FFCP PHASE1:Hg19::chr16:30394126..30394142,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1731 | |EntrezGene=1731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2879 | |HGNC=2879 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYJ6 | |UniProt=Q8WYJ6 | ||
|association_with_transcript=28bp_to_ENST00000321367,NM_052838,uc002dxy.2,uc010veq.1_5end | |||
|cluster_id=chr16:30394126..30394142,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_SEPT1_5end | |||
|id=chr16:30394126..30394142,- | |||
|ontology_enrichment_celltype=CL:0000542!4.44e-46!53;CL:0000051!4.44e-46!53;CL:0000838!5.87e-45!52;CL:0000084!1.39e-35!25;CL:0000827!1.39e-35!25;CL:0000791!1.56e-28!18;CL:0000789!1.56e-28!18;CL:0002420!1.56e-28!18;CL:0002419!1.56e-28!18;CL:0000790!1.56e-28!18;CL:0000037!3.60e-26!172;CL:0000566!3.60e-26!172;CL:0000738!3.97e-26!140;CL:0002087!6.51e-25!119;CL:0000988!1.26e-23!182;CL:0002031!9.81e-21!124;CL:0002032!1.28e-20!165;CL:0000837!1.28e-20!165;CL:0000625!3.93e-18!11;CL:0000624!7.73e-11!6;CL:0000945!4.12e-10!24;CL:0000826!4.12e-10!24;CL:0000236!5.34e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-48;25!CL:0000791;1.47e-40;18!CL:0000789;1.47e-40;18!CL:0002419;1.47e-40;18!CL:0000625;2.87e-28;11!CL:0000542;9.31e-22;53!CL:0000624;1.54e-16;6!CL:0000898;4.22e-09;3!CL:0000226;2.12e-08;3!CL:0000842;2.12e-08;3!CL:0000623;2.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.59e-48,25;CL:0000827,2.59e-48,25;CL:0000791,1.33e-40,18;CL:0000789,1.33e-40,18;CL:0002420,1.33e-40,18;CL:0002419,1.33e-40,18;CL:0000790,1.33e-40,18;CL:0000838,2.13e-38,52;CL:0000542,1.64e-37,53;CL:0000051,1.64e-37,53;CL:0000625,2.51e-28,11;CL:0002087,2.13e-17,115;CL:0000738,1.14e-16,136;CL:0000624,1.58e-16,6;CL:0002031,6.97e-13,120;CL:0000037,1.21e-12,168;CL:0000988,1.57e-11,177;CL:0002032,3.64e-09,161;CL:0000837,3.64e-09,161;CL:0000898,4.71e-09,3;CL:0000226,1.84e-08,3;CL:0000842,1.84e-08,3;CL:0000623,3.26e-08,3;CL:0000825,3.26e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.47e-40;18!CL:0000051;9.31e-22;53 | |||
|ontology_enrichment_disease=DOID:2531!6.99e-07!51;DOID:0060083!6.99e-07!51;DOID:0060058!9.47e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.71e-14!15;UBERON:0000179!2.71e-14!15;UBERON:0000463!2.71e-14!15;UBERON:0004177!1.30e-08!7;UBERON:0002370!7.47e-08!4;UBERON:0005058!7.47e-08!4;UBERON:0009113!7.47e-08!4;UBERON:0003295!7.47e-08!4;UBERON:0005562!7.47e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.92e-23;15!UBERON:0000179;7.92e-23;15!UBERON:0000463;7.92e-23;15!UBERON:0002390;6.42e-14;32!UBERON:0002193;1.07e-09;42!UBERON:0002370;3.65e-07;2!UBERON:0005058;3.65e-07;2!UBERON:0009113;3.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.23e-23,15;UBERON:0000179,7.23e-23,15;UBERON:0000463,7.23e-23,15;UBERON:0002370,1.84e-07,4;UBERON:0005058,1.84e-07,4;UBERON:0009113,1.84e-07,4;UBERON:0003295,1.84e-07,4;UBERON:0005562,1.84e-07,4;UBERON:0004177,9.73e-07,7;UBERON:0005057,9.73e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.903106483949403,0.629686250509434,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,2.47895041856965,0,0.293600439334847,0.553995408531877,0.802177789880567,1.95309783644267,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,1.28019066769952,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0,0,0.560508562981536,0.263384084775077,10.2289080459193,5.89516144123747,11.719285442972,8.86088425570594,7.17028986593899,7.57516489175573,7.79306913631645,17.4914417309723,5.00830042707223,7.97522020501036,7.58250818542044,8.71020974134591,9.62439171943099,15.7860388419529,20.4499013161528,23.4740499445393,18.9806800847437,13.1095005763959,17.7710390468461,10.0845315000834,15.7120402376788,11.3397057009268,12.3979649089556,10.8312240870193,10.4173352617027,12.3558765778289,10.8414085735996,12.2867146708242,4.99722906209383,12.3124171062889,4.10563998460523,3.42731463482045,2.67440195783507,5.35850294366356,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4609538596109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,3.15249216323084,2.37190332345469,5.00537841491019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.8828556147351,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,8.11916174771471,3.82318603571188,5.12682468456746,6.4322579373603,5.34770955012053,5.83625980073446,8.10047155857172,4.75875105776562,0,0,0,0.371606350251437,0.28853842595289,23.