FFCP PHASE1:Hg19::chr1:116213646..116213662,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81839 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15512 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000478369_5end | |||
|cluster_id=chr1:116213646..116213662,+ | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_4_at_VANGL1_5end | |||
|id=chr1:116213646..116213662,+ | |||
|ontology_enrichment_celltype=CL:1000415!7.70e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.96e-12;1!CL:0000164;1.96e-12;1!CL:0000502;1.96e-12;1!CL:0000172;1.96e-12;1!CL:0000173;1.96e-12;1!CL:0002553;3.44e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.96e-12,1;CL:0000164,1.96e-12,1;CL:0000502,1.96e-12,1;CL:0000172,1.96e-12,1;CL:0000173,1.96e-12,1;CL:0002351,1.96e-12,1;CL:0002553,2.75e-12,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.96e-12;1 | |||
|ontology_enrichment_disease=DOID:0050686!5.98e-18!137;DOID:162!1.98e-15!235;DOID:14566!6.80e-15!239;DOID:3119!1.32e-10!14;DOID:2531!2.38e-07!51;DOID:0060083!2.38e-07!51;DOID:1240!4.72e-07!39;DOID:0050615!8.55e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.42e-15;51!DOID:0060083;3.42e-15;51!DOID:1240;2.05e-13;39!DOID:2355;1.11e-12;1!DOID:9119;1.40e-12;1!DOID:4430;1.96e-12;1!DOID:8692;7.01e-09;31!DOID:74;5.73e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.11e-20,51;DOID:0060083,1.11e-20,51;DOID:1240,1.70e-17,39;DOID:0050686,7.10e-14,137;DOID:2355,1.11e-12,1;DOID:9119,1.40e-12,1;DOID:4430,1.96e-12,1;DOID:162,2.15e-11,235;DOID:14566,4.13e-11,239;DOID:8692,7.07e-09,31;DOID:74,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004807!6.33e-08!28;UBERON:0002294!4.87e-07!7;UBERON:0001173!4.87e-07!7;UBERON:0004912!4.87e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.5243634502453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,0.82509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.539481423798,11.9569704546617,0,2.68107518185313,8.89029047440308,0,3.65036331547496,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0.390776190804081,0,0,0,4.66300755196948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0.254253650292766,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6141234948062,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,1.79828648623917,0,0,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,2.02265412931063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06004653103894,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.235265819698172,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,1.0085253435176,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,1.50962843566674,0.0771741581079447,0,0.940634592723046,0,2.59244201811789,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.645889098360061,0.496597714366863,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@VANGL1 | |||
}} |
Latest revision as of 08:03, 16 September 2015
Short description: | p4@VANGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VANGL1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -3bp_to_ENST00000478369_5end |
EntrezGene: | VANGL1 |
HGNC: | 15512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.96e-12 | 1 |
enteroendocrine cell | 1.96e-12 | 1 |
type D enteroendocrine cell | 1.96e-12 | 1 |
somatostatin secreting cell | 1.96e-12 | 1 |
pancreatic D cell | 1.96e-12 | 1 |
progenitor cell of endocrine pancreas | 1.96e-12 | 1 |
lung fibroblast | 2.75e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.11e-20 | 51 |
immune system cancer | 1.11e-20 | 51 |
leukemia | 1.70e-17 | 39 |
organ system cancer | 7.10e-14 | 137 |
anemia | 1.11e-12 | 1 |
acute myeloid leukemia | 1.40e-12 | 1 |
somatostatinoma | 1.96e-12 | 1 |
cancer | 2.15e-11 | 235 |
disease of cellular proliferation | 4.13e-11 | 239 |
myeloid leukemia | 7.07e-09 | 31 |
hematopoietic system disease | 5.73e-07 | 2 |