FFCP PHASE1:Hg19::chrX:7137506..7137528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |EntrezGene=412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11425 | |HGNC=11425 | ||
|TSSclassifier=strong | |||
|UniProt=P08842 | |UniProt=P08842 | ||
|association_with_transcript=9bp_to_ENST00000217961_5end | |association_with_transcript=9bp_to_ENST00000217961_5end | ||
|cluster_id=chrX:7137506..7137528,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_STS_5end | |description=CAGE_peak_3_at_STS_5end | ||
|id=chrX:7137506..7137528,+ | |id=chrX:7137506..7137528,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.91e-20!7;CL:0000586!7.91e-20!7;CL:0002541!1.36e-17!3;CL:0000819!9.25e-07!1 | |ontology_enrichment_celltype=CL:0000039!7.91e-20!7;CL:0000586!7.91e-20!7;CL:0002541!1.36e-17!3;CL:0000819!9.25e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.38e-42;3!CL:0000039;4.36e-19;7!CL:0000586;4.36e-19;7!CL:0002253;1.86e-08;2!CL:0000349;3.36e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.93e-42,3;CL:0000039,4.36e-19,7;CL:0000586,4.36e-19,7;CL:0002253,1.86e-08,2;CL:0000349,3.29e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.56e-16;1!UBERON:0008425;1.54e-15;1 | |||
|ontology_enrichment_disease=DOID:1799!5.57e-07!1;DOID:10165!5.57e-07!1;DOID:1798!5.57e-07!1;DOID:178!8.75e-07!1;DOID:326!8.75e-07!1;DOID:3978!8.75e-07!1;DOID:3394!8.75e-07!1;DOID:5844!8.75e-07!1;DOID:0060073!9.25e-07!1;DOID:8675!9.25e-07!1;DOID:4960!9.79e-07!1;DOID:0070004!9.79e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.75e-15;1!DOID:10165;2.75e-15;1!DOID:1798;2.75e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.75e-15,1;DOID:10165,2.75e-15,1;DOID:1798,2.75e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.36e-17!3;UBERON:0000920!1.36e-17!3;UBERON:0003124!2.82e-13!7;UBERON:0005631!6.90e-10!14;UBERON:0000158!6.90e-10!14;UBERON:0001046!5.25e-07!19;UBERON:0000996!7.82e-07!1 | |ontology_enrichment_uberon=UBERON:0000476!1.36e-17!3;UBERON:0000920!1.36e-17!3;UBERON:0003124!2.82e-13!7;UBERON:0005631!6.90e-10!14;UBERON:0000158!6.90e-10!14;UBERON:0001046!5.25e-07!19;UBERON:0000996!7.82e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.38e-42;3!UBERON:0000920;3.38e-42;3!UBERON:0005631;3.58e-13;10!UBERON:0000158;3.58e-13;10!UBERON:0000478;1.06e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.93e-42,3;UBERON:0003124,1.86e-32,7;UBERON:0005631,1.95e-16,14;UBERON:0000158,1.95e-16,14;UBERON:0000478,1.03e-09,24 | |||
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|short_description=p3@STS | |short_description=p3@STS | ||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p3@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STS_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 9bp_to_ENST00000217961_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | P08842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.93e-42 | 3 |
germ line cell | 4.36e-19 | 7 |
germ cell | 4.36e-19 | 7 |
epithelial cell of large intestine | 1.86e-08 | 2 |
extraembryonic cell | 3.29e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.93e-42 | 3 |
chorion | 1.86e-32 | 7 |
extraembryonic membrane | 1.95e-16 | 14 |
membranous layer | 1.95e-16 | 14 |
extraembryonic structure | 1.03e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.75e-15 | 1 |
endocrine pancreas cancer | 2.75e-15 | 1 |
pancreatic endocrine carcinoma | 2.75e-15 | 1 |