FFCP PHASE1:Hg19::chrX:70838306..70838369,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2833 | |EntrezGene=2833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4540 | |HGNC=4540 | ||
|TSSclassifier=strong | |||
|UniProt=C9JB00,P49682 | |UniProt=C9JB00,P49682 | ||
|association_with_transcript=0bp_to_ENST00000373687,ENST00000373691,ENST00000373693,NM_001142797,NM_001504,uc004eaf.2,uc011mpx.1_5end | |association_with_transcript=0bp_to_ENST00000373687,ENST00000373691,ENST00000373693,NM_001142797,NM_001504,uc004eaf.2,uc011mpx.1_5end | ||
|cluster_id=chrX:70838306..70838369,- | |||
|coexpression_cluster_id=C974 | |coexpression_cluster_id=C974 | ||
|description=CAGE_peak_1_at_CXCR3_5end | |description=CAGE_peak_1_at_CXCR3_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.53e-63!172;CL:0000566!1.53e-63!172;CL:0000988!3.22e-60!182;CL:0000738!4.23e-58!140;CL:0002032!7.67e-58!165;CL:0000837!7.67e-58!165;CL:0002087!1.39e-47!119;CL:0002031!1.90e-46!124;CL:0000542!3.24e-34!53;CL:0000051!3.24e-34!53;CL:0000838!6.03e-34!52;CL:0000763!3.55e-24!112;CL:0000049!3.55e-24!112;CL:0000084!1.45e-21!25;CL:0000827!1.45e-21!25;CL:0000766!1.34e-17!76;CL:0000791!3.28e-17!18;CL:0000789!3.28e-17!18;CL:0002420!3.28e-17!18;CL:0002419!3.28e-17!18;CL:0000790!3.28e-17!18;CL:0000557!2.02e-15!71;CL:0002057!2.03e-14!42;CL:0000839!2.92e-14!70;CL:0002009!4.31e-14!65;CL:0000860!2.22e-13!45;CL:0002194!2.23e-13!63;CL:0000576!2.23e-13!63;CL:0000040!2.23e-13!63;CL:0000559!2.23e-13!63;CL:0000625!7.12e-12!11;CL:0000945!1.63e-11!24;CL:0000826!1.63e-11!24;CL:0000134!2.31e-11!358;CL:0002320!2.07e-10!365;CL:0000236!6.52e-09!14;CL:0000219!3.00e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.53e-63!172;CL:0000566!1.53e-63!172;CL:0000988!3.22e-60!182;CL:0000738!4.23e-58!140;CL:0002032!7.67e-58!165;CL:0000837!7.67e-58!165;CL:0002087!1.39e-47!119;CL:0002031!1.90e-46!124;CL:0000542!3.24e-34!53;CL:0000051!3.24e-34!53;CL:0000838!6.03e-34!52;CL:0000763!3.55e-24!112;CL:0000049!3.55e-24!112;CL:0000084!1.45e-21!25;CL:0000827!1.45e-21!25;CL:0000766!1.34e-17!76;CL:0000791!3.28e-17!18;CL:0000789!3.28e-17!18;CL:0002420!3.28e-17!18;CL:0002419!3.28e-17!18;CL:0000790!3.28e-17!18;CL:0000557!2.02e-15!71;CL:0002057!2.03e-14!42;CL:0000839!2.92e-14!70;CL:0002009!4.31e-14!65;CL:0000860!2.22e-13!45;CL:0002194!2.23e-13!63;CL:0000576!2.23e-13!63;CL:0000040!2.23e-13!63;CL:0000559!2.23e-13!63;CL:0000625!7.12e-12!11;CL:0000945!1.63e-11!24;CL:0000826!1.63e-11!24;CL:0000134!2.31e-11!358;CL:0002320!2.07e-10!365;CL:0000236!6.52e-09!14;CL:0000219!3.00e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.91e-28;25!CL:0000542;2.34e-22;53!CL:0000791;3.02e-22;18!CL:0000789;3.02e-22;18!CL:0002419;3.02e-22;18!CL:0002087;1.11e-18;104!CL:0000860;8.53e-16;33!CL:0002057;8.53e-16;33!CL:0000625;3.76e-15;11!CL:0000738;1.18e-13;136!CL:0000576;3.55e-13;48!CL:0000945;3.72e-12;24!CL:0000473;2.26e-10;39!CL:0000234;2.26e-10;39!CL:0000988;5.96e-10;177!CL:0000236;2.31e-09;13!CL:0000766;1.70e-08;69!CL:0000624;1.53e-07;6!CL:0000763;2.52e-07;100 | |ontology_enrichment_celltype_v019=CL:0000084;5.91e-28;25!CL:0000542;2.34e-22;53!CL:0000791;3.02e-22;18!CL:0000789;3.02e-22;18!CL:0002419;3.02e-22;18!CL:0002087;1.11e-18;104!CL:0000860;8.53e-16;33!CL:0002057;8.53e-16;33!CL:0000625;3.76e-15;11!CL:0000738;1.18e-13;136!CL:0000576;3.55e-13;48!CL:0000945;3.72e-12;24!CL:0000473;2.26e-10;39!CL:0000234;2.26e-10;39!CL:0000988;5.96e-10;177!CL:0000236;2.31e-09;13!CL:0000766;1.70e-08;69!CL:0000624;1.53e-07;6!CL:0000763;2.52e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.72e-64,168;CL:0000738,2.47e-64,136;CL:0000988,2.52e-59,177;CL:0002032,1.29e-58,161;CL:0000837,1.29e-58,161;CL:0002087,2.55e-55,115;CL:0002031,7.27e-51,120;CL:0000838,3.85e-41,52;CL:0000542,4.97e-40,53;CL:0000051,4.97e-40,53;CL:0000084,5.99e-28,25;CL:0000827,5.99e-28,25;CL:0000791,3.40e-22,18;CL:0000789,3.40e-22,18;CL:0002420,3.40e-22,18;CL:0002419,3.40e-22,18;