FFCP PHASE1:Hg19::chr11:121323060..121323071,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:121323060..121323071,+
|short_description=p6@SORL1
|description=CAGE_peak_6_at_SORL1_5end
|association_with_transcript=-17bp_to_ENST00000532451_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6653 | |EntrezGene=6653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |HGNC=11185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000532451_5end | |||
|cluster_id=chr11:121323060..121323071,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_SORL1_5end | |||
|id=chr11:121323060..121323071,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.27e-19!140;CL:0002087!6.47e-17!119;CL:0002031!9.50e-14!124;CL:0000838!1.18e-13!52;CL:0000037!1.20e-13!172;CL:0000566!1.20e-13!172;CL:0000542!4.18e-13!53;CL:0000051!4.18e-13!53;CL:0000791!7.39e-12!18;CL:0000789!7.39e-12!18;CL:0002420!7.39e-12!18;CL:0002419!7.39e-12!18;CL:0000790!7.39e-12!18;CL:0002032!7.73e-12!165;CL:0000837!7.73e-12!165;CL:0000988!2.96e-11!182;CL:0002057!4.02e-10!42;CL:0000084!5.90e-10!25;CL:0000827!5.90e-10!25;CL:0000860!1.07e-08!45;CL:0000625!1.31e-08!11;CL:0000094!3.14e-08!8;CL:0000766!1.28e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.01e-19;18!CL:0000789;6.01e-19;18!CL:0002419;6.01e-19;18!CL:0000084;2.49e-15;25!CL:0000625;4.47e-13;11!CL:0000094;1.32e-12;8!CL:0000624;5.77e-09;6!CL:0000081;1.44e-08;11!CL:0000542;6.78e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.31e-19,18;CL:0000789,4.31e-19,18;CL:0002420,4.31e-19,18;CL:0002419,4.31e-19,18;CL:0000790,4.31e-19,18;CL:0000738,5.23e-17,136;CL:0000084,3.00e-15,25;CL:0000827,3.00e-15,25;CL:0000838,1.07e-14,52;CL:0000542,3.03e-14,53;CL:0000051,3.03e-14,53;CL:0000625,3.03e-13,11;CL:0002087,6.29e-13,115;CL:0000094,1.29e-12,8;CL:0000037,1.57e-12,168;CL:0000988,4.56e-11,177;CL:0002032,4.33e-10,161;CL:0000837,4.33e-10,161;CL:0002031,1.01e-09,120;CL:0000624,6.04e-09,6;CL:0000081,1.42e-08,11;CL:0000047,7.30e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;6.01e-19;18!CL:0000051;6.78e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-33!115;UBERON:0001017!9.29e-23!82;UBERON:0001049!1.74e-21!57;UBERON:0005068!1.74e-21!57;UBERON:0006241!1.74e-21!57;UBERON:0007135!1.74e-21!57;UBERON:0005743!2.80e-21!86;UBERON:0000073!5.64e-18!94;UBERON:0001016!5.64e-18!94;UBERON:0002616!1.65e-17!59;UBERON:0002780!3.00e-17!41;UBERON:0001890!3.00e-17!41;UBERON:0006240!3.00e-17!41;UBERON:0003080!1.75e-16!42;UBERON:0000955!2.57e-16!69;UBERON:0006238!2.57e-16!69;UBERON:0001893!4.97e-14!34;UBERON:0002020!1.07e-13!34;UBERON:0003528!1.07e-13!34;UBERON:0002791!2.46e-13!33;UBERON:0001869!1.11e-12!32;UBERON:0003075!2.09e-11!86;UBERON:0007284!2.09e-11!86;UBERON:0002619!1.65e-10!22;UBERON:0002346!4.30e-10!90;UBERON:0000956!8.35e-10!25;UBERON:0000203!8.35e-10!25;UBERON:0001950!2.57e-09!20;UBERON:0003056!2.85e-08!61;UBERON:0000178!1.52e-07!15;UBERON:0000179!1.52e-07!15;UBERON:0000463!1.52e-07!15;UBERON:0000153!3.07e-07!129;UBERON:0007811!3.07e-07!129;UBERON:0002390!3.92e-07!102;UBERON:0003061!3.92e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.77e-14;53!UBERON:0002616;1.77e-14;53!UBERON:0002780;1.66e-13;41!UBERON:0001890;1.66e-13;41!UBERON:0000178;9.50e-13;15!UBERON:0000179;9.50e-13;15!UBERON:0000463;9.50e-13;15!UBERON:0002619;3.96e-12;22!UBERON:0001893;2.81e-11;34!UBERON:0003528;6.01e-11;34!UBERON:0002020;6.01e-11;34!UBERON:0001869;8.29e-11;32