FFCP PHASE1:Hg19::chr12:109273910..109273921,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1610 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2671 | |||
|TSSclassifier=strong | |||
|UniProt=F8VVT2 | |||
|association_with_transcript=0bp_to_ENST00000549215_5end | |||
|cluster_id=chr12:109273910..109273921,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_DAO_5end | |||
|id=chr12:109273910..109273921,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.02e-14!12;CL:0000417!1.02e-14!12;CL:0000668!1.02e-14!12;CL:0000414!1.02e-14!12;CL:0000412!1.02e-14!12;CL:0000182!1.02e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.16e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.40e-07;3!UBERON:0003057;2.40e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!6.40e-46!15;UBERON:0003057!6.40e-46!15;UBERON:0002298!9.76e-43!8;UBERON:0004733!5.84e-37!12;UBERON:0002028!5.84e-37!12;UBERON:0007277!5.84e-37!12;UBERON:0004732!4.85e-34!13;UBERON:0001896!2.26e-22!3;UBERON:0005290!2.26e-22!3;UBERON:0010096!2.26e-22!3;UBERON:0000988!7.18e-22!3;UBERON:0006331!1.03e-21!3;UBERON:0001049!2.76e-21!57;UBERON:0005068!2.76e-21!57;UBERON:0006241!2.76e-21!57;UBERON:0007135!2.76e-21!57;UBERON:0002680!1.35e-19!9;UBERON:0001895!1.35e-19!9;UBERON:0010092!1.35e-19!9;UBERON:0007023!1.03e-18!115;UBERON:0001017!3.99e-16!82;UBERON:0005743!2.91e-15!86;UBERON:0002148!3.22e-15!2;UBERON:0009662!3.22e-15!2;UBERON:0002616!8.57e-15!59;UBERON:0000955!1.99e-14!69;UBERON:0006238!1.99e-14!69;UBERON:0000025!1.37e-13!194;UBERON:0000073!1.39e-13!94;UBERON:0001016!1.39e-13!94;UBERON:0003075!2.57e-13!86;UBERON:0007284!2.57e-13!86;UBERON:0002107!3.87e-13!19;UBERON:0006925!3.87e-13!19;UBERON:0008836!3.87e-13!19;UBERON:0002346!1.29e-12!90;UBERON:0008835!2.80e-11!22;UBERON:0003894!2.80e-11!22;UBERON:0009854!9.12e-11!23;UBERON:0002240!1.34e-10!3;UBERON:0004111!3.77e-10!241;UBERON:0007499!7.29e-10!25;UBERON:0009497!7.29e-10!25;UBERON:0000015!7.29e-10!25;UBERON:0002423!7.29e-10!25;UBERON:0006235!7.29e-10!25;UBERON:0004161!7.29e-10!25;UBERON:0005057!1.83e-09!26;UBERON:0009856!1.83e-09!26;UBERON:0005172!3.58e-09!55;UBERON:0005173!3.58e-09!55;UBERON:0002079!1.84e-08!1;UBERON:0002336!2.64e-08!1;UBERON:0001018!2.64e-08!1;UBERON:0002473!2.64e-08!1;UBERON:0005340!2.64e-08!1;UBERON:0002316!2.64e-08!1;UBERON:0003544!2.64e-08!1;UBERON:0001020!2.64e-08!1;UBERON:0005970!2.64e-08!1;UBERON:0002437!2.64e-08!1;UBERON:0001301!2.84e-08!1;UBERON:0002038!3.06e-08!1;UBERON:0009661!3.06e-08!1;UBERON:0002902!3.28e-08!1;UBERON:0009899!3.28e-08!1;UBERON:0002417!3.91e-08!61;UBERON:0000916!3.91e-08!61;UBERON:0000477!6.56e-08!286;UBERON:0002365!7.46e-08!31;UBERON:0002330!7.46e-08!31;UBERON:0002308!1.36e-07!9;UBERON:0000125!1.36e-07!9;UBERON:0000033!3.56e-07!123;UBERON:0000483!5.15e-07!309;UBERON:0000119!6.59e-07!312;UBERON:0002368!6.78e-07!35;UBERON:0