FFCP PHASE1:Hg19::chr16:30393867..30393903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1731 | |EntrezGene=1731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2879 | |HGNC=2879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc002dxx.2_5end | |association_with_transcript=15bp_to_uc002dxx.2_5end | ||
|cluster_id=chr16:30393867..30393903,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_SEPT1_5end | |description=CAGE_peak_1_at_SEPT1_5end | ||
|id=chr16:30393867..30393903,- | |id=chr16:30393867..30393903,- | ||
|ontology_enrichment_celltype=CL:0000738!2.11e-52!140;CL:0000037!3.64e-52!172;CL:0000566!3.64e-52!172;CL:0000988!8.14e-49!182;CL:0002032!6.39e-47!165;CL:0000837!6.39e-47!165;CL:0002031!1.37e-42!124;CL:0002087!1.39e-42!119;CL:0000542!4.54e-42!53;CL:0000051!4.54e-42!53;CL:0000838!2.20e-41!52;CL:0000084!5.10e-21!25;CL:0000827!5.10e-21!25;CL:0000945!8.51e-19!24;CL:0000826!8.51e-19!24;CL:0000791!4.64e-17!18;CL:0000789!4.64e-17!18;CL:0002420!4.64e-17!18;CL:0002419!4.64e-17!18;CL:0000790!4.64e-17!18;CL:0000763!4.39e-13!112;CL:0000049!4.39e-13!112;CL:0000236!1.10e-11!14;CL:0000625!2.54e-11!11;CL:0000766!3.92e-10!76;CL:0000557!7.00e-09!71;CL:0000839!2.06e-08!70;CL:0002057!2.21e-08!42;CL:0002009!7.87e-08!65;CL:0000860!9.02e-08!45;CL:0000134!2.69e-07!358;CL:0000451!3.16e-07!10;CL:0002194!4.07e-07!63;CL:0000576!4.07e-07!63;CL:0000040!4.07e-07!63;CL:0000559!4.07e-07!63 | |ontology_enrichment_celltype=CL:0000738!2.11e-52!140;CL:0000037!3.64e-52!172;CL:0000566!3.64e-52!172;CL:0000988!8.14e-49!182;CL:0002032!6.39e-47!165;CL:0000837!6.39e-47!165;CL:0002031!1.37e-42!124;CL:0002087!1.39e-42!119;CL:0000542!4.54e-42!53;CL:0000051!4.54e-42!53;CL:0000838!2.20e-41!52;CL:0000084!5.10e-21!25;CL:0000827!5.10e-21!25;CL:0000945!8.51e-19!24;CL:0000826!8.51e-19!24;CL:0000791!4.64e-17!18;CL:0000789!4.64e-17!18;CL:0002420!4.64e-17!18;CL:0002419!4.64e-17!18;CL:0000790!4.64e-17!18;CL:0000763!4.39e-13!112;CL:0000049!4.39e-13!112;CL:0000236!1.10e-11!14;CL:0000625!2.54e-11!11;CL:0000766!3.92e-10!76;CL:0000557!7.00e-09!71;CL:0000839!2.06e-08!70;CL:0002057!2.21e-08!42;CL:0002009!7.87e-08!65;CL:0000860!9.02e-08!45;CL:0000134!2.69e-07!358;CL:0000451!3.16e-07!10;CL:0002194!4.07e-07!63;CL:0000576!4.07e-07!63;CL:0000040!4.07e-07!63;CL:0000559!4.07e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.98e-32;53!CL:0000084;3.77e-28;25!CL:0000945;7.17e-25;24!CL:0000791;1.60e-22;18!CL:0000789;1.60e-22;18!CL:0002419;1.60e-22;18!CL:0000625;9.54e-15;11!CL:0000236;2.10e-14;13!CL:0002087;1.02e-11;104!CL:0000738;1.20e-08;136!CL:0000624;2.89e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.06e-56,53;CL:0000051,1.06e-56,53;CL:0000838,8.99e-56,52;CL:0000738,4.48e-45,136;CL:0000037,2.22e-42,168;CL:0000988,9.57e-41,177;CL:0002087,9.16e-37,115;CL:0002032,1.49e-36,161;CL:0000837,1.49e-36,161;CL:0002031,1.82e-33,120;CL:0000084,3.84e-28,25;CL:0000827,3.84e-28,25;CL:0000945,7.17e-25,24;CL:0000826,7.17e-25,24;CL:0000791,1.62e-22,18;CL:0000789,1.62e-22,18;CL:0002420,1.62e-22,18;CL:0002419,1.62e-22,18;CL:0000790,1.62e-22,18;CL:0000236,3.03e-15,14;CL:0000625,9.39e-15,11;CL:0000624,2.97e-08,6;CL:0000134,5.09e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;3.98e-32;53!CL:0000790;1.60e-22;18 | |||