CL:0000790,3.40e-22,18;CL:0000763,2.13e-21,108;CL:0000049,2.13e-21,108;CL:0000766,5.87e-18,72;CL:0000860,1.31e-15,42;CL:0002057,1.31e-15,42;CL:0000625,3.75e-15,11;CL:0002009,8.18e-15,61;CL:0002194,9.37e-15,59;CL:0000576,9.37e-15,59;CL:0000040,9.37e-15,59;CL:0000559,9.37e-15,59;CL:0000557,2.30e-14,67;CL:0000839,6.78e-14,66;CL:0000134,3.47e-13,354;CL:0000473,1.62e-12,48;CL:0000234,1.62e-12,48;CL:0002320,2.38e-12,361;CL:0000945,3.33e-12,24;CL:0000826,3.33e-12,24;CL:0000236,2.87e-10,14;CL:0000219,1.71e-09,386;CL:0000624,1.72e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.34e-22;53!CL:0000790;3.02e-22;18!CL:0002057;4.44e-12;42 | |ontology_enrichment_development_v019=CL:0000051;2.34e-22;53!CL:0000790;3.02e-22;18!CL:0002057;4.44e-12;42 | ||
|ontology_enrichment_disease=DOID:2531!1.85e-12!51;DOID:0060083!1.85e-12!51;DOID:1240!4.28e-12!39;DOID:8692!3.84e-08!31 | |ontology_enrichment_disease=DOID:2531!1.85e-12!51;DOID:0060083!1.85e-12!51;DOID:1240!4.28e-12!39;DOID:8692!3.84e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.97e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;5.97e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.39e-09,51;DOID:0060083,3.39e-09,51;DOID:1240,8.47e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.04e-25!102;UBERON:0003061!6.04e-25!102;UBERON:0002193!1.65e-22!112;UBERON:0002371!1.88e-12!80;UBERON:0000178!7.41e-12!15;UBERON:0000179!7.41e-12!15;UBERON:0000463!7.41e-12!15;UBERON:0001474!1.04e-11!86;UBERON:0002405!5.38e-11!115;UBERON:0007023!3.74e-10!115;UBERON:0002384!1.87e-09!375;UBERON:0004765!9.61e-08!101;UBERON:0001434!9.61e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!6.04e-25!102;UBERON:0003061!6.04e-25!102;UBERON:0002193!1.65e-22!112;UBERON:0002371!1.88e-12!80;UBERON:0000178!7.41e-12!15;UBERON:0000179!7.41e-12!15;UBERON:0000463!7.41e-12!15;UBERON:0001474!1.04e-11!86;UBERON:0002405!5.38e-11!115;UBERON:0007023!3.74e-10!115;UBERON:0002384!1.87e-09!375;UBERON:0004765!9.61e-08!101;UBERON:0001434!9.61e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.01e-11;15!UBERON:0000179;8.01e-11;15!UBERON:0000463;8.01e-11;15!UBERON:0002390;8.93e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.01e-11;15!UBERON:0000179;8.01e-11;15!UBERON:0000463;8.01e-11;15!UBERON:0002390;8.93e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.46e-24,98;UBERON:0003061,7.46e-24,98;UBERON:0002193,3.57e-22,108;UBERON:0002405,1.77e-14,93;UBERON:0002371,2.40e-11,76;UBERON:0002384,3.15e-11,371;UBERON:0000178,8.53e-11,15;UBERON:0000179,8.53e-11,15;UBERON:0000463,8.53e-11,15;UBERON:0001474,1.79e-10,82;UBERON:0004765,1.31e-08,90;UBERON:0004177,4.11e-08,7;UBERON:0005057,4.11e-08,7;UBERON:0001434,9.01e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4324126635145,37.2736676102754,46.0458070685024,14.5544782434094,41.0697455964018,16.5653251948201,0,0,0,0.0774672005803016,0,0.293600439334847,7.75593571944628,8.22232234627581,4.34021741431704,1.11957737119962,6.47787332037959,2.57575567634187,2.90796477559129,0.755751887377619,1.21292030593908,3.48643555358527,6.57868620834921,7.43295290148249,5.17846306179871,5.12321413058201,1.41889337933151,7.23965929546899,5.80936215225443,8.12558919566051,3.01187743268168,5.18521685109907,2.69668181334102,6.12167784741805,9.30694178520671,7.67204550958849,3.95821560224059,1.79517291859469,1.27867425159808,4.35313857942876,7.37600792098482,0.622822248995575,3.51748131359441,4.17186334736161,2.38907729175628,3.02699751316684,9.20694089968912,4.43047342417238,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,14.0796995569058,9.83049500271837,6.22656477704488,7.25441378363062,4.80475184443215,12.0698012390441,10.5767179645578,9.54053754535364,7.96898156753228,10.5702694086769,6.88091810625412,0,16.8152568894461,2.89722493252585,9.04864942523632,25.9387103414449,40.5034953029033,85.9338586308085,2.28145586643513,4.73447805734733,5.84480185223734,65.3979381915969,15.3195