FFCP PHASE1:Hg19::chr12:110434043..110434066,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:110434043..110434066,-
|short_description=p3@GIT2
|description=CAGE_peak_3_at_GIT2_5end
|association_with_transcript=-13bp_to_ENST00000551494_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9815 | |EntrezGene=9815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4273 | |HGNC=4273 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVT4 | |UniProt=F8VVT4 | ||
|association_with_transcript=-13bp_to_ENST00000551494_5end | |||
|cluster_id=chr12:110434043..110434066,- | |||
|coexpression_cluster_id=C3220 | |||
|description=CAGE_peak_3_at_GIT2_5end | |||
|id=chr12:110434043..110434066,- | |||
|ontology_enrichment_celltype=CL:0000037!6.00e-45!172;CL:0000566!6.00e-45!172;CL:0000988!1.13e-42!182;CL:0000738!3.34e-41!140;CL:0002032!1.18e-40!165;CL:0000837!1.18e-40!165;CL:0002087!7.81e-34!119;CL:0002031!6.54e-32!124;CL:0000542!2.72e-28!53;CL:0000051!2.72e-28!53;CL:0000838!1.30e-27!52;CL:0000763!4.20e-15!112;CL:0000049!4.20e-15!112;CL:0000945!1.44e-13!24;CL:0000826!1.44e-13!24;CL:0000084!2.43e-13!25;CL:0000827!2.43e-13!25;CL:0000766!3.84e-12!76;CL:0000791!2.37e-11!18;CL:0000789!2.37e-11!18;CL:0002420!2.37e-11!18;CL:0002419!2.37e-11!18;CL:0000790!2.37e-11!18;CL:0000557!5.31e-10!71;CL:0000236!7.59e-10!14;CL:0002009!8.17e-09!65;CL:0000134!2.13e-08!358;CL:0002194!4.02e-08!63;CL:0000576!4.02e-08!63;CL:0000040!4.02e-08!63;CL:0000559!4.02e-08!63;CL:0000839!6.32e-08!70;CL:0002320!1.49e-07!365;CL:0000625!2.50e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.62e-27;53!CL:0000945;2.08e-22;24!CL:0000084;3.63e-20;25!CL:0000791;6.35e-20;18!CL:0000789;6.35e-20;18!CL:0002419;6.35e-20;18!CL:0000236;4.42e-16;13!CL:0000625;2.04e-12;11!CL:0002087;7.26e-11;104!CL:0000738;3.97e-10;136!CL:0000094;2.41e-09;8!CL:0000988;5.43e-09;177!CL:0000624;3.00e-08;6!CL:0000081;1.30e-07;11!CL:0000840;6.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.53e-55,168;CL:0000988,2.58e-53,177;CL:0000738,2.68e-50,136;CL:0002032,1.21e-48,161;CL:0000837,1.21e-48,161;CL:0000542,1.26e-46,53;CL:0000051,1.26e-46,53;CL:0000838,2.23e-45,52;CL:0002087,6.90e-40,115;CL:0002031,1.19e-36,120;CL:0000945,7.42e-23,24;CL:0000826,7.42e-23,24;CL:0000084,5.68e-20,25;CL:0000827,5.68e-20,25;CL:0000791,1.10e-19,18;CL:0000789,1.10e-19,18;CL:0002420,1.10e-19,18;CL:0002419,1.10e-19,18;CL:0000790,1.10e-19,18;CL:0000236,6.74e-17,14;CL:0000763,3.01e-12,108;CL:0000049,3.01e-12,108;CL:0000625,3.03e-12,11;CL:0000134,6.26e-12,354;CL:0002320,3.92e-11,361;CL:0000094,1.44e-09,8;CL:0000219,9.48e-09,386;CL:0000624,3.45e-08,6;CL:0000766,3.57e-08,72;CL:0000081,7.81e-08,11;CL:0000034,6.67e-07,441;CL:0000840,7.06e-07,5;CL:0001029,7.06e-07,5;CL:0000048,8.68e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;7.62e-27;53!CL:0000790;6.35e-20;18 | |||
|ontology_enrichment_disease=DOID:2531!1.67e-10!51;DOID:0060083!1.67e-10!51;DOID:1240!2.42e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.79e-07;51!DOID:0060083;2.79e-07;51!DOID:0060058;3.95e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.47e-11,51;DOID:0060083,4.47e-11,51;DOID:0060058,1.99e-07,10;DOID:1240,4.29e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-15!102;UBERON:0003061!1.00e-15!102;UBERON:0002193!5.56e-15!112;UBERON:0000178!3.84e-08!15;UBERON:0000179!3.84e-08!15;UBERON:0000463!3.84e-08!15;UBERON:0002371!1.04e-07!80;UBERON:0002405!4.49e-07!115;UBERON:0002384!4.59e-07!375;UBERON:0001474!6.42e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.68e-13;15!UBERON:0000179;8.68e-13;15!UBERON:0000463;8.68e-13;15!UBERON:0002390;1.88e-10;32!UBERON:0002193;1.93e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.03e-15,108;UBERON:0002390,3.83e-15,98;UBERON:0003061,3.83e-15,98;UBERON:0000178,1.15e-12,15;UBERON:0000179,1.15e-12,15;UBERON:0000463,1.15e-12,15;UBERON:0002384,4.59e-10,371;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0002405,2.70e-08,93 | |||
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| ||
|short_description=p3@GIT2 | |||
}} | }} |
Latest revision as of 07:38, 16 September 2015
Short description: | p3@GIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GIT2_5end |
Coexpression cluster: | C3220_Dendritic_Burkitt_thymus_CD4_CD34_lymphoma_CD8 |
Association with transcript: | -13bp_to_ENST00000551494_5end |
EntrezGene: | GIT2 |
HGNC: | 4273 |
UniProt: | F8VVT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.03e-15 | 108 |
hematopoietic system | 3.83e-15 | 98 |
blood island | 3.83e-15 | 98 |
blood | 1.15e-12 | 15 |
haemolymphatic fluid | 1.15e-12 | 15 |
organism substance | 1.15e-12 | 15 |
connective tissue | 4.59e-10 | 371 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
immune system | 2.70e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.47e-11 | 51 |
immune system cancer | 4.47e-11 | 51 |
lymphoma | 1.99e-07 | 10 |
leukemia | 4.29e-07 | 39 |