|ontology_enrichment_disease=DOID:2531!3.63e-07!51;DOID:0060083!3.63e-07!51;DOID:0060058!8.36e-07!10 | |ontology_enrichment_disease=DOID:2531!3.63e-07!51;DOID:0060083!3.63e-07!51;DOID:0060058!8.36e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.19e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.17e-09,10;DOID:2531,5.12e-07,51;DOID:0060083,5.12e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.33e-18!102;UBERON:0003061!4.33e-18!102;UBERON:0002193!9.00e-17!112;UBERON:0007023!1.70e-15!115;UBERON:0000178!1.19e-10!15;UBERON:0000179!1.19e-10!15;UBERON:0000463!1.19e-10!15;UBERON:0002405!6.86e-08!115;UBERON:0002371!9.02e-08!80;UBERON:0004177!5.19e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!4.33e-18!102;UBERON:0003061!4.33e-18!102;UBERON:0002193!9.00e-17!112;UBERON:0007023!1.70e-15!115;UBERON:0000178!1.19e-10!15;UBERON:0000179!1.19e-10!15;UBERON:0000463!1.19e-10!15;UBERON:0002405!6.86e-08!115;UBERON:0002371!9.02e-08!80;UBERON:0004177!5.19e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.13e-14;15!UBERON:0000179;4.13e-14;15!UBERON:0000463;4.13e-14;15!UBERON:0002390;3.03e-12;32!UBERON:0002193;2.82e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.47e-14,15;UBERON:0000179,4.47e-14,15;UBERON:0000463,4.47e-14,15;UBERON:0002390,1.71e-09,98;UBERON:0003061,1.71e-09,98;UBERON:0004177,6.18e-09,7;UBERON:0005057,6.18e-09,7;UBERON:0002193,6.78e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.7486575696213,53.8579866791644,63.8344436453939,16.9146639045029,22.6459344877355,11.9208414953379,0,0,0,54.7693108102733,26.7278157076352,7.92721186204087,12.7418943962332,12.0326668482085,11.9355978893719,4.47830948479849,9.06902264853143,3.8636335145128,0.436194716338694,0.755751887377619,0.242584061187816,0.464858073811369,1.23350366406548,0.929119112685311,1.1507695692886,0.768482119587302,0.236482229888585,2.75796544589295,1.29096936716765,0,0.376484679085209,0.545812300115692,0.224723484445085,0.918251677112708,0.962787081228281,0,0.659702600373432,0.598390972864896,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.434377689410233,1.81619850790011,1.47311054395026,0.632924774881769,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0.182664153764634,56.3187982276233,45.3295047347569,61.3761385165853,45.2334035920498,78.0772174720224,64.9470257148566,56.8498590594981,61.0594402902633,30.1682873628008,28.774622279176,27.5236724250165,2.64342657158052,10.0891541336676,7.90152254325231,58.6195114939223,52.6634422083881,65.3812766818439,156.152186694893,71.3769763927563,75.2782011118226,109.10296790843,163.104908879894,86.0249249826525,87.727422255114,121.861738694257,131.934059317445,125.637329742842,134.839081775014,142.872959195284,190.690430413665,102.317728581822,77.5868401460168,116.034431423524,155.233799495666,74.7279962523746,88.6558809345185,118.160196173108,86.6497926961543,104.824436070883,81.7388758225602,133.560130621984,140.529299047551,99.9445812418767,97.0786733380469,96.0719756397625,65.7237982912628,55.6275607229695,59.088356784182,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.22664428346111,0,0,1.29818957461873,0.696518949197069,0.398873881556595,52.7064279714806,38.3236590222686,52.7469651887982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,70.6340959063441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.968532774145487,0.829312462163088,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,68.2598526920581,66.0053046676456,54.7694040143174,49.9254411128221,0,0,0,0,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2483575902979,32.7885585244298,39.0622861560606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,1.0457418040996,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.97701981631236,0,0,0,0,90.3256744433262,61.9356137785324,42.7235390380622,63.6078840472297,62.1157032360153,76.5198507207406,79.3846212740029,55