBERON:0006866,1.32e-08,14;UBERON:0000164,1.32e-08,14;UBERON:0000931,1.32e-08,14;UBERON:0004905,2.15e-08,8;UBERON:0000982,2.15e-08,8;UBERON:0004770,2.15e-08,8;UBERON:0003064,7.08e-08,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,2.22779435328084,2.98257638155124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,10.0605128955545,1.2786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.14734648299525,0.354668382198357,0.560677600142307,1.06748995729705,0,1.24484414159907,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,2.87447256726495,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0.939269553886573,0,0.462985512576611,0.951270761172991,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0,0.775630294546667,0,0,0,0,0,0,0,1.42977993658148,0.542621605391443,0,0,2.13235169245527,0,17.7849232465156,7.84380112740265,31.6914382047121,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27573414392302,4.50153468953709,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0,0,0.184161977871793,2.06666006696292,0.546273504020151,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,6.88830755969382,4.55529752530024,2.36994326789761,0,0,0,0,20.8889108797407,0.193341436584244,0.308097234229289,0.15350367472613,0,1.39646318328756,0.870100163485371,0.596586391912706,0.623224249527161,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0,0.632758849437452,2.2875623270859,0.255897791311334,0.855877976067841,0.636406495851874,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0,0,5.36169677188826,0,1.63799893689583,2.12108147930569,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,3.9353685122798,0,0.6196469961995,0,0.143411352204052,0.589494246078727,0,0,0,1.31717957183961,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.296964680832639,0,0,0,0.222617410045812,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,1.61119057208048,0,2.86065876347107,0,0,0,0,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,1.38510465306835,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39591143470369,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,2.23074737923365,0.0882561266915003,1.12990370390266,0,0,0,0.195551382734803,4.00794101257669,0.426905989478705,2.39771531498556,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0.429226048136571,8.9268582976749,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,0.367182116944987,0,0,0,0.714695326373367,5.29673576292345,0,0.542999601753713,0,0.326587360109409,0,0,0,0.566560457600628,0,0,0.129282956361551,0,0,0.704815022316672,1.81538601365081,3.61569901729232,0,0,0,0,0,0,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0.149254802886874,0.467426619694449,0,0,0.251567901752575,0.889811221596536,0,0.453692771289717,0.15543720058278,0,0.477890301491107,0,1.55262956876259,0,0,1.04349012362347,8.41442610384423,9.52013030421988,0.406870733204662,0,3.22231671127465,0.464033759878494,0.796191777397232,0,0,0,0,0,21.6586007288675,1.04397716786085,0.226705925512272,0,0,0,0.308801447160972,15.5691675200882,0.176689145945881,5.59450710985653,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,3.91093707416138,0,0,0,1.80149109261106,1.47856086217045,0.0675375846183947,0,0,0.19024743058172,0,0,0.992422356778588,0,0.894336993477167,0,1.00885116665647,0,0.682986574053893,0.177404740325278,0,0,0.0679697329768317,0,0,0,2.74725824976799,0,0,0,0,0,1.1436247068265,0,0,0,1.60342272946051,0,0,0,0,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.980593287015622,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0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| ||
|short_description=p4@RARRES1 | |short_description=p4@RARRES1 | ||
}} | }} |
Latest revision as of 09:04, 16 September 2015
Short description: | p4@RARRES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RARRES1_5end |
Coexpression cluster: | C463_Mesothelial_mesothelioma_Sertoli_mesenchymal_vagina_Cardiac_Fibroblast |
Association with transcript: | 11bp_to_ENST00000237696_5end |
EntrezGene: | RARRES1 |
HGNC: | 9867 |
UniProt: | P49788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 7.92e-09 | 3 |
cardiac muscle myoblast | 7.92e-09 | 3 |
mesothelial cell | 1.49e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
genitourinary system | 1.59e-10 | 15 |
intervertebral cartilage | 2.74e-09 | 5 |
symphysis | 2.74e-09 | 5 |
nonsynovial joint | 2.74e-09 | 5 |
fibrous joint | 2.74e-09 | 5 |
cartilaginous joint | 2.74e-09 | 5 |
developing mesenchymal condensation | 2.74e-09 | 5 |
pre-cartilage condensation | 2.74e-09 | 5 |
cartilaginous condensation | 2.74e-09 | 5 |
cartilage element | 2.74e-09 | 5 |
post-cranial axial skeletal system | 2.74e-09 | 5 |
vertebral column | 2.74e-09 | 5 |
intervertebral disk | 2.74e-09 | 5 |
intervertebral joint | 2.74e-09 | 5 |
cloaca | 1.32e-08 | 14 |
anal region | 1.32e-08 | 14 |
embryonic cloaca | 1.32e-08 | 14 |
terminal part of digestive tract | 1.32e-08 | 14 |
primitive urogenital sinus | 1.32e-08 | 14 |
proctodeum | 1.32e-08 | 14 |
articulation | 2.15e-08 | 8 |
skeletal joint | 2.15e-08 | 8 |
articular system | 2.15e-08 | 8 |
intermediate mesoderm | 7.08e-08 | 28 |