!UBERON:0002791;1.52e-10;32!UBERON:0001950;3.16e-10;20!UBERON:0000956;3.56e-10;25!UBERON:0000203;3.56e-10;25!UBERON:0001017;2.88e-09;75!UBERON:0001016;3.54e-09;83!UBERON:0000955;3.87e-09;68!UBERON:0004732;7.55e-09;13!UBERON:0004733;1.22e-07;12!UBERON:0002028;1.22e-07;12!UBERON:0002298;1.32e-07;6!UBERON:0007023;3.55e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.40e-28,81;UBERON:0001049,3.71e-26,56;UBERON:0005068,3.71e-26,56;UBERON:0006241,3.71e-26,56;UBERON:0007135,3.71e-26,56;UBERON:0001016,5.17e-25,89;UBERON:0000073,1.05e-23,53;UBERON:0002616,1.05e-23,53;UBERON:0007023,1.22e-22,114;UBERON:0000955,3.50e-19,68;UBERON:0006238,3.50e-19,68;UBERON:0002780,3.62e-17,41;UBERON:0001890,3.62e-17,41;UBERON:0003080,3.62e-17,41;UBERON:0006240,3.62e-17,41;UBERON:0003075,3.48e-15,82;UBERON:0007284,3.48e-15,82;UBERON:0002346,6.28e-14,86;UBERON:0001893,2.08e-13,34;UBERON:0003528,5.48e-13,34;UBERON:0002020,5.48e-13,34;UBERON:0000178,1.12e-12,15;UBERON:0000179,1.12e-12,15;UBERON:0000463,1.12e-12,15;UBERON:0002619,5.00e-12,22;UBERON:0001869,1.60e-11,32;UBERON:0002791,1.92e-11,32;UBERON:0003076,2.01e-10,15;UBERON:0003057,2.01e-10,15;UBERON:0001950,3.29e-10,20;UBERON:0000956,4.34e-10,25;UBERON:0000203,4.34e-10,25;UBERON:0003056,5.25e-10,61;UBERON:0010371,1.40e-09,104;UBERON:0004732,3.58e-09,13;UBERON:0002298,5.82e-08,6;UBERON:0004733,5.99e-08,12;UBERON:0002028,5.99e-08,12;UBERON:0007277,5.99e-08,12;UBERON:0004121,2.71e-07,171;UBERON:0000924,2.71e-07,171;UBERON:0006601,2.71e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,1.06978768047132,0.656804715599566,1.57421562627358,7.86728553697808,4.22212337906934,2.63187409637329,0,0,0,1.31694240986513,0.995184627411951,1.17440175733939,1.66198622559563,2.00544447470142,2.60413044859022,0,0,0.257575567634187,1.59938062657521,0.377875943688809,2.18325655069035,0.232429036905685,0.822335776043652,1.23882548358041,1.1507695692886,1.0246428261164,0.709446689665756,1.37898272294647,0.645484683583826,0,1.31769637679823,0.818718450173537,0.449446968890169,1.22433556948361,0,3.19668562899521,1.64925650093358,0.997318288108159,0.426224750532694,0.580418477257168,2.8369261234557,0.622822248995575,0.251248665256743,1.5644487552606,1.95469960234605,0,0.736555271975129,0.949387162322653,0.845021145247767,0.212604299965044,0,0.561643155732475,0.300353785683013,0.964353520182481,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.764546456250458,2.64342657158052,0.560508562981536,0.263384084775077,7.08155172409799,8.25322601773246,5.14003747498773,1.67186495390678,3.2592226663359,3.78758244587787,5.84480185223734,2.89667187901451,7.36514768687093,7.08908462667588,6.22848886659536,0.384273959177026,0.650296737799391,1.64437904603676,2.76350017785848,1.73881851441031,3.70716407905151,4.81573490561484,3.1360657141493,2.71942422474159,1.53288197440768,3.77990190030893,5.31341353240956,3.50421955756506,1.95325036156926,1.90090408889675,2.40920190524436,1.27986611154418,2.49861453104692,3.07810427657222,3.28451198768419,4.23374160771938,3.4767225451856,5.21367853978076,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,1.43094374583205,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.9367961949497,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.853815942907168,0.795178609928912,0.69716365721711,0.518305275076852,1.7662459561294,3.28479623168247,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,1.96565