FFCP PHASE1:Hg19::chr20:39995484..39995495,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:39995484..39995495,- to FFCP PHASE1:Hg19::chr20:39995484..39995495,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90187 | |EntrezGene=90187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16123 | |HGNC=16123 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NT22 | |UniProt=Q9NT22 | ||
|association_with_transcript=2bp_to_NM_052846,uc002xjy.1_5end | |||
|cluster_id=chr20:39995484..39995495,- | |||
|coexpression_cluster_id=C4035 | |||
|description=CAGE_peak_3_at_EMILIN3_5end | |||
|id=chr20:39995484..39995495,- | |||
|ontology_enrichment_celltype=CL:0002322!2.90e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.54e-13;5!CL:0002321;2.38e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.58e-13,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.22e-25!90;UBERON:0007023!3.32e-24!115;UBERON:0000073!4.37e-24!94;UBERON:0001016!4.37e-24!94;UBERON:0003075!2.39e-23!86;UBERON:0007284!2.39e-23!86;UBERON:0005743!4.17e-23!86;UBERON:0000924!2.24e-21!173;UBERON:0006601!2.24e-21!173;UBERON:0001017!7.15e-20!82;UBERON:0004121!1.11e-19!169;UBERON:0001049!1.83e-18!57;UBERON:0005068!1.83e-18!57;UBERON:0006241!1.83e-18!57;UBERON:0007135!1.83e-18!57;UBERON:0000153!3.64e-17!129;UBERON:0007811!3.64e-17!129;UBERON:0003056!9.38e-16!61;UBERON:0000033!2.04e-15!123;UBERON:0000955!1.63e-14!69;UBERON:0006238!1.63e-14!69;UBERON:0002616!5.31e-14!59;UBERON:0001893!5.63e-14!34;UBERON:0002020!5.71e-14!34;UBERON:0003528!5.71e-14!34;UBERON:0002780!6.37e-14!41;UBERON:0001890!6.37e-14!41;UBERON:0006240!6.37e-14!41;UBERON:0000956!1.96e-13!25;UBERON:0000203!1.96e-13!25;UBERON:0003080!2.11e-13!42;UBERON:0002791!2.58e-13!33;UBERON:0001869!8.91e-13!32;UBERON:0001950!1.82e-12!20;UBERON:0002619!1.95e-12!22;UBERON:0000064!3.14e-11!219;UBERON:0000922!1.46e-10!612;UBERON:0000468!1.36e-08!659;UBERON:0000481!1.68e-08!347;UBERON:0000062!6.92e-08!511;UBERON:0002050!1.65e-07!605;UBERON:0005423!1.65e-07!605;UBERON:0000966!4.05e-07!5;UBERON:0005388!4.05e-07!5;UBERON:0001802!4.05e-07!5;UBERON:0000923!4.26e-07!604;UBERON:0005291!4.26e-07!604;UBERON:0006598!4.26e-07!604;UBERON:0002532!4.26e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.60e-11;49!UBERON:0000966;2.91e-08;5!UBERON:0005388;2.91e-08;5!UBERON:0001802;2.91e-08;5!UBERON:0000020;5.29e-08;23!UBERON:0001032;1.25e-07;24!UBERON:0004456;1.25e-07;24!UBERON:0000970;5.26e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,1.12e-07,24;UBERON:0001032,1.12e-07,24;UBERON:0004456,1.12e-07,24;UBERON:0000966,6.09e-07,6;UBERON:0005388,6.09e-07,6;UBERON:0001802,6.09e-07,6 | |||
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| ||
|short_description=p3@EMILIN3 | |||
}} | }} |
Latest revision as of 05:59, 16 September 2015
Short description: | p3@EMILIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMILIN3_5end |
Coexpression cluster: | C4035_epididymis_uterus_skeletal_trachea_throat_neuroblastoma_diaphragm |
Association with transcript: | 2bp_to_NM_052846, uc002xjy.1_5end |
EntrezGene: | EMILIN3 |
HGNC: | 16123 |
UniProt: | Q9NT22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.58e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
sense organ | 1.12e-07 | 24 |
sensory system | 1.12e-07 | 24 |
entire sense organ system | 1.12e-07 | 24 |
retina | 6.09e-07 | 6 |
photoreceptor array | 6.09e-07 | 6 |
posterior segment of eyeball | 6.09e-07 | 6 |