.5187623405989,0,0,0,21.7389714897091,7.50199907477513,161.634268087597,87.5250237281235,2.19537308576098,1.1490322207942,0.211673582723883,0,25.2717460302113,2.05411211129873,2.82023812391442,12.5317238545034,1.18504244461122,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.293016358543788,0,73.8869637759682,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0,2.19172787076177,43.9291425694525,0,0,31.7558798089559,0,0,0,0,1.38100767891707,47.896618469388,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,1.92375646259493,0,0,0,0,0.638002319463839,0.0915975934018623,1.06606955203727,153.289947293605,0.470940769185074,0,0,0.19606253431774,0,0,0.476809736941136,0,0,0,0,6.96683351754953,5.39591143470369,7.94339188413713,0,2.10058696209055,3.13265848516366,0.269604531922708,1.60515529459758,0,37.7681413676429,0,0,0,7.25944296291983,0,2.0851571277401,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0.0967563312890851,0,0,3.87956065953678,0,0,0,0,0.189932387867636,0,0,3.84215390530835,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0,3.83239764200917,0,76.7631074495598,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0.0824158583811665,0,0,8.97537319897315,0,0.272406812223151,0,0,0,2.249738915515,6.1904156364636,0.182248669974074,0,1.49730843868477,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,0,0,0.26446520348538,0,0,3.31040978959853,2.20086027139532,8.28478110694391,27.2891311996573,0,37.8774980964586,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.620964029413834,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,4.25167489002762,12.1038391749325,0,0,0,42.5973153171001,0,24.6267420914966,0,0,0,1.86623178009892,0,0,0,0,0.169732529954025,0,0,0,0,15.8512107452519,0,0,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| ||
|short_description=p1@SEPT1 | |short_description=p1@SEPT1 | ||
}} | }} |
Latest revision as of 07:37, 16 September 2015
Short description: | p1@SEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPT1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 15bp_to_uc002dxx.2_5end |
EntrezGene: | SEPT1 |
HGNC: | 2879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.06e-56 | 53 |
common lymphoid progenitor | 1.06e-56 | 53 |
lymphoid lineage restricted progenitor cell | 8.99e-56 | 52 |
leukocyte | 4.48e-45 | 136 |
hematopoietic stem cell | 2.22e-42 | 168 |
hematopoietic cell | 9.57e-41 | 177 |
nongranular leukocyte | 9.16e-37 | 115 |
hematopoietic oligopotent progenitor cell | 1.49e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-36 | 161 |
hematopoietic lineage restricted progenitor cell | 1.82e-33 | 120 |
T cell | 3.84e-28 | 25 |
pro-T cell | 3.84e-28 | 25 |
lymphocyte of B lineage | 7.17e-25 | 24 |
pro-B cell | 7.17e-25 | 24 |
mature alpha-beta T cell | 1.62e-22 | 18 |
alpha-beta T cell | 1.62e-22 | 18 |
immature T cell | 1.62e-22 | 18 |
mature T cell | 1.62e-22 | 18 |
immature alpha-beta T cell | 1.62e-22 | 18 |
B cell | 3.03e-15 | 14 |
CD8-positive, alpha-beta T cell | 9.39e-15 | 11 |
CD4-positive, alpha-beta T cell | 2.97e-08 | 6 |
mesenchymal cell | 5.09e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
blood | 4.47e-14 | 15 |
haemolymphatic fluid | 4.47e-14 | 15 |
organism substance | 4.47e-14 | 15 |
hematopoietic system | 1.71e-09 | 98 |
blood island | 1.71e-09 | 98 |
hemopoietic organ | 6.18e-09 | 7 |
immune organ | 6.18e-09 | 7 |
hemolymphoid system | 6.78e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.17e-09 | 10 |
hematologic cancer | 5.12e-07 | 51 |
immune system cancer | 5.12e-07 | 51 |