FFCP PHASE1:Hg19::chr6:152702229..152702236,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:152702229..152702236,-
|short_description=p35@SYNE1
|description=CAGE_peak_35_at_SYNE1_5end
|association_with_transcript=118bp_to_ENST00000471834_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=118bp_to_ENST00000471834_5end | |||
|cluster_id=chr6:152702229..152702236,- | |||
|description=CAGE_peak_35_at_SYNE1_5end | |||
|id=chr6:152702229..152702236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;9.87e-34;6!CL:0000153;6.41e-23;9!CL:0000447;6.41e-23;9!CL:0000746;6.76e-18;3!CL:0000327;3.15e-14;15!CL:0000737;8.81e-14;4!CL:0000499;4.06e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,8.35e-34,6;CL:0000138,8.35e-34,6;CL:0000153,5.74e-23,9;CL:0000447,5.74e-23,9;CL:0000746,6.76e-18,3;CL:0000513,6.76e-18,3;CL:0000327,2.94e-14,15;CL:0000737,8.82e-14,4;CL:0000499,3.92e-08,28 | |||
|ontology_enrichment_development_v019=CL:0000513;6.76e-18;3!UBERON:0007123;3.26e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.99e-50;1!DOID:4549;3.99e-50;1!DOID:5861;3.99e-50;1!DOID:6496;3.99e-50;1!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.42e-50,1;DOID:4549,2.42e-50,1;DOID:5861,2.42e-50,1;DOID:6496,2.42e-50,1;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.45e-18;3!UBERON:0004755;9.45e-18;3!UBERON:0002046;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,8.00e-18,3;UBERON:0004755,8.00e-18,3;UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0,1.5905718941022,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.340906509664404,0.356128142586949,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.51595809741485,0,0,0,0.193978032976839,1.85337866052151,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0.916641696046735,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0.342976018874837,0.203909198930495,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0.297046400327086,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0,0,0.318235791390825,1.21270313374932,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0,1.5905718941022,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.340906509664404,0.356128142586949,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.51595809741485,0,0,0,0.193978032976839,1.85337866052151,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0.916641696046735,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0.342976018874837,0.203909198930495,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0.297046400327086,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0,0,0.318235791390825,1.21270313374932,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p35@SYNE1 | |||
}} | }} |
Latest revision as of 06:41, 16 September 2015
Short description: | p35@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENST00000471834_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.35e-34 | 6 |
chondrocyte | 8.35e-34 | 6 |
GAG secreting cell | 5.74e-23 | 9 |
carbohydrate secreting cell | 5.74e-23 | 9 |
cardiac muscle cell | 6.76e-18 | 3 |
cardiac muscle myoblast | 6.76e-18 | 3 |
extracellular matrix secreting cell | 2.94e-14 | 15 |
striated muscle cell | 8.82e-14 | 4 |
stromal cell | 3.92e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 8.00e-18 | 3 |
skeletal tissue | 8.00e-18 | 3 |
thyroid gland | 3.60e-11 | 5 |
pharyngeal pouch | 3.60e-11 | 5 |
thyroid diverticulum | 3.60e-11 | 5 |
pharyngeal pouch 2 | 3.60e-11 | 5 |
thyroid primordium | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.42e-50 | 1 |
extraosseous chondrosarcoma | 2.42e-50 | 1 |
myxoid chondrosarcoma | 2.42e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 2.42e-50 | 1 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |