FFCP PHASE1:Hg19::chrX:71497059..71497073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6191 | |EntrezGene=6191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10424 | |HGNC=10424 | ||
|TSSclassifier=strong | |||
|UniProt=A6NH36 | |UniProt=A6NH36 | ||
|association_with_transcript=24bp_to_ENST00000373626_5end | |association_with_transcript=24bp_to_ENST00000373626_5end | ||
|cluster_id=chrX:71497059..71497073,- | |||
|description=CAGE_peak_2_at_RPS4X_5end | |description=CAGE_peak_2_at_RPS4X_5end | ||
|id=chrX:71497059..71497073,- | |id=chrX:71497059..71497073,- | ||
|ontology_enrichment_celltype=CL:0000542!6.39e-25!53;CL:0000051!6.39e-25!53;CL:0000838!2.50e-24!52;CL:0000037!2.17e-22!172;CL:0000566!2.17e-22!172;CL:0000738!9.41e-21!140;CL:0000988!1.39e-20!182;CL:0002032!7.43e-20!165;CL:0000837!7.43e-20!165;CL:0002087!7.84e-20!119;CL:0002031!1.02e-19!124;CL:0000084!1.40e-12!25;CL:0000827!1.40e-12!25;CL:0000945!3.61e-11!24;CL:0000826!3.61e-11!24;CL:0000791!3.63e-11!18;CL:0000789!3.63e-11!18;CL:0002420!3.63e-11!18;CL:0002419!3.63e-11!18;CL:0000790!3.63e-11!18;CL:0000236!1.59e-08!14;CL:0000625!4.90e-07!11 | |ontology_enrichment_celltype=CL:0000542!6.39e-25!53;CL:0000051!6.39e-25!53;CL:0000838!2.50e-24!52;CL:0000037!2.17e-22!172;CL:0000566!2.17e-22!172;CL:0000738!9.41e-21!140;CL:0000988!1.39e-20!182;CL:0002032!7.43e-20!165;CL:0000837!7.43e-20!165;CL:0002087!7.84e-20!119;CL:0002031!1.02e-19!124;CL:0000084!1.40e-12!25;CL:0000827!1.40e-12!25;CL:0000945!3.61e-11!24;CL:0000826!3.61e-11!24;CL:0000791!3.63e-11!18;CL:0000789!3.63e-11!18;CL:0002420!3.63e-11!18;CL:0002419!3.63e-11!18;CL:0000790!3.63e-11!18;CL:0000236!1.59e-08!14;CL:0000625!4.90e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.13e-15;53!CL:0000084;8.94e-13;25!CL:0000945;2.05e-11;24!CL:0000791;2.43e-11;18!CL:0000789;2.43e-11;18!CL:0002419;2.43e-11;18!CL:0000236;4.67e-08;13!CL:0002087;1.68e-07;104!CL:0000625;3.94e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.15e-25,53;CL:0000051,6.15e-25,53;CL:0000838,2.41e-24,52;CL:0000037,4.20e-22,168;CL:0000988,1.51e-20,177;CL:0000738,1.63e-20,136;CL:0002032,1.43e-19,161;CL:0000837,1.43e-19,161;CL:0002087,1.70e-19,115;CL:0002031,2.28e-19,120;CL:0000084,1.38e-12,25;CL:0000827,1.38e-12,25;CL:0000945,3.55e-11,24;CL:0000826,3.55e-11,24;CL:0000791,3.57e-11,18;CL:0000789,3.57e-11,18;CL:0002420,3.57e-11,18;CL:0002419,3.57e-11,18;CL:0000790,3.57e-11,18;CL:0000236,1.57e-08,14;CL:0000625,4.85e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;6.13e-15;53!CL:0000790;2.43e-11;18 | |||
|ontology_enrichment_disease=DOID:162!6.65e-21!235;DOID:14566!1.37e-20!239;DOID:0050687!9.36e-15!143;DOID:305!1.04e-11!106;DOID:0050686!1.08e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.53e-21,235;DOID:14566,1.55e-20,239;DOID:0050687,1.12e-14,143;DOID:0050686,1.12e-11,137;DOID:305,1.25e-11,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RPS4X | |short_description=p2@RPS4X | ||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p2@RPS4X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS4X_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000373626_5end |
EntrezGene: | RPS4X |
HGNC: | 10424 |
UniProt: | A6NH36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.15e-25 | 53 |
common lymphoid progenitor | 6.15e-25 | 53 |
lymphoid lineage restricted progenitor cell | 2.41e-24 | 52 |
hematopoietic stem cell | 4.20e-22 | 168 |
hematopoietic cell | 1.51e-20 | 177 |
leukocyte | 1.63e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.43e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-19 | 161 |
nongranular leukocyte | 1.70e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 2.28e-19 | 120 |
T cell | 1.38e-12 | 25 |
pro-T cell | 1.38e-12 | 25 |
lymphocyte of B lineage | 3.55e-11 | 24 |
pro-B cell | 3.55e-11 | 24 |
mature alpha-beta T cell | 3.57e-11 | 18 |
alpha-beta T cell | 3.57e-11 | 18 |
immature T cell | 3.57e-11 | 18 |
mature T cell | 3.57e-11 | 18 |
immature alpha-beta T cell | 3.57e-11 | 18 |
B cell | 1.57e-08 | 14 |
CD8-positive, alpha-beta T cell | 4.85e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.53e-21 | 235 |
disease of cellular proliferation | 1.55e-20 | 239 |
cell type cancer | 1.12e-14 | 143 |
organ system cancer | 1.12e-11 | 137 |
carcinoma | 1.25e-11 | 106 |