FFCP PHASE1:Hg19::chr14:77965317..77965338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=145501 | |EntrezGene=145501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23176 | |HGNC=23176 | ||
|TSSclassifier=strong | |||
|UniProt=Q6H9L7 | |UniProt=Q6H9L7 | ||
|association_with_transcript=-107bp_to_ENST00000412904,ENST00000429906,NM_182509,NM_199296,uc001xty.2,uc001xtz.2,uc001xua.2,uc010tvl.1_5end | |||
|cluster_id=chr14:77965317..77965338,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_ISM2_5end | |||
|id=chr14:77965317..77965338,- | |||
|ontology_enrichment_celltype=CL:0002541!1.24e-26!3;CL:0002563!6.61e-19!4;CL:0002253!3.37e-17!2;CL:0000039!1.62e-11!7;CL:0000586!1.62e-11!7;CL:0000181!1.82e-11!12;CL:0000417!1.82e-11!12;CL:0000668!1.82e-11!12;CL:0000414!1.82e-11!12;CL:0000412!1.82e-11!12;CL:0000182!1.82e-11!12;CL:0000223!5.75e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.46e-47;3!CL:0000182;2.03e-20;12!CL:0000039;1.02e-09;7!CL:0000586;1.02e-09;7!CL:0000349;5.88e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.47e-47,3;CL:0000182,2.24e-20,12;CL:0000039,9.52e-10,7;CL:0000586,9.52e-10,7;CL:0000349,5.88e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.09e-22;11!UBERON:0009497;7.01e-19;13!UBERON:0003124;4.72e-17;1!UBERON:0001041;2.33e-08;30!UBERON:0003104;4.95e-08;31 | |||
|ontology_enrichment_disease=DOID:1799!1.06e-09!1;DOID:10165!1.06e-09!1;DOID:1798!1.06e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.93e-16;1!DOID:10165;1.93e-16;1!DOID:1798;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.07e-16,1;DOID:10165,3.07e-16,1;DOID:1798,3.07e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.24e-26!3;UBERON:0000920!1.24e-26!3;UBERON:0003124!3.97e-20!7;UBERON:0001052!6.21e-19!4;UBERON:0001242!6.61e-19!4;UBERON:0001262!6.61e-19!4;UBERON:0004786!6.61e-19!4;UBERON:0004808!6.61e-19!4;UBERON:0001277!6.61e-19!4;UBERON:0004907!2.85e-15!5;UBERON:0003350!2.99e-15!5;UBERON:0005631!3.17e-15!14;UBERON:0000158!3.17e-15!14;UBERON:0000478!8.27e-09!24;UBERON:0000485!1.03e-08!9;UBERON:0004923!2.13e-08!57;UBERON:0002107!2.72e-07!19;UBERON:0006925!2.72e-07!19;UBERON:0008836!2.72e-07!19;UBERON:0000059!3.17e-07!11;UBERON:0000160!3.46e-07!27;UBERON:0003929!8.91e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.46e-47;3!UBERON:0000920;6.46e-47;3!UBERON:0005631;1.34e-14;10!UBERON:0000158;1.34e-14;10!UBERON:0002107;4.93e-13;19!UBERON:0006925;4.93e-13;19!UBERON:0000478;1.10e-10;24!UBERON:0002423;5.60e-10;25!UBERON:0000949;7.27e-08;43!UBERON:0002365;1.05e-07;31!UBERON:0002330;1.05e-07;31!UBERON:0002368;4.72e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.47e-47,3;UBERON:0003124,9.70e-36,7;UBERON:0005631,4.33e-18,14;UBERON:0000158,4.33e-18,14;UBERON:0002107,5.25e-13,19;UBERON:0006925,5.25e-13,19;UBERON:0008836,5.25e-13,19;UBERON:0008835,2.82e-11,22;UBERON:0003894,2.82e-11,22;UBERON:0009854,8.47e-11,23;UBERON:0000478,1.10e-10,24;UBERON:0007499,5.88e-10,25;UBERON:0009497,5.88e-10,25;UBERON:0000015,5.88e-10,25;UBERON:0002423,5.88e-10,25;UBERON:0006235,5.88e-10,25;UBERON:0004161,5.88e-10,25;UBERON:0009856,1.38e-09,26;UBERON:0000949,2.23e-08,45;UBERON:0002365,4.43e-08,31;UBERON:0002330,4.43e-08,31;UBERON:0002368,3.49e-07,35 | |||
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|short_description=p2@ISM2 | |||
}} | }} |
Latest revision as of 06:23, 16 September 2015
Short description: | p2@ISM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ISM2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -107bp_to_ENST00000412904, ENST00000429906, NM_182509, NM_199296, uc001xty.2, uc001xtz.2, uc001xua.2, uc010tvl.1_5end |
EntrezGene: | ISM2 |
HGNC: | 23176 |
UniProt: | Q6H9L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.47e-47 | 3 |
hepatocyte | 2.24e-20 | 12 |
germ line cell | 9.52e-10 | 7 |
germ cell | 9.52e-10 | 7 |
extraembryonic cell | 5.88e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.47e-47 | 3 |
chorion | 9.70e-36 | 7 |
extraembryonic membrane | 4.33e-18 | 14 |
membranous layer | 4.33e-18 | 14 |
liver | 5.25e-13 | 19 |
digestive gland | 5.25e-13 | 19 |
liver bud | 5.25e-13 | 19 |
hepatic diverticulum | 2.82e-11 | 22 |
liver primordium | 2.82e-11 | 22 |
digestive tract diverticulum | 8.47e-11 | 23 |
extraembryonic structure | 1.10e-10 | 24 |
epithelial sac | 5.88e-10 | 25 |
epithelium of foregut-midgut junction | 5.88e-10 | 25 |
anatomical boundary | 5.88e-10 | 25 |
hepatobiliary system | 5.88e-10 | 25 |
foregut-midgut junction | 5.88e-10 | 25 |
septum transversum | 5.88e-10 | 25 |
sac | 1.38e-09 | 26 |
endocrine system | 2.23e-08 | 45 |
exocrine gland | 4.43e-08 | 31 |
exocrine system | 4.43e-08 | 31 |
endocrine gland | 3.49e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.07e-16 | 1 |
endocrine pancreas cancer | 3.07e-16 | 1 |
pancreatic endocrine carcinoma | 3.07e-16 | 1 |