443335525,2.95394953340702,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,8.07826116827902,4.52817907204986,7.18721003166591,1.52456774533478,1.30139853857622,5.41302168944387,3.85287410269002,1.27587750330633,29.9602809578873,44.8742188806037,37.2973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,2.37285620900479,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,1.22386941009813,0.43050537267123,0,0.443430153536676,0.229723400206959,9.64150457541122,9.94028369285088,9.1143549947866,6.4322579373603,3.29089818468955,7.13320642311989,8.10047155857172,8.72437693923697,0,1.92495971052672,0,0,0.144269212976445,0,0,0,0.383010740264733,1.05836791361941,0.324621940274555,0,0,0,0,0,0,0.80719882876419,0.851692475380653,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0,0,0,2.98244294329889,1.1253553312841,0,0.16480387422676,0,0.398495976502139,1.38141957765574,0,0.613612095012929,1.72318727645497,0,0.269605053441981,0,0,0.394573622547734,4.7896618469388,0,3.87733098438087,2.22643435588443,1.99613798001194,0,0.262379999988587,0,0.568967241427498,0.762760950878299,0.709163045303809,0,0,0.173624994933292,0.885741385813839,0.361789315876224,4.5774520895125,1.65868889896837,5.31985714116385,1.97446857438575,0,0.41827123283581,0.692552326534174,0.113942055847001,0,0.179515288819544,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,5.72909630335755,0.802577647298789,3.04543779442941,0.364909578431332,0.391329237864179,0,0.394584402849391,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.20390222730132,0,0,0,0.290967049465258,0.176512253383001,0.451961481561065,0,0,2.53243183823515,0.195551382734803,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,1.80126086612937,1.36905378891993,8.94226116468806,0.429765441419957,2.10309883423452,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.134366944973453,0,0,0.472699093843342,0.412079291905832,0.539228350833479,0,1.18542664892098,3.18091875923721,2.04305109167363,2.41129722697529,1.51293380256957,0.83088067605837,0,0,2.42998226632099,0.670869375198532,0.157611414598396,0.314727528809989,0.528001682597033,0.179287339332845,0,0.714695326373367,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0,2.93104467356165,2.6501377782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| ||
|short_description=p6@SORL1 | |||
}} | }} |
Latest revision as of 06:41, 16 September 2015
Short description: | p6@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SORL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -17bp_to_ENST00000532451_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.31e-19 | 18 |
alpha-beta T cell | 4.31e-19 | 18 |
immature T cell | 4.31e-19 | 18 |
mature T cell | 4.31e-19 | 18 |
immature alpha-beta T cell | 4.31e-19 | 18 |
leukocyte | 5.23e-17 | 136 |
T cell | 3.00e-15 | 25 |
pro-T cell | 3.00e-15 | 25 |
lymphoid lineage restricted progenitor cell | 1.07e-14 | 52 |
lymphocyte | 3.03e-14 | 53 |
common lymphoid progenitor | 3.03e-14 | 53 |
CD8-positive, alpha-beta T cell | 3.03e-13 | 11 |
nongranular leukocyte | 6.29e-13 | 115 |
granulocyte | 1.29e-12 | 8 |
hematopoietic stem cell | 1.57e-12 | 168 |
hematopoietic cell | 4.56e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.33e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.01e-09 | 120 |
CD4-positive, alpha-beta T cell | 6.04e-09 | 6 |
blood cell | 1.42e-08 | 11 |
neuronal stem cell | 7.30e-07 | 8 |