FFCP PHASE1:Hg19::chr13:102105055..102105060,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:102105055..102105060,+ to FFCP PHASE1:Hg19::chr13:102105055..102105060,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTP1 | |UniProt=B3KTP1 | ||
|association_with_transcript=37bp_to_ENST00000545560_5end | |||
|cluster_id=chr13:102105055..102105060,+ | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_7_at_ITGBL1_5end | |||
|id=chr13:102105055..102105060,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.24e-31!75;CL:0000055!1.32e-27!180;CL:0002620!3.93e-13!23;CL:0002334!1.47e-11!12;CL:0000048!6.85e-10!430;CL:0000723!2.79e-09!436;CL:0000034!1.66e-08!444;CL:0002320!1.52e-07!365;CL:0000134!8.05e-07!358;CL:0000499!9.62e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.63e-15;23!CL:1000306;1.22e-10;4!CL:0002547;1.22e-10;4!CL:0002334;1.22e-10;12!CL:0000057;1.71e-10;73!CL:0000136;1.40e-09;13!CL:0002615;2.68e-09;3!CL:0002580;2.79e-09;3!CL:0002579;5.49e-09;3!CL:0000515;9.99e-09;3!CL:0000135;1.80e-08;3!CL:0000388;1.80e-08;3!CL:0000197;1.69e-07;6!CL:0000098;1.69e-07;6!CL:0002167;1.69e-07;6!CL:0002617;9.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.10e-29,76;CL:0002620,4.24e-15,23;CL:0000136,1.02e-12,15;CL:0002334,1.22e-10,12;CL:1000306,1.72e-10,4;CL:0002547,1.72e-10,4;CL:0000048,2.39e-10,427;CL:0000723,5.47e-10,433;CL:0000034,1.59e-09,441;CL:0002615,2.36e-09,3;CL:0002580,3.08e-09,3;CL:0002579,4.97e-09,3;CL:0000134,8.75e-09,354;CL:0000135,1.59e-08,3;CL:0000388,1.59e-08,3;CL:0002320,2.33e-08,361;CL:0000197,2.08e-07,6;CL:0000098,2.08e-07,6;CL:0002167,2.08e-07,6;CL:0000219,6.93e-07,386;CL:0002617,9.16e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.53e-08;5!DOID:450;7.53e-08;5!DOID:66;7.53e-08;5!DOID:423;7.53e-08;5!DOID:0080000;7.53e-08;5!DOID:11722;7.53e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.94e-08,5;DOID:450,6.94e-08,5;DOID:66,6.94e-08,5;DOID:423,6.94e-08,5;DOID:0080000,6.94e-08,5;DOID:11722,6.94e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.79e-10!95;UBERON:0002199!2.33e-08!45;UBERON:0002416!2.33e-08!45;UBERON:0003688!2.37e-08!6;UBERON:0002358!2.37e-08!6;UBERON:0003684!2.37e-08!6;UBERON:0001178!2.37e-08!6;UBERON:0000914!2.55e-08!83;UBERON:0002329!2.55e-08!83;UBERON:0003077!2.55e-08!83;UBERON:0003059!2.55e-08!83;UBERON:0007282!2.55e-08!83;UBERON:0009618!2.55e-08!83;UBERON:0007285!2.55e-08!83;UBERON:0002384!4.76e-08!375;UBERON:0002097!1.30e-07!40;UBERON:0000475!7.28e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.39e-16;6!UBERON:0002358;1.39e-16;6!UBERON:0003684;1.39e-16;6!UBERON:0001178;1.39e-16;6!UBERON:0004457;2.53e-14;9!UBERON:0000042;2.53e-14;9!UBERON:0004797;1.22e-10;4!UBERON:0000415;1.22e-10;4!UBERON:0007240;1.22e-10;4!UBERON:0005742;1.22e-10;4!UBERON:0005734;1.22e-10;4!UBERON:0004664;1.22e-10;4!UBERON:0004663;1.22e-10;4!UBERON:0007846;1.80e-08;3!UBERON:0000043;1.80e-08;3!UBERON:0007845;1.80e-08;3!UBERON:0002097;3.34e-08;41!UBERON:0002199;1.61e-07;46!UBERON:0002416;1.61e-07;46!UBERON:0002384;2.27e-07;198!UBERON:0005406;6.40e-07;2!UBERON:0000310;6.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.11e-16,6;UBERON:0002358,1.11e-16,6;UBERON:0003684,1.11e-16,6;UBERON:0001178,1.11e-16,6;UBERON:0002097,2.50e-11,41;UBERON:0002199,5.02e-11,46;UBERON:0002416,5.02e-11,46;UBERON:0004457,1.70e-10,12;UBERON:0000042,1.70e-10,12;UBERON:0000415,1.72e-10,4;UBERON:0007240,1.72e-10,4;UBERON:0005742,1.72e-10,4;UBERON:0005734,1.72e-10,4;UBERON:0004664,1.72e-10,4;UBERON:0004663,1.72e-10,4;UBERON:0002384,5.82e-09,371;UBERON:0007846,1.59e-08,3;UBERON:0000043,1.59e-08,3;UBERON:0007845,1.59e-08,3;UBERON:0003102,6.59e-08,99;UBERON:0005406,6.42e-07,2;UBERON:0000310,6.77e-07,10 | |||
|phase1_expression=7.81217030863394,5.35251309727458,4.93340414335899,10.007329835313,5.36353313312745,13.0850778615055,0,1.26343974685366,0,0,0,0,0,0.74259811776028,0.662794751455832,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,0.434539556882471,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,2.5326102332916,3.31022952033047,4.30254931123221,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0,0.302714855289863,1.15235184896,0.468642863667593,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,1.63323337003915,0.245668634623536,0.929932030581889,4.75201142912821,2.22540236350701,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.877955241761676,2.45190236639216,1.95309476578576,0.226864366320042,1.61