FFCP PHASE1:Hg19::chr5:150591678..150591733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=0bp_to_ENST00000523466_5end | |association_with_transcript=0bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591678..150591733,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_7_at_GM2A_5end | |description=CAGE_peak_7_at_GM2A_5end | ||
|id=chr5:150591678..150591733,+ | |id=chr5:150591678..150591733,+ | ||
|ontology_enrichment_celltype=CL:0000945;3.77e-33;24!CL:0000542;3.42e-26;53!CL:0000236;2.51e-17;13!CL:0002087;3.84e-16;104!CL:0000084;1.18e-13;25!CL:0000860;1.40e-13;33!CL:0002057;1.40e-13;33!CL:0000738;4.94e-13;136!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39!CL:0000094;4.93e-09;8!CL:0000988;3.82e-08;177!CL:0000791;5.06e-08;18!CL:0000789;5.06e-08;18!CL:0002419;5.06e-08;18!CL:0000784;1.03e-07;3 | |ontology_enrichment_celltype=CL:0000037!3.92e-55!172;CL:0000566!3.92e-55!172;CL:0000738!4.85e-52!140;CL:0000988!6.65e-50!182;CL:0002032!7.58e-49!165;CL:0000837!7.58e-49!165;CL:0002087!7.68e-43!119;CL:0000542!2.17e-38!53;CL:0000051!2.17e-38!53;CL:0000838!2.75e-37!52;CL:0002031!4.93e-37!124;CL:0000945!4.02e-22!24;CL:0000826!4.02e-22!24;CL:0000763!8.77e-16!112;CL:0000049!8.77e-16!112;CL:0002057!1.51e-14!42;CL:0000084!1.99e-14!25;CL:0000827!1.99e-14!25;CL:0000236!2.00e-14!14;CL:0000860!6.41e-13!45;CL:0000791!2.78e-11!18;CL:0000789!2.78e-11!18;CL:0002420!2.78e-11!18;CL:0002419!2.78e-11!18;CL:0000790!2.78e-11!18;CL:0000134!4.77e-11!358;CL:0000766!8.85e-11!76;CL:0002320!3.05e-10!365;CL:0002009!1.68e-09!65;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0000219!3.38e-08!390;CL:0000557!6.82e-08!71;CL:0000094!6.77e-07!8;CL:0000839!8.02e-07!70 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;3.77e-33;24!CL:0000542;3.42e-26;53!CL:0000236;2.51e-17;13!CL:0002087;3.84e-16;104!CL:0000084;1.18e-13;25!CL:0000860;1.40e-13;33!CL:0002057;1.40e-13;33!CL:0000738;4.94e-13;136!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39!CL:0000094;4.93e-09;8!CL:0000988;3.82e-08;177!CL:0000791;5.06e-08;18!CL:0000789;5.06e-08;18!CL:0002419;5.06e-08;18!CL:0000784;1.03e-07;3 | ||
|ontology_enrichment_disease=DOID:0060058;4.55e-09;10!DOID:2531;3.91e-07;51!DOID:0060083;3.91e-07;51 | |ontology_enrichment_celltype_v019_2=CL:0000738,1.00e-54,136;CL:0000037,1.19e-53,168;CL:0000988,7.31e-50,177;CL:0002032,2.65e-46,161;CL:0000837,2.65e-46,161;CL:0002087,3.52e-46,115;CL:0000542,1.96e-44,53;CL:0000051,1.96e-44,53;CL:0000838,1.14e-42,52;CL:0002031,1.75e-38,120;CL:0000945,3.65e-33,24;CL:0000826,3.65e-33,24;CL:0000236,4.69e-19,14;CL:0000134,4.07e-16,354;CL:0002320,2.06e-15,361;CL:0000084,1.36e-13,25;CL:0000827,1.36e-13,25;CL:0000219,5.96e-13,386;CL:0000763,1.05e-11,108;CL:0000049,1.05e-11,108;CL:0000860,9.44e-11,42;CL:0002057,9.44e-11,42;CL:0000034,1.24e-10,441;CL:0000766,1.61e-10,72;CL:0000048,5.45e-10,427;CL:0000723,1.38e-09,433;CL:0000094,4.22e-09,8;CL:0000473,7.86e-09,48;CL:0000234,7.86e-09,48;CL:0000791,6.00e-08,18;CL:0000789,6.00e-08,18;CL:0002420,6.00e-08,18;CL:0002419,6.00e-08,18;CL:0000790,6.00e-08,18;CL:0000784,1.02e-07,3;CL:0002009,1.22e-07,61;CL:0002194,3.56e-07,59;CL:0000576,3.56e-07,59;CL:0000040,3.56e-07,59;CL:0000559,3.56e-07,59 | ||
|ontology_enrichment_uberon=UBERON:0004177;3.05e-07;5!UBERON:0005057;3.05e-07;5 | |ontology_enrichment_development_v019=CL:0000051;3.42e-26;53!CL:0002057;2.53e-08;42!CL:0000790;5.06e-08;18 | ||
|ontology_enrichment_disease=DOID:2531!7.70e-12!51;DOID:0060083!7.70e-12!51;DOID:0060058!5.03e-08!10;DOID:1240!1.32e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.55e-09;10!DOID:2531;3.91e-07;51!DOID:0060083;3.91e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.03e-11,51;DOID:0060083,1.03e-11,51;DOID:0060058,4.26e-09,10;DOID:1240,8.21e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.23e-13!112;UBERON:0002390!1.18e-12!102;UBERON:0003061!1.18e-12!102;UBERON:0002384!1.60e-09!375;UBERON:0004177!6.18e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.05e-07;5!UBERON:0005057;3.