FFCP PHASE1:Hg19::chr6:152639507..152639519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000356820,ENST00000367256,uc003qos.3,uc010kiv.2_5end | |association_with_transcript=-28bp_to_ENST00000356820,ENST00000367256,uc003qos.3,uc010kiv.2_5end | ||
|cluster_id=chr6:152639507..152639519,- | |||
|description=CAGE_peak_29_at_SYNE1_5end | |description=CAGE_peak_29_at_SYNE1_5end | ||
|id=chr6:152639507..152639519,- | |id=chr6:152639507..152639519,- | ||
|ontology_enrichment_celltype=CL:0002139!1.64e-16!24;CL:0005020!7.21e-13!6;CL:0002138!7.21e-13!6;CL:0005022!7.21e-13!6;CL:0000213!3.47e-12!57;CL:0000215!3.47e-12!57;CL:0000115!4.74e-10!35;CL:0002078!2.58e-08!44;CL:1000413!3.56e-08!9;CL:0000071!6.59e-08!18;CL:0002546!6.59e-08!18;CL:0000222!1.08e-07!119 | |ontology_enrichment_celltype=CL:0002139!1.64e-16!24;CL:0005020!7.21e-13!6;CL:0002138!7.21e-13!6;CL:0005022!7.21e-13!6;CL:0000213!3.47e-12!57;CL:0000215!3.47e-12!57;CL:0000115!4.74e-10!35;CL:0002078!2.58e-08!44;CL:1000413!3.56e-08!9;CL:0000071!6.59e-08!18;CL:0002546!6.59e-08!18;CL:0000222!1.08e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.74e-20;6!CL:0002139;4.25e-09;24 | |ontology_enrichment_celltype_v019=CL:0002138;1.74e-20;6!CL:0002139;4.25e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.12e-20,6;CL:0002138,2.12e-20,6;CL:0005022,2.12e-20,6;CL:0002139,4.58e-09,24 | |||
|ontology_enrichment_development_v019=CL:0005022;1.74e-20;6!UBERON:0005062;2.33e-14;4!UBERON:0007284;2.33e-14;4!UBERON:0004872;9.69e-09;7 | |ontology_enrichment_development_v019=CL:0005022;1.74e-20;6!UBERON:0005062;2.33e-14;4!UBERON:0007284;2.33e-14;4!UBERON:0004872;9.69e-09;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.80e-08;2 | |ontology_enrichment_disease_v019=DOID:114;6.80e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.84e-15!69;UBERON:0001009!4.79e-13!113;UBERON:0004872!5.08e-13!84;UBERON:0002049!5.30e-12!79;UBERON:0007798!5.30e-12!79;UBERON:0004535!1.06e-10!110;UBERON:0007100!1.85e-10!27;UBERON:0001981!8.37e-10!60;UBERON:0007500!8.37e-10!60;UBERON:0004537!8.37e-10!60;UBERON:0006965!8.37e-10!60;UBERON:0002465!1.36e-09!10;UBERON:0001473!2.03e-09!8;UBERON:0004536!2.03e-09!8;UBERON:0006558!2.03e-09!8;UBERON:0003915!3.56e-08!9;UBERON:0004700!3.56e-08!9;UBERON:0001917!3.56e-08!9;UBERON:0001986!6.59e-08!18;UBERON:0004638!6.59e-08!18;UBERON:0004852!6.59e-08!18;UBERON:0003978!7.11e-08!3;UBERON:0009751!7.11e-08!3;UBERON:0000946!7.11e-08!3;UBERON:0002523!7.11e-08!3;UBERON:0005983!7.11e-08!3;UBERON:0002165!7.11e-08!3;UBERON:0002062!7.11e-08!3;UBERON:0007280!7.11e-08!3;UBERON:0004151!1.03e-07!3;UBERON:0007023!1.46e-07!115;UBERON:0000948!5.45e-07!24;UBERON:0005498!5.45e-07!24;UBERON:0004140!5.45e-07!24;UBERON:0009881!5.45e-07!24;UBERON:0004141!5.45e-07!24;UBERON:0003084!5.45e-07!24;UBERON:0007005!5.45e-07!24;UBERON:0004139!5.45e-07!24;UBERON:0004291!5.45e-07!24 | |ontology_enrichment_uberon=UBERON:0000055!7.84e-15!69;UBERON:0001009!4.79e-13!113;UBERON:0004872!5.08e-13!84;UBERON:0002049!5.30e-12!79;UBERON:0007798!5.30e-12!79;UBERON:0004535!1.06e-10!110;UBERON:0007100!1.85e-10!27;UBERON:0001981!8.37e-10!60;UBERON:0007500!8.37e-10!60;UBERON:0004537!8.37e-10!60;UBERON:0006965!8.37e-10!60;UBERON:0002465!1.36e-09!10;UBERON:0001473!2.03e-09!8;UBERON:0004536!2.03e-09!8;UBERON:0006558!2.03e-09!8;UBERON:0003915!3.56e-08!9;UBERON:0004700!3.56e-08!9;UBERON:0001917!3.56e-08!9;UBERON:0001986!6.59e-08!18;UBERON:0004638!6.59e-08!18;UBERON:0004852!6.59e-08!18;UBERON:0003978!7.11e-08!3;UBERON:0009751!7.11e-08!3;UBERON:0000946!7.11e-08!3;UBERON:0002523!7.11e-08!3;UBERON:0005983!7.11e-08!3;UBERON:0002165!7.11e-08!3;UBERON:0002062!7.11e-08!3;UBERON:0007280!7.11e-08!3;UBERON:0004151!1.03e-07!3;UBERON:0007023!1.46e-07!115;UBERON:0000948!5.45e-07!24;UBERON:0005498!5.45e-07!24;UBERON:0004140!5.45e-07!24;UBERON:0009881!5.45e-07!24;UBERON:0004141!5.45e-07!24;UBERON:0003084!5.45e-07!24;UBERON:0007005!5.45e-07!24;UBERON:0004139!5.45e-07!24;UBERON:0004291!5.45e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.14e-27;2!UBERON:0002106;3.85e-19;3!UBERON:0003978;8.29e-19;3!UBERON:0000946;8.29e-19;3!UBERON:0001473;1.56e-15;8!UBERON:0004536;1.56e-15;8!UBERON:0006558;1.56e-15;8!UBERON:0002134;5.42e-15;1!UBERON:0005208;5.42e-15;1!UBERON:0004145;5.42e-15;1!UBERON:0005946;5.42e-15;1!UBERON:0005965;5.42e-15;1!UBERON:0002078;5.42e-15;1!UBERON:0002135;1.72e-14;1!UBERON:0002465;1.49e-12;10!UBERON:0002405;2.14e-12;27!UBERON:0004177;7.07e-12;5!UBERON:0005057;7.07e-12;5!UBERON:0002081;3.81e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002133;1.14e-27;2!UBERON:0002106;3.85e-19;3!UBERON:0003978;8.29e-19;3!UBERON:0000946;8.29e-19;3!UBERON:0001473;1.56e-15;8!UBERON:0004536;1.56e-15;8!UBERON:0006558;1.56e-15;8!UBERON:0002134;5.42e-15;1!UBERON:0005208;5.42e-15;1!UBERON:0004145;5.42e-15;1!UBERON:0005946;5.42e-15;1!UBERON:0005965;5.42e-15;1!UBERON:0002078;5.42e-15;1!UBERON:0002135;1.72e-14;1!UBERON:0002465;1.49e-12;10!UBERON:0002405;2.14e-12;27!UBERON:0004177;7.07e-12;5!UBERON:0005057;7.07e-12;5!UBERON:0002081;3.81e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,9.31e-28,2;UBERON:0002106,3.52e-19,3;UBERON:0004854,3.52e-19,3;UBERON:0009034,3.52e-19,3;UBERON:0002095,3.52e-19,3;UBERON:0004782,3.52e-19,3;UBERON:0003281,3.52e-19,3;UBERON:0009664,3.52e-19,3;UBERON:0002296,3.52e-19,3;UBERON:0005602,3.52e-19,3;UBERON:0001179,3.52e-19,3;UBERON:0006293,3.52e-19,3;UBERON:0003978,7.26e-19,3;UBERON:0009751,7.26e-19,3;UBERON:0000946,7.26e-19,3;UBERON:0002523,7.26e-19,3;UBERON:0005983,7.26e-19,3;UBERON:0002165,7.26e-19,3;UBERON:0002062,7.26e-19,3;UBERON:0007280,7.26e-19,3;UBERON:0001473,1.81e-15,8;UBERON:0004536,1.81e-15,8;UBERON:0006558,1.81e-15,8;UBERON:0002134,6.22e-15,1;UBERON:0005208,6.22e-15,1;UBERON:0005946,6.22e-15,1;UBERON:0005965,6.22e-15,1;UBERON:0002078,6.22e-15,1;UBERON:0002135,1.23e-14,1;UBERON:0002465,1.68e-12,10;UBERON:0000055,5.03e-09,68;UBERON:0004177,9.33e-09,7;UBERON:0005057,9.33e-09,7;UBERON:0004797,1.27e-08,7;UBERON:0002081,4.09e-08,2;UBERON:0010227,4.09e-08,2;UBERON:0002049,8.59e-08,78;UBERON:0007798,8.59e-08,78;UBERON:0000945,9.08e-08,8;UBERON:0010039,9.08e-08,8;UBERON:0001009,8.22e-07,112 | |||
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|short_description=p29@SYNE1 | |short_description=p29@SYNE1 | ||
}} | }} |
Latest revision as of 06:37, 16 September 2015
Short description: | p29@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000356820, ENST00000367256, uc003qos.3, uc010kiv.2_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.12e-20 | 6 |
endothelial cell of lymphatic vessel | 2.12e-20 | 6 |
vascular lymphangioblast | 2.12e-20 | 6 |
endothelial cell of vascular tree | 4.58e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.37e-08 | 2 |