FFCP PHASE1:Hg19::chr19:15940032..15940045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=652995 | |EntrezGene=652995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37126 | |HGNC=37126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=275bp_to_ENST00000397381,NR_015379,uc002nbr.3_5end | |association_with_transcript=275bp_to_ENST00000397381,NR_015379,uc002nbr.3_5end | ||
|cluster_id=chr19:15940032..15940045,+ | |||
|coexpression_cluster_id=C2479 | |coexpression_cluster_id=C2479 | ||
|description=CAGE_peak_5_at_UCA1_5end | |description=CAGE_peak_5_at_UCA1_5end | ||
|id=chr19:15940032..15940045,+ | |id=chr19:15940032..15940045,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.13e-12!254;CL:0002150!4.05e-11!3;CL:0000861!4.05e-11!3;CL:0002541!5.62e-11!3;CL:0002076!8.61e-08!43;CL:1000415!2.52e-07!2;CL:0000223!5.45e-07!59 | |ontology_enrichment_celltype=CL:0000066!4.13e-12!254;CL:0002150!4.05e-11!3;CL:0000861!4.05e-11!3;CL:0002541!5.62e-11!3;CL:0002076!8.61e-08!43;CL:1000415!2.52e-07!2;CL:0000223!5.45e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.72e-10;2!CL:0002541;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.99e-10,2;CL:0002541,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.37e-08;10!UBERON:0007687;3.37e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.65e-25!106;DOID:0050687!1.59e-23!143;DOID:162!5.59e-18!235;DOID:14566!2.28e-17!239;DOID:1749!1.12e-16!14;DOID:1036!3.23e-09!8;DOID:299!1.02e-08!25;DOID:4468!1.37e-07!2;DOID:7!2.68e-07!39 | |ontology_enrichment_disease=DOID:305!1.65e-25!106;DOID:0050687!1.59e-23!143;DOID:162!5.59e-18!235;DOID:14566!2.28e-17!239;DOID:1749!1.12e-16!14;DOID:1036!3.23e-09!8;DOID:299!1.02e-08!25;DOID:4468!1.37e-07!2;DOID:7!2.68e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.43e-10,2;DOID:305,5.71e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.71e-11!7;UBERON:0001173!1.71e-11!7;UBERON:0004912!1.71e-11!7;UBERON:0000476!5.62e-11!3;UBERON:0000920!5.62e-11!3;UBERON:0000344!7.72e-09!12;UBERON:0002394!4.78e-08!4;UBERON:0003928!4.78e-08!4;UBERON:0003124!6.18e-08!7;UBERON:0003343!1.49e-07!4;UBERON:0004785!1.49e-07!4;UBERON:0001255!5.65e-07!2;UBERON:0001556!5.65e-07!2 | |ontology_enrichment_uberon=UBERON:0002294!1.71e-11!7;UBERON:0001173!1.71e-11!7;UBERON:0004912!1.71e-11!7;UBERON:0000476!5.62e-11!3;UBERON:0000920!5.62e-11!3;UBERON:0000344!7.72e-09!12;UBERON:0002394!4.78e-08!4;UBERON:0003928!4.78e-08!4;UBERON:0003124!6.18e-08!7;UBERON:0003343!1.49e-07!4;UBERON:0004785!1.49e-07!4;UBERON:0001255!5.65e-07!2;UBERON:0001556!5.65e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.93e-07;3!UBERON:0000920;1.93e-07;3!UBERON:0002110;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.93e-07,3;UBERON:0002110,2.97e-07,3;UBERON:0006242,2.97e-07,3 | |||
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| ||
|short_description=p5@UCA1 | |short_description=p5@UCA1 | ||
}} | }} |
Latest revision as of 08:36, 16 September 2015
Short description: | p5@UCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UCA1_5end |
Coexpression cluster: | C2479_Wilms_clear_rectal_chorionic_epidermoid_acantholytic_liposarcoma |
Association with transcript: | 275bp_to_ENST00000397381, NR_015379, uc002nbr.3_5end |
EntrezGene: | UCA1 |
HGNC: | 37126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.99e-10 | 2 |
chorionic membrane mesenchymal stem cell | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.93e-07 | 3 |
gallbladder | 2.97e-07 | 3 |
gall bladder primordium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.43e-10 | 2 |
carcinoma | 5.71e-08 | 106 |