FFCP PHASE1:Hg19::chr14:81687197..81687280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2957 | |EntrezGene=2957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4646 | |HGNC=4646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553612_5end | |association_with_transcript=0bp_to_ENST00000553612_5end | ||
|cluster_id=chr14:81687197..81687280,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_GTF2A1_5end | |description=CAGE_peak_1_at_GTF2A1_5end | ||
|id=chr14:81687197..81687280,- | |id=chr14:81687197..81687280,- | ||
|ontology_enrichment_celltype=CL:0000037!9.75e-37!172;CL:0000566!9.75e-37!172;CL:0002032!6.07e-35!165;CL:0000837!6.07e-35!165;CL:0000738!2.62e-34!140;CL:0002031!1.84e-33!124;CL:0000988!1.99e-32!182;CL:0002087!6.64e-30!119;CL:0000766!6.07e-24!76;CL:0000763!9.02e-24!112;CL:0000049!9.02e-24!112;CL:0000557!2.68e-23!71;CL:0000839!7.00e-23!70;CL:0002057!9.20e-21!42;CL:0002009!3.39e-20!65;CL:0000860!1.45e-19!45;CL:0002194!2.57e-19!63;CL:0000576!2.57e-19!63;CL:0000040!2.57e-19!63;CL:0000559!2.57e-19!63;CL:0000542!3.64e-10!53;CL:0000051!3.64e-10!53;CL:0000838!5.73e-10!52;CL:0000236!7.76e-07!14 | |ontology_enrichment_celltype=CL:0000037!9.75e-37!172;CL:0000566!9.75e-37!172;CL:0002032!6.07e-35!165;CL:0000837!6.07e-35!165;CL:0000738!2.62e-34!140;CL:0002031!1.84e-33!124;CL:0000988!1.99e-32!182;CL:0002087!6.64e-30!119;CL:0000766!6.07e-24!76;CL:0000763!9.02e-24!112;CL:0000049!9.02e-24!112;CL:0000557!2.68e-23!71;CL:0000839!7.00e-23!70;CL:0002057!9.20e-21!42;CL:0002009!3.39e-20!65;CL:0000860!1.45e-19!45;CL:0002194!2.57e-19!63;CL:0000576!2.57e-19!63;CL:0000040!2.57e-19!63;CL:0000559!2.57e-19!63;CL:0000542!3.64e-10!53;CL:0000051!3.64e-10!53;CL:0000838!5.73e-10!52;CL:0000236!7.76e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.06e-17;33!CL:0002057;3.06e-17;33!CL:0000473;9.13e-14;39!CL:0000234;9.13e-14;39!CL:0000576;2.45e-13;48!CL:0000766;3.52e-11;69!CL:0002087;2.64e-09;104!CL:0000738;2.48e-08;136!CL:0000763;5.66e-08;100!CL:0000236;4.16e-07;13!CL:0000542;4.30e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.79e-37,168;CL:0002032,2.94e-35,161;CL:0000837,2.94e-35,161;CL:0000738,9.61e-35,136;CL:0002031,5.49e-34,120;CL:0000988,1.77e-33,177;CL:0002087,2.19e-30,115;CL:0000766,1.14e-24,72;CL:0000763,3.72e-24,108;CL:0000049,3.72e-24,108;CL:0000557,4.49e-24,67;CL:0000839,1.18e-23,66;CL:0002009,6.35e-21,61;CL:0000860,9.20e-21,42;CL:0002057,9.20e-21,42;CL:0002194,4.94e-20,59;CL:0000576,4.94e-20,59;CL:0000040,4.94e-20,59;CL:0000559,4.94e-20,59;CL:0000473,8.41e-20,48;CL:0000234,8.41e-20,48;CL:0000542,3.64e-10,53;CL:0000051,3.64e-10,53;CL:0000838,5.73e-10,52;CL:0000236,7.76e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-15;42!CL:0000049;1.30e-07;108!CL:0000051;4.30e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.22e-20!86;UBERON:0002390!1.90e-19!102;UBERON:0003061!1.90e-19!102;UBERON:0002371!2.63e-19!80;UBERON:0002193!4.08e-16!112;UBERON:0004765!3.32e-15!101;UBERON:0001434!3.32e-15!101;UBERON:0002405!4.66e-13!115 | |ontology_enrichment_uberon=UBERON:0001474!2.22e-20!86;UBERON:0002390!1.90e-19!102;UBERON:0003061!1.90e-19!102;UBERON:0002371!2.63e-19!80;UBERON:0002193!4.08e-16!112;UBERON:0004765!3.32e-15!101;UBERON:0001434!3.32e-15!101;UBERON:0002405!4.66e-13!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,7.35e-21,82;UBERON:0002371,8.33e-20,76;UBERON:0002390,8.77e-20,98;UBERON:0003061,8.77e-20,98;UBERON:0004765,7.27e-18,90;UBERON:0002405,5.67e-17,93;UBERON:0002193,2.55e-16,108;UBERON:0001434,4.82e-15,100 | |||
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| ||
|short_description=p1@GTF2A1 | |short_description=p1@GTF2A1 | ||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p1@GTF2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF2A1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000553612_5end |
EntrezGene: | GTF2A1 |
HGNC: | 4646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.79e-37 | 168 |
hematopoietic oligopotent progenitor cell | 2.94e-35 | 161 |
hematopoietic multipotent progenitor cell | 2.94e-35 | 161 |
leukocyte | 9.61e-35 | 136 |
hematopoietic lineage restricted progenitor cell | 5.49e-34 | 120 |
hematopoietic cell | 1.77e-33 | 177 |
nongranular leukocyte | 2.19e-30 | 115 |
myeloid leukocyte | 1.14e-24 | 72 |
myeloid cell | 3.72e-24 | 108 |
common myeloid progenitor | 3.72e-24 | 108 |
granulocyte monocyte progenitor cell | 4.49e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-23 | 66 |
macrophage dendritic cell progenitor | 6.35e-21 | 61 |
classical monocyte | 9.20e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.20e-21 | 42 |
monopoietic cell | 4.94e-20 | 59 |
monocyte | 4.94e-20 | 59 |
monoblast | 4.94e-20 | 59 |
promonocyte | 4.94e-20 | 59 |
defensive cell | 8.41e-20 | 48 |
phagocyte | 8.41e-20 | 48 |
lymphocyte | 3.64e-10 | 53 |
common lymphoid progenitor | 3.64e-10 | 53 |
lymphoid lineage restricted progenitor cell | 5.73e-10 | 52 |
B cell | 7.76e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone element | 7.35e-21 | 82 |
bone marrow | 8.33e-20 | 76 |
hematopoietic system | 8.77e-20 | 98 |
blood island | 8.77e-20 | 98 |
skeletal element | 7.27e-18 | 90 |
immune system | 5.67e-17 | 93 |
hemolymphoid system | 2.55e-16 | 108 |
skeletal system | 4.82e-15 | 100 |