000475!7.23e-07!365;UBERON:0000153!9.67e-07!129;UBERON:0007811!9.67e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.77e-27;6!UBERON:0001896;1.14e-24;3!UBERON:0005290;1.14e-24;3!UBERON:0004733;5.17e-14;12!UBERON:0002028;5.17e-14;12!UBERON:0004732;5.49e-13;13!UBERON:0002148;2.99e-10;2!UBERON:0006331;2.99e-10;2!UBERON:0009662;2.99e-10;2!UBERON:0002107;3.38e-09;19!UBERON:0006925;3.38e-09;19!UBERON:0002240;2.40e-07;3!UBERON:0005174;2.40e-07;3!UBERON:0001137;2.40e-07;3!UBERON:0000988;2.97e-07;3!UBERON:0002423;4.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.32e-27,6;UBERON:0001896,1.01e-24,3;UBERON:0005290,1.01e-24,3;UBERON:0010096,1.01e-24,3;UBERON:0003076,1.94e-19,15;UBERON:0003057,1.94e-19,15;UBERON:0004733,4.72e-14,12;UBERON:0002028,4.72e-14,12;UBERON:0007277,4.72e-14,12;UBERON:0004732,5.05e-13,13;UBERON:0002148,2.72e-10,2;UBERON:0006331,2.72e-10,2;UBERON:0009662,2.72e-10,2;UBERON:0002107,3.52e-09,19;UBERON:0006925,3.52e-09,19;UBERON:0008836,3.52e-09,19;UBERON:0008835,5.26e-08,22;UBERON:0003894,5.26e-08,22;UBERON:0009854,1.11e-07,23;UBERON:0002240,2.47e-07,3;UBERON:0005174,2.47e-07,3;UBERON:0001137,2.47e-07,3;UBERON:0000988,2.79e-07,3;UBERON:0007499,4.14e-07,25;UBERON:0009497,4.14e-07,25;UBERON:0000015,4.14e-07,25;UBERON:0002423,4.14e-07,25;UBERON:0006235,4.14e-07,25;UBERON:0004161,4.14e-07,25;UBERON:0009856,7.41e-07,26 | |||
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|short_description=p2@DAO | |||
}} |
Latest revision as of 05:56, 16 September 2015
Short description: | p2@DAO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DAO_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000549215_5end |
EntrezGene: | DAO |
HGNC: | 2671 |
UniProt: | F8VVT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
brainstem | 2.32e-27 | 6 |
medulla oblongata | 1.01e-24 | 3 |
myelencephalon | 1.01e-24 | 3 |
future myelencephalon | 1.01e-24 | 3 |
posterior neural tube | 1.94e-19 | 15 |
chordal neural plate | 1.94e-19 | 15 |
segmental subdivision of hindbrain | 4.72e-14 | 12 |
hindbrain | 4.72e-14 | 12 |
presumptive hindbrain | 4.72e-14 | 12 |
segmental subdivision of nervous system | 5.05e-13 | 13 |
locus ceruleus | 2.72e-10 | 2 |
brainstem nucleus | 2.72e-10 | 2 |
hindbrain nucleus | 2.72e-10 | 2 |
liver | 3.52e-09 | 19 |
digestive gland | 3.52e-09 | 19 |
liver bud | 3.52e-09 | 19 |
hepatic diverticulum | 5.26e-08 | 22 |
liver primordium | 5.26e-08 | 22 |
digestive tract diverticulum | 1.11e-07 | 23 |
spinal cord | 2.47e-07 | 3 |
dorsal region element | 2.47e-07 | 3 |
dorsum | 2.47e-07 | 3 |
pons | 2.79e-07 | 3 |
epithelial sac | 4.14e-07 | 25 |
epithelium of foregut-midgut junction | 4.14e-07 | 25 |
anatomical boundary | 4.14e-07 | 25 |
hepatobiliary system | 4.14e-07 | 25 |
foregut-midgut junction | 4.14e-07 | 25 |
septum transversum | 4.14e-07 | 25 |
sac | 7.41e-07 | 26 |