FFCP PHASE1:Hg19::chr1:229569834..229569849,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=129 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T8M8,Q5T8M7,A6NL76,P68133 | |||
|association_with_transcript=0bp_to_ENST00000308794,ENST00000366682,ENST00000366683,ENST00000366684,NM_001100,uc001htm.2_5end | |||
|cluster_id=chr1:229569834..229569849,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_ACTA1_5end | |||
|id=chr1:229569834..229569849,- | |||
|ontology_enrichment_celltype=CL:0000188!3.57e-08!9;CL:0002322!5.65e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.40e-11;9!CL:0002322;2.99e-09;5!CL:0000680;9.37e-08;7!CL:0002321;1.20e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.63e-11,9;CL:0002322,2.99e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006603;8.13e-11;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.63e-24!115;UBERON:0000481!3.52e-09!347;UBERON:0000922!7.83e-09!612;UBERON:0000468!1.64e-08!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.95e-22;16!UBERON:0002036;8.95e-22;16!UBERON:0000922;1.82e-10;49!UBERON:0002385;2.18e-10;31!UBERON:0001015;2.18e-10;31!UBERON:0000383;2.18e-10;31!UBERON:0003135;5.12e-09;11!UBERON:0007023;6.38e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-20,114;UBERON:0003135,4.87e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0,0,1.05506791291381,0,0,0,0,0,0,0.246242116153576,0,7.8363680369522,0.572471974262113,0.136874425072884,6.90484517771415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,88.9937268871052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.263504357079378,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37725187756732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,453.010344565317,127.361107356947,180.216805390623,265.890606114425,198.57650963912,1.45990943630332,0,0,0,0,0,0,0,0,0.441175890929576,0,0,0,0,0,0,0,0.4115740113314,122.01723045,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0.297262324577456,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7845417335022,4.52047909610843,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50085260529839,0,0,0,0,0,0,0,0,0,0.368738337083406,0,4.69922777910577,510.254271206743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.728364672026868,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0.824328093181778,0,0,0,0,0,69.4095757337436,17.2534451168402,79.8219108575874,66.2993913650592,1.18162269355101,28.1332386193603,149.743184370089,567.134067069717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0,0,0,5.36397112998549,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1498.33914941366,0,0,0,0,0,0,0,0,0,0,0,61.1691323930784,1.65770349318689,5.03865495708552,0,0,0,0,0,0,14.2046504117184,0,0,0.969332746095218,0,1.99613798001194,0,0,2.89999830173917,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,1.09692698576986,0,0,0.230850775511391,0,0,9.87334088507493,1.52106320690811,0.638002319463839,12.2740775158495,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,1.07841812769083,41190.6925923157,0,0,0,0,57.2147384131616,2.41981432097328,0.30607276163049,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,2506.10460259544,0,0.0967563312890851,0,0,1467.24984143681,0,740.312906797024,0,0,3.60871536948509,0.391102765469606,0,1.28071796843612,0,0,0,0,0,0,0.942776138467182,0,0,0,0.866851769704557,0,0,0,0,0,1419.03388086432,5593.34762927717,707.104929208162,5358.58565739093,5002.2003649836,6620.82762792803,1119.41101857383,0,0,10.9508623407041,9.97231886412114,9.77351385885681,0.196854963029498,0,0,0,18.6473652219422,8.66498450562573,8.3088067605837,0,0,1.33649024647654,0,0.630445658393585,1.15400093896996,0,0,0,945.541916791965,1637.35344271371,0,0,7.77799342081141,0,0,0,0,0.453248366080503,0,2.65013777824443,0,0,0,0,0.213574825135389,2.35806457649499,2.07119527673598,0,0,0,0,0,12.534494701135,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.807253238237985,0,0,0,0,0,0,0,0,0,0,3.78806010550178,24.6536543717524,30.2535815342822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04739592914604,0,0,4.95889154733902,0,0,0,0,0,0,0,0,0,0,1.38172136692479,0,0,0,0.531459361253452,0,2.6208787907713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0,1.93770774758221,14.2769420259154,0,0,0,0,0,0,1.39241355481392,0.0752103283492573,0,3.12605604493237,0,0,0,4.59255575405084,0,0,0.443910671357348,0,639.816813922332,24132.7344497849,0,0,0,0.336283722218824,0,0,2.30626162422861,0,0,0.203909198930495,27.6903376699595,0,0,21.8210798124429,0,0,9.13158720509496,0,0,0.214429632529969,0,0,0,0,0,0.85359238546975,0.691259661814092,457.331682425955,0,0,2.9637093513365,2.06196181689645,0,0,3.57937381752935,0,0,30400.6684789948,75303.0661662503,30591.2654409763,3780.28865897928,0,0,0,0,0,0.301925687133347,0.0771741581079447,5.68254857310289,0,4.90296643507811,0,0,0,195.266946143531,0,0,0.45120521581504,0,0,0.705789743431384,0,2.19100916473955,2416.12713569172,0,0.157771562193185,0.543931921527318,0,4.2322147241232,0.743990036333503,0,3.8936390591141,1.38783067318587,0.327796715891087,0,33.1463696661441,20.8429576107137,0,0,21.6727076904165,9.11078042531007,0,0,32479.3736551936,5542.85415777027,2.58355639344024,17.6912935743195,0,249.942390558354,1721.2299811682,25141.9300471411,33181.9141733256,1890.50477606646,586.974528933663,2488.29946696418,0,0,0,0,2752.33825439252,2.81155321620593,5.69654649642034,0,1689.29094960948,0 | |||
|short_description=p1@ACTA1 | |||
}} |
Latest revision as of 05:49, 16 September 2015
Short description: | p1@ACTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTA1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000308794, ENST00000366682, ENST00000366683, ENST00000366684, NM_001100, uc001htm.2_5end |
EntrezGene: | ACTA1 |
HGNC: | 129 |
UniProt: | Q5T8M8Q5T8M7A6NL76P68133 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.63e-11 | 9 |
embryonic stem cell | 2.99e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.05e-20 | 114 |
male reproductive organ | 4.87e-09 | 11 |