071886915,18.8303810396078,42.2454027473424,73.2682348830862,80.5067361395646,60.0198351803418,53.0592034148829,53.0339646895146,1.18629250529648,2.40786745280742,3.1360657141493,89.2877620456822,29.8911985009499,51.2004893769119,70.0864546894023,43.9620271767253,63.806178477929,58.9280267557992,37.794354888521,43.8994076259655,54.9695196830322,58.2472040028281,41.0563998460523,75.4009219660499,123.022490060413,49.0954729162689,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.94702919869853,0,0,0.649094787309367,0.348259474598534,0,231.097414951876,207.634152613186,152.297575545122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,6.40462209264727,2.55340458638356,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.3944833173786,41.3764596424047,43.1255149719035,19.5081415145218,0,0,0,0,0,0,5.9832291840805,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5377148473947,9.49142483601914,32.0182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,20.8053519785189,19.1159301785594,23.3555346741407,20.0114691384543,25.0930986582578,27.2358790700941,29.1616976108582,36.4837581095364,0,0,0,0.557409525377156,0.144269212976445,5.97591484126679,9.2467238182717,11.1764448002377,25.8532249678695,2.11673582723883,0.649243880549111,0.280797178113459,10.4987952355268,0.313359791546046,0,3.04725200042886,4.01470187759249,1.61439765752838,0.425846237690326,2.74804275804612,5.53033375755224,6.26293102098765,4.33807768450962,2.14926904942244,11.9714654774954,0,0,5.99529542396076,0,0,0.439524537815682,0,13.7075362661298,0,0,0.296964680832639,0,0,0.140669416410513,0,2.63686198762815,0,0.597743964753209,8.01223355040328,0,0,2.33861130376032,0,0,0,2.04628948090749,1.38100767891707,7.18449277040819,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,1.53900517007594,0,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,3.06579894587209,11.3025784604418,2.32696354660219,0,0,0,0.189753732724185,0.635746315921515,0,0,0,0,0.995261931078505,2.12298154808014,1.22206028986725,0.593042257361244,0.494255755786011,0.417687798021821,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,2.84339608328196,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.39781334593624,0.171986032471617,0.0967563312890851,0,0,1.06687918137261,0,0,0,0,0,0,2.16428814679141,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0.157566364614447,0.0824158583811665,0,0,4.74170659568393,0,0,0,0,0,1.799791132412,0.77380195455795,0,0,1.49730843868477,0.157363764404994,0.105600336519406,0,0,2.85878130549347,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,2.34932307648928,0.157204305099666,4.14239055347196,14.3888146325466,7.70685364401983,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,1.99297260470045,1.6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| ||
|short_description=p1@CXCR3 | |short_description=p1@CXCR3 | ||
}} | }} |
Latest revision as of 07:41, 16 September 2015
Short description: | p1@CXCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCR3_5end |
Coexpression cluster: | C974_Dendritic_CD8_CD4_Natural_NK_B_Basophils |
Association with transcript: | 0bp_to_ENST00000373687, ENST00000373691, ENST00000373693, NM_001142797, NM_001504, uc004eaf.2, uc011mpx.1_5end |
EntrezGene: | CXCR3 |
HGNC: | 4540 |
UniProt: | C9JB00P49682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.46e-24 | 98 |
blood island | 7.46e-24 | 98 |
hemolymphoid system | 3.57e-22 | 108 |
immune system | 1.77e-14 | 93 |
bone marrow | 2.40e-11 | 76 |
connective tissue | 3.15e-11 | 371 |
blood | 8.53e-11 | 15 |
haemolymphatic fluid | 8.53e-11 | 15 |
organism substance | 8.53e-11 | 15 |
bone element | 1.79e-10 | 82 |
skeletal element | 1.31e-08 | 90 |
hemopoietic organ | 4.11e-08 | 7 |
immune organ | 4.11e-08 | 7 |
skeletal system | 9.01e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.39e-09 | 51 |
immune system cancer | 3.39e-09 | 51 |
leukemia | 8.47e-09 | 39 |