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.86e-14,371;UBERON:0002390,3.57e-12,98;UBERON:0003061,3.57e-12,98;UBERON:0002193,3.77e-11,108;UBERON:0004177,5.36e-10,7;UBERON:0005057,5.36e-10,7;UBERON:0002370,1.17e-08,4;UBERON:0005058,1.17e-08,4;UBERON:0009113,1.17e-08,4;UBERON:0003295,1.17e-08,4;UBERON:0005562,1.17e-08,4;UBERON:0002405,4.17e-08,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1431057886476,12.9718931330914,11.4130632904835,1.96682138424452,0.383829398097213,1.39334510984468,0,0,0,1.78174561334694,9.52533857665724,0.880801318004542,0,0.401088894940283,0,0,0,0.257575567634187,0.581592955118259,0.377875943688809,1.69808842831471,3.0215774797739,0.822335776043652,3.71647645074124,0.575384784644301,0.256160706529101,0.709446689665756,1.72372840368309,2.5819387343353,2.70852973188684,2.07066573496865,0.818718450173537,7.19115150224271,5.20342617030534,2.24650318953266,3.83602275479425,0,0,0,3.48251086354301,3.40431134814684,13.0792672289071,0.251248665256743,1.0429658368404,0.434377689410233,3.63239701580021,2.94622108790052,8.22802207346299,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,3.51992488922645,5.46138611262132,6.22656477704488,2.98711155796555,5.60554381850417,6.8970292794538,7.27149360063348,4.77026877267682,6.26134266020393,2.93618594685469,0.764546456250458,2.64342657158052,1.68152568894461,1.05353633910031,4.13090517239049,2.75107533924415,1.43921049299656,0.83593247695339,0.651844533267181,0.946895611469467,0,4.01077644786625,0.883817722424512,0,1.08321545506006,0.384273959177026,0.650296737799391,1.80881695064044,0.829050053357545,2.02862160014537,2.07601188426885,1.87278579662799,2.09071047609954,0.679856056185397,1.91610246800961,0.68725489096526,2.27717722817553,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,1.4078527226986,0,1.18388626022008,0,1.20964045934839,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,18.3637780715113,8.57992366170192,15.6012150558417,0,0.860234595106124,0,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0.549605231791222,48.7587544513434,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,142.592581110932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,0.788123040807709,1.50939302401662,0.898401253958239,0,0,0,0,0,12.7331194071021,0,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0.569647187174163,1.66762242820452,1.64544909234478,0.648473311192717,0,2.37937552888281,0,0,0,7.43212700502875,1.15415370381156,44.321368406062,12.7541018183058,0.199579371432817,1.53204296105893,0.846694330895531,0,0,0.228234679033192,3.60363760277953,12.5317238545034,0.677167111206413,0,0,0,0.343505344755765,0,0,0,0,6.68174817348582,0,2.97501246323581,1.6653598399891,0,0,0.293016358543788,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0.19924798825107,1.93398740871803,0,0,4.18488338567636,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.0915975934018623,0,34.7457213865504,0.627921025580099,1.16348177330109,0.225595660617181,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0.596143835108969,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,3.55627994676295,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0.211200673038813,0,0,0,0,0,0,0,0,0,2.9553307469762,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0.992332043623902,0,1.21792598380896,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,8.39947062590706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,3.80272158934072,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.354996002191696,0.681707238073262,0,0,1.5510319283216,2.8666168169323,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,1.31577485171795,6.05904146951625,0.699588091474503,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,2.14257988317366,50.3147607622488,55.6189440090887,0.112131862580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| ||
|short_description=p7@GM2A | |short_description=p7@GM2A | ||
}} | }} |
Latest revision as of 08:17, 16 September 2015
Short description: | p7@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GM2A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 0bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.86e-14 | 371 |
hematopoietic system | 3.57e-12 | 98 |
blood island | 3.57e-12 | 98 |
hemolymphoid system | 3.77e-11 | 108 |
hemopoietic organ | 5.36e-10 | 7 |
immune organ | 5.36e-10 | 7 |
thymus | 1.17e-08 | 4 |
hemolymphoid system gland | 1.17e-08 | 4 |
thymic region | 1.17e-08 | 4 |
pharyngeal gland | 1.17e-08 | 4 |
thymus primordium | 1.17e-08 | 4 |
immune system | 4.17e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.03e-11 | 51 |
immune system cancer | 1.03e-11 | 51 |
lymphoma | 4.26e-09 | 10 |
leukemia | 8.21e-08 | 39 |