FFCP PHASE1:Hg19::chr9:136215087..136215128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6130 | |EntrezGene=6130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10364 | |HGNC=10364 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8U3 | |UniProt=Q5T8U3 | ||
|association_with_transcript=0bp_to_ENST00000426651,ENST00000468019_5end | |association_with_transcript=0bp_to_ENST00000426651,ENST00000468019_5end | ||
|cluster_id=chr9:136215087..136215128,+ | |||
|description=CAGE_peak_2_at_RPL7A_5end | |description=CAGE_peak_2_at_RPL7A_5end | ||
|id=chr9:136215087..136215128,+ | |id=chr9:136215087..136215128,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.78e-34!682;CL:0000548!8.28e-34!679;CL:0000004!8.28e-34!679;CL:0000255!8.28e-34!679;CL:0000003!1.86e-24!722;CL:0000144!2.80e-21!625;CL:0002321!7.03e-17!248;CL:0000220!3.10e-16!246;CL:0002371!3.57e-14!591;CL:0000066!1.57e-13!254;CL:0000063!6.46e-13!578;CL:0000055!7.37e-10!180;CL:0000393!1.44e-09!60;CL:0000211!1.44e-09!60;CL:0000222!4.01e-09!119;CL:0000076!5.25e-09!62;CL:0000680!4.41e-08!57;CL:0000056!4.41e-08!57;CL:0000355!4.41e-08!57;CL:0000187!1.59e-07!54;CL:0000183!3.17e-07!59;CL:0000192!6.07e-07!42;CL:0000514!6.07e-07!42 | |ontology_enrichment_celltype=CL:0000012!1.78e-34!682;CL:0000548!8.28e-34!679;CL:0000004!8.28e-34!679;CL:0000255!8.28e-34!679;CL:0000003!1.86e-24!722;CL:0000144!2.80e-21!625;CL:0002321!7.03e-17!248;CL:0000220!3.10e-16!246;CL:0002371!3.57e-14!591;CL:0000066!1.57e-13!254;CL:0000063!6.46e-13!578;CL:0000055!7.37e-10!180;CL:0000393!1.44e-09!60;CL:0000211!1.44e-09!60;CL:0000222!4.01e-09!119;CL:0000076!5.25e-09!62;CL:0000680!4.41e-08!57;CL:0000056!4.41e-08!57;CL:0000355!4.41e-08!57;CL:0000187!1.59e-07!54;CL:0000183!3.17e-07!59;CL:0000192!6.07e-07!42;CL:0000514!6.07e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.46e-17,250;CL:0000066,1.44e-13,253;CL:0000393,2.03e-09,61;CL:0000211,2.03e-09,61;CL:0000222,3.73e-09,121;CL:0000076,4.09e-09,63;CL:0000680,5.97e-08,58;CL:0000056,5.97e-08,58;CL:0000355,5.97e-08,58;CL:0000187,2.14e-07,55;CL:0000192,8.53e-07,43;CL:0000514,8.53e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.67e-17!235;DOID:14566!2.87e-17!239;DOID:2531!5.06e-10!51;DOID:0060083!5.06e-10!51;DOID:0050686!3.50e-08!137;DOID:1240!6.38e-08!39;DOID:305!6.42e-07!106;DOID:8692!7.13e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.86e-17,235;DOID:14566,3.20e-17,239;DOID:2531,5.02e-10,51;DOID:0060083,5.02e-10,51;DOID:0050686,3.59e-08,137;DOID:1240,6.34e-08,39;DOID:305,7.07e-07,106;DOID:8692,7.09e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.30e-09!42;UBERON:0003509!3.30e-09!42;UBERON:0004572!3.30e-09!42;UBERON:0000486!9.91e-08!82;UBERON:0004290!2.59e-07!70;UBERON:0004573!2.68e-07!33;UBERON:0004571!2.68e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.32e-07;42!UBERON:0003509;3.32e-07;42!UBERON:0004572;3.32e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.30e-09,42;UBERON:0003509,3.30e-09,42;UBERON:0004572,3.30e-09,42;UBERON:0000486,1.02e-07,83;UBERON:0007503,1.74e-07,78;UBERON:0004573,2.69e-07,33;UBERON:0004571,2.69e-07,33;UBERON:0002329,2.71e-07,71;UBERON:0003059,2.71e-07,71;UBERON:0007282,2.71e-07,71;UBERON:0004290,2.71e-07,71;UBERON:0009618,2.71e-07,71;UBERON:0000490,2.97e-07,148;UBERON:0007500,5.19e-07,59;UBERON:0001981,5.19e-07,59;UBERON:0004537,5.19e-07,59;UBERON:0006965,5.19e-07,59;UBERON:0003077,5.93e-07,72;UBERON:0007285,5.93e-07,72;UBERON:0007524,6.62e-07,73;UBERON:0002049,8.81e-07,78;UBERON:0007798,8.81e-07,78 | |||
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| ||
|short_description=p2@RPL7A | |short_description=p2@RPL7A | ||
}} | }} |
Latest revision as of 06:46, 16 September 2015
Short description: | p2@RPL7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL7A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426651, ENST00000468019_5end |
EntrezGene: | RPL7A |
HGNC: | 10364 |
UniProt: | Q5T8U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.46e-17 | 250 |
epithelial cell | 1.44e-13 | 253 |
electrically responsive cell | 2.03e-09 | 61 |
electrically active cell | 2.03e-09 | 61 |
mesodermal cell | 3.73e-09 | 121 |
squamous epithelial cell | 4.09e-09 | 63 |
muscle precursor cell | 5.97e-08 | 58 |
myoblast | 5.97e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.97e-08 | 58 |
muscle cell | 2.14e-07 | 55 |
smooth muscle cell | 8.53e-07 | 43 |
smooth muscle myoblast | 8.53e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 3.30e-09 | 42 |
arterial blood vessel | 3.30e-09 | 42 |
arterial system | 3.30e-09 | 42 |
multilaminar epithelium | 1.02e-07 | 83 |
epithelial vesicle | 1.74e-07 | 78 |
systemic artery | 2.69e-07 | 33 |
systemic arterial system | 2.69e-07 | 33 |
somite | 2.71e-07 | 71 |
presomitic mesoderm | 2.71e-07 | 71 |
presumptive segmental plate | 2.71e-07 | 71 |
dermomyotome | 2.71e-07 | 71 |
trunk paraxial mesoderm | 2.71e-07 | 71 |
unilaminar epithelium | 2.97e-07 | 148 |
epithelial tube open at both ends | 5.19e-07 | 59 |
blood vessel | 5.19e-07 | 59 |
blood vasculature | 5.19e-07 | 59 |
vascular cord | 5.19e-07 | 59 |
paraxial mesoderm | 5.93e-07 | 72 |
presumptive paraxial mesoderm | 5.93e-07 | 72 |
dense mesenchyme tissue | 6.62e-07 | 73 |
vasculature | 8.81e-07 | 78 |
vascular system | 8.81e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.86e-17 | 235 |
disease of cellular proliferation | 3.20e-17 | 239 |
hematologic cancer | 5.02e-10 | 51 |
immune system cancer | 5.02e-10 | 51 |
organ system cancer | 3.59e-08 | 137 |
leukemia | 6.34e-08 | 39 |
carcinoma | 7.07e-07 | 106 |
myeloid leukemia | 7.09e-07 | 31 |