450672119976,1.2813443329114,0.635795703478686,3.30100205692843,1.44273540933814,3.34932702059318,2.79175284497385,3.54430297706659,2.63079913935236,1.51460264546469,1.38074847963449,1.93975268182574,2.84007674013291,1.10827308050404,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.36669142910475,1.68053230485111,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.718874566474748,0,0,3.4747513600219,4.9314317412092,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,4.15941723061614,2.14114786556594,4.41566762095017,4.56851518471581,2.10662269809403,2.27407504055985,1.03473071292505,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,5.21026396419431,9.51464234385987,4.2099014164961,3.97231362692673,8.69902323413396,3.53878626515936,11.8734453155993,0.154209693802656,0.710246901252508,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0.34444334449382,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,9.12955805808856,0.6970372701606,0,0,1.73986598415015,0,1.28812398067792,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0,0,0,0,0.48763373908959,1.46228093778771,1.05650146756755,0,0.707027159768564,0,0.551365343546124,0,1.31535265576129,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,0,2.53329162357197,0.658589785919804,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,2.15012491469462,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,3.73247505194169,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.5796644907122,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0.274083849293502,0,0,0,0,0.213452994739353,0,0,0.458146384663663,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,2.79695391420225,2.17199840701485,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,1.51522404220071,0.50313580350515,0,0.915360273587694,0.151230923763239,0.310874401165561,0,0.796483835818512,0,0.155262956876259,0.829412415681711,2.65841714557995,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0.800055529326307,1.03018711554838,1.34699795506368,2.52369796457302,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,1.25362188757041,0.617602894321944,0,0.530067437837643,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.90691047733584,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,3.6974050290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| ||
|short_description=p7@ITGBL1 | |||
}} | }} |
Latest revision as of 08:39, 16 September 2015
Short description: | p7@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | 37bp_to_ENST00000545560_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B3KTP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.10e-29 | 76 |
skin fibroblast | 4.24e-15 | 23 |
fat cell | 1.02e-12 | 15 |
preadipocyte | 1.22e-10 | 12 |
fibroblast of tunica adventitia of artery | 1.72e-10 | 4 |
fibroblast of the aortic adventitia | 1.72e-10 | 4 |
multi fate stem cell | 2.39e-10 | 427 |
somatic stem cell | 5.47e-10 | 433 |
stem cell | 1.59e-09 | 441 |
adipocyte of omentum tissue | 2.36e-09 | 3 |
preadipocyte of the breast | 3.08e-09 | 3 |
omentum preadipocyte | 4.97e-09 | 3 |
mesenchymal cell | 8.75e-09 | 354 |
fibrocyte | 1.59e-08 | 3 |
tendon cell | 1.59e-08 | 3 |
connective tissue cell | 2.33e-08 | 361 |
receptor cell | 2.08e-07 | 6 |
sensory epithelial cell | 2.08e-07 | 6 |
olfactory epithelial cell | 2.08e-07 | 6 |
motile cell | 6.93e-07 | 386 |
adipocyte of breast | 9.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.11e-16 | 6 |
peritoneum | 1.11e-16 | 6 |
abdominal cavity | 1.11e-16 | 6 |
visceral peritoneum | 1.11e-16 | 6 |
skin of body | 2.50e-11 | 41 |
integument | 5.02e-11 | 46 |
integumental system | 5.02e-11 | 46 |
cavity lining | 1.70e-10 | 12 |
serous membrane | 1.70e-10 | 12 |
artery wall | 1.72e-10 | 4 |
tunica adventitia of artery | 1.72e-10 | 4 |
adventitia | 1.72e-10 | 4 |
tunica adventitia of blood vessel | 1.72e-10 | 4 |
aorta tunica adventitia | 1.72e-10 | 4 |
aorta wall | 1.72e-10 | 4 |
connective tissue | 5.82e-09 | 371 |
dense regular connective tissue | 1.59e-08 | 3 |
tendon | 1.59e-08 | 3 |
regular connective tissue | 1.59e-08 | 3 |
surface structure | 6.59e-08 | 99 |
perirenal fat | 6.42e-07 | 2 |
breast | 6.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.94e-08 | 5 |
myotonic disease | 6.94e-08 | 5 |
muscle tissue disease | 6.94e-08 | 5 |
myopathy | 6.94e-08 | 5 |
muscular disease | 6.94e-08 | 5 |
myotonic dystrophy | 6.94e-08 | 5 |