FFCP PHASE1:Hg19::chr19:15590306..15590318,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114770 | |EntrezGene=114770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30013 | |HGNC=30013 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PD5 | |UniProt=Q96PD5 | ||
|association_with_transcript=0bp_to_NM_052890,uc002nbf.3,uc002nbg.3_5end | |association_with_transcript=0bp_to_NM_052890,uc002nbf.3,uc002nbg.3_5end | ||
|cluster_id=chr19:15590306..15590318,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_PGLYRP2_5end | |description=CAGE_peak_2_at_PGLYRP2_5end | ||
|id=chr19:15590306..15590318,- | |id=chr19:15590306..15590318,- | ||
|ontology_enrichment_celltype=CL:0000181!8.31e-21!12;CL:0000417!8.31e-21!12;CL:0000668!8.31e-21!12;CL:0000414!8.31e-21!12;CL:0000412!8.31e-21!12;CL:0000182!8.31e-21!12 | |ontology_enrichment_celltype=CL:0000181!8.31e-21!12;CL:0000417!8.31e-21!12;CL:0000668!8.31e-21!12;CL:0000414!8.31e-21!12;CL:0000412!8.31e-21!12;CL:0000182!8.31e-21!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.06e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.28e-09;10!UBERON:0005564;8.28e-09;10!UBERON:0004161;3.37e-08;11!UBERON:0009497;4.52e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.73e-25!19;UBERON:0006925!2.73e-25!19;UBERON:0008836!2.73e-25!19;UBERON:0005057!9.50e-24!26;UBERON:0008835!9.25e-22!22;UBERON:0003894!9.25e-22!22;UBERON:0009854!8.69e-21!23;UBERON:0007499!4.48e-19!25;UBERON:0009497!4.48e-19!25;UBERON:0000015!4.48e-19!25;UBERON:0002423!4.48e-19!25;UBERON:0006235!4.48e-19!25;UBERON:0004161!4.48e-19!25;UBERON:0009856!2.57e-18!26;UBERON:0002368!2.01e-17!35;UBERON:0002365!2.94e-15!31;UBERON:0002330!2.94e-15!31;UBERON:0005172!1.44e-13!55;UBERON:0005173!1.44e-13!55;UBERON:0000949!2.40e-13!45;UBERON:0002417!4.08e-12!61;UBERON:0000916!4.08e-12!61;UBERON:0001301!2.96e-11!1;UBERON:0006834!4.44e-11!1;UBERON:0003929!5.78e-11!54;UBERON:0002530!5.93e-10!59;UBERON:0003135!8.89e-09!11;UBERON:0000466!5.51e-08!126;UBERON:0005911!6.90e-07!82 | |ontology_enrichment_uberon=UBERON:0002107!2.73e-25!19;UBERON:0006925!2.73e-25!19;UBERON:0008836!2.73e-25!19;UBERON:0005057!9.50e-24!26;UBERON:0008835!9.25e-22!22;UBERON:0003894!9.25e-22!22;UBERON:0009854!8.69e-21!23;UBERON:0007499!4.48e-19!25;UBERON:0009497!4.48e-19!25;UBERON:0000015!4.48e-19!25;UBERON:0002423!4.48e-19!25;UBERON:0006235!4.48e-19!25;UBERON:0004161!4.48e-19!25;UBERON:0009856!2.57e-18!26;UBERON:0002368!2.01e-17!35;UBERON:0002365!2.94e-15!31;UBERON:0002330!2.94e-15!31;UBERON:0005172!1.44e-13!55;UBERON:0005173!1.44e-13!55;UBERON:0000949!2.40e-13!45;UBERON:0002417!4.08e-12!61;UBERON:0000916!4.08e-12!61;UBERON:0001301!2.96e-11!1;UBERON:0006834!4.44e-11!1;UBERON:0003929!5.78e-11!54;UBERON:0002530!5.93e-10!59;UBERON:0003135!8.89e-09!11;UBERON:0000466!5.51e-08!126;UBERON:0005911!6.90e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-26;19!UBERON:0006925;2.32e-26;19!UBERON:0002423;4.25e-20;25!UBERON:0002365;3.25e-16;31!UBERON:0002330;3.25e-16;31!UBERON:0002368;4.81e-14;33!UBERON:0000473;8.90e-11;8!UBERON:0000949;3.01e-10;43!UBERON:0003135;4.34e-08;11!UBERON:0005172;1.87e-07;52!UBERON:0005173;1.87e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-26,19;UBERON:0006925,2.32e-26,19;UBERON:0008836,2.32e-26,19;UBERON:0008835,8.36e-23,22;UBERON:0003894,8.36e-23,22;UBERON:0009854,7.98e-22,23;UBERON:0007499,4.25e-20,25;UBERON:0009497,4.25e-20,25;UBERON:0000015,4.25e-20,25;UBERON:0002423,4.25e-20,25;UBERON:0006235,4.25e-20,25;UBERON:0004161,4.25e-20,25;UBERON:0009856,2.47e-19,26;UBERON:0002365,2.99e-16,31;UBERON:0002330,2.99e-16,31;UBERON:0002368,2.05e-14,35;UBERON:0000949,3.05e-11,45;UBERON:0000473,8.90e-11,8;UBERON:0003929,2.19e-09,54;UBERON:0005172,2.19e-09,54;UBERON:0005173,2.19e-09,54;UBERON:0002530,1.35e-08,59;UBERON:0002417,1.87e-08,60;UBERON:0000916,1.87e-08,60;UBERON:0003135,4.34e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.474229250338,65.8494235174009,38.4013439342913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9867013113614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5087893474453,29.1515155606887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19897633073274,9.9146728157786,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.474229250338,65.8494235174009,38.4013439342913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9867013113614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5087893474453,29.1515155606887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19897633073274,9.9146728157786,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@PGLYRP2 | |short_description=p2@PGLYRP2 | ||
}} | }} |
Latest revision as of 07:53, 16 September 2015
Short description: | p2@PGLYRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGLYRP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_052890, uc002nbf.3, uc002nbg.3_5end |
EntrezGene: | PGLYRP2 |
HGNC: | 30013 |
UniProt: | Q96PD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-26 | 19 |
digestive gland | 2.32e-26 | 19 |
liver bud | 2.32e-26 | 19 |
hepatic diverticulum | 8.36e-23 | 22 |
liver primordium | 8.36e-23 | 22 |
digestive tract diverticulum | 7.98e-22 | 23 |
epithelial sac | 4.25e-20 | 25 |
epithelium of foregut-midgut junction | 4.25e-20 | 25 |
anatomical boundary | 4.25e-20 | 25 |
hepatobiliary system | 4.25e-20 | 25 |
foregut-midgut junction | 4.25e-20 | 25 |
septum transversum | 4.25e-20 | 25 |
sac | 2.47e-19 | 26 |
exocrine gland | 2.99e-16 | 31 |
exocrine system | 2.99e-16 | 31 |
endocrine gland | 2.05e-14 | 35 |
endocrine system | 3.05e-11 | 45 |
testis | 8.90e-11 | 8 |
gut epithelium | 2.19e-09 | 54 |
abdomen element | 2.19e-09 | 54 |
abdominal segment element | 2.19e-09 | 54 |
gland | 1.35e-08 | 59 |
abdominal segment of trunk | 1.87e-08 | 60 |
abdomen | 1.87e-08 | 60 |
male reproductive organ | 4.34e-08 | 11 |