FFCP PHASE1:Hg19::chr2:241807870..241807881,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |||
|TSSclassifier=strong | |||
|UniProt=P21549 | |||
|association_with_transcript=-14bp_to_ENST00000307503_5end | |||
|cluster_id=chr2:241807870..241807881,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_AGXT_5end | |||
|id=chr2:241807870..241807881,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.77e-33!12;CL:0000417!6.77e-33!12;CL:0000668!6.77e-33!12;CL:0000414!6.77e-33!12;CL:0000412!6.77e-33!12;CL:0000182!6.77e-33!12;CL:0000223!1.38e-08!59;CL:0002535!8.52e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.33e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.00e-09;11!UBERON:0009497;8.89e-08;13 | |||
|ontology_enrichment_disease=DOID:178!2.75e-12!1;DOID:326!2.75e-12!1;DOID:3978!2.75e-12!1;DOID:3394!2.75e-12!1;DOID:5844!2.75e-12!1;DOID:114!9.02e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.66e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.28e-36!19;UBERON:0006925!1.28e-36!19;UBERON:0008836!1.28e-36!19;UBERON:0008835!1.59e-31!22;UBERON:0003894!1.59e-31!22;UBERON:0009854!4.02e-30!23;UBERON:0007499!1.19e-27!25;UBERON:0009497!1.19e-27!25;UBERON:0000015!1.19e-27!25;UBERON:0002423!1.19e-27!25;UBERON:0006235!1.19e-27!25;UBERON:0004161!1.19e-27!25;UBERON:0005057!1.47e-26!26;UBERON:0009856!1.47e-26!26;UBERON:0002365!3.78e-22!31;UBERON:0002330!3.78e-22!31;UBERON:0002368!1.59e-19!35;UBERON:0003929!1.30e-15!54;UBERON:0005172!2.86e-15!55;UBERON:0005173!2.86e-15!55;UBERON:0000949!5.34e-15!45;UBERON:0002417!1.16e-13!61;UBERON:0000916!1.16e-13!61;UBERON:0002530!3.13e-11!59;UBERON:0005911!6.72e-10!82;UBERON:0005177!2.68e-07!107;UBERON:0009569!7.55e-07!113;UBERON:0006955!8.52e-07!2;UBERON:0004801!8.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.69e-29;19!UBERON:0006925;2.69e-29;19!UBERON:0002423;2.38e-22;25!UBERON:0002365;4.91e-18;31!UBERON:0002330;4.91e-18;31!UBERON:0002368;1.30e-15;33!UBERON:0000949;2.30e-11;43!UBERON:0005172;3.04e-08;52!UBERON:0005173;3.04e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0000949,1.54e-12,45;UBERON:0003929,1.77e-10,54;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002530,1.33e-09,59;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0005911,6.18e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,2.95394953340702,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3707013745959,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88126918544609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@AGXT | |||
}} |
Latest revision as of 08:57, 16 September 2015
Short description: | p7@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AGXT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -14bp_to_ENST00000307503_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | P21549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.20e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
endocrine system | 1.54e-12 | 45 |
gut epithelium | 1.77e-10 | 54 |
abdomen element | 1.77e-10 | 54 |
abdominal segment element | 1.77e-10 | 54 |
gland | 1.33e-09 | 59 |
abdominal segment of trunk | 1.92e-09 | 60 |
abdomen | 1.92e-09 | 60 |
endo-epithelium | 6.18e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.66e-07 | 14 |