6190919916735,15.4643484546958,0,0.383010740264733,0,0,4.21195767170188,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6141234948062,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,2.48083010905975,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81155412280008,0.385870790539723,0.874238242015829,0,0,0,0,0,0,0,0.657887425858975,1.54698931136585,0,0,0,0,0,1.37618785021362,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,26.2876863032545,16.5739487169941,0,0,0,0.217716747896961,0,2.55937801455433,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,7.04458277568592,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.903106483949403,0.629686250509434,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,2.47895041856965,0,0.293600439334847,0.553995408531877,0.802177789880567,1.95309783644267,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,1.28019066769952,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0,0,0.560508562981536,0.263384084775077,10.2289080459193,5.89516144123747,11.719285442972,8.86088425570594,7.17028986593899,7.57516489175573,7.79306913631645,17.4914417309723,5.00830042707223,7.97522020501036,7.58250818542044,8.71020974134591,9.62439171943099,15.7860388419529,20.4499013161528,23.4740499445393,18.9806800847437,13.1095005763959,17.7710390468461,10.0845315000834,15.7120402376788,11.3397057009268,12.3979649089556,10.8312240870193,10.4173352617027,12.3558765778289,10.8414085735996,12.2867146708242,4.99722906209383,12.3124171062889,4.10563998460523,3.42731463482045,2.67440195783507,5.35850294366356,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4609538596109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,3.15249216323084,2.37190332345469,5.00537841491019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.8828556147351,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,8.11916174771471,3.82318603571188,5.12682468456746,6.4322579373603,5.34770955012053,5.83625980073446,8.10047155857172,4.75875105776562,0,0,0,0.371606350251437,0.28853842595289,23.6190919916735,15.4643484546958,0,0.383010740264733,0,0,4.21195767170188,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6141234948062,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,2.48083010905975,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81155412280008,0.385870790539723,0.874238242015829,0,0,0,0,0,0,0,0.657887425858975,1.54698931136585,0,0,0,0,0,1.37618785021362,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,26.2876863032545,16.5739487169941,0,0,0,0.217716747896961,0,2.55937801455433,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,7.04458277568592,0 | ||
|short_description=p6@SEPT1 | |||
}} | }} |
Latest revision as of 07:38, 16 September 2015
Short description: | p6@SEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SEPT1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 28bp_to_ENST00000321367, NM_052838, uc002dxy.2, uc010veq.1_5end |
EntrezGene: | SEPT1 |
HGNC: | 2879 |
UniProt: | Q8WYJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.59e-48 | 25 |
pro-T cell | 2.59e-48 | 25 |
mature alpha-beta T cell | 1.33e-40 | 18 |
alpha-beta T cell | 1.33e-40 | 18 |
immature T cell | 1.33e-40 | 18 |
mature T cell | 1.33e-40 | 18 |
immature alpha-beta T cell | 1.33e-40 | 18 |
lymphoid lineage restricted progenitor cell | 2.13e-38 | 52 |
lymphocyte | 1.64e-37 | 53 |
common lymphoid progenitor | 1.64e-37 | 53 |
CD8-positive, alpha-beta T cell | 2.51e-28 | 11 |
nongranular leukocyte | 2.13e-17 | 115 |
leukocyte | 1.14e-16 | 136 |
CD4-positive, alpha-beta T cell | 1.58e-16 | 6 |
hematopoietic lineage restricted progenitor cell | 6.97e-13 | 120 |
hematopoietic stem cell | 1.21e-12 | 168 |
hematopoietic cell | 1.57e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.64e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.64e-09 | 161 |
naive T cell | 4.71e-09 | 3 |
single nucleate cell | 1.84e-08 | 3 |
mononuclear cell | 1.84e-08 | 3 |
natural killer cell | 3.26e-08 | 3 |
pro-NK cell | 3.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.23e-23 | 15 |
haemolymphatic fluid | 7.23e-23 | 15 |
organism substance | 7.23e-23 | 15 |
thymus | 1.84e-07 | 4 |
hemolymphoid system gland | 1.84e-07 | 4 |
thymic region | 1.84e-07 | 4 |
pharyngeal gland | 1.84e-07 | 4 |
thymus primordium | 1.84e-07 | 4 |
hemopoietic organ | 9.73e-07 | 7 |
immune organ | 9.73e-07 | 7 |