FFCP PHASE1:Hg19::chr11:120207928..120207962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23365 | |EntrezGene=23365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14193 | |HGNC=14193 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZN5 | |UniProt=Q9NZN5 | ||
|association_with_transcript=0bp_to_ENST00000356641,uc001pxl.1,uc009zat.2_5end | |association_with_transcript=0bp_to_ENST00000356641,uc001pxl.1,uc009zat.2_5end | ||
|cluster_id=chr11:120207928..120207962,+ | |||
|coexpression_cluster_id=C3099 | |||
|description=CAGE_peak_8_at_ARHGEF12_5end | |description=CAGE_peak_8_at_ARHGEF12_5end | ||
|id=chr11:120207928..120207962,+ | |id=chr11:120207928..120207962,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;6.91e-07;2!CL:0000558;6.91e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.97e-07,2;CL:0000765,6.97e-07,2;CL:0000050,6.97e-07,2;CL:0000038,6.97e-07,2;CL:0000558,6.97e-07,2;CL:0000547,6.97e-07,2;CL:0000549,6.97e-07,2;CL:0000550,6.97e-07,2;CL:0000552,6.97e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.79e-08;3!DOID:127;4.79e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.42e-08,3;DOID:127,6.42e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.89e-17!115;UBERON:0000468!4.74e-09!659;UBERON:0000477!5.29e-08!286;UBERON:0002616!1.88e-07!59;UBERON:0001049!5.79e-07!57;UBERON:0005068!5.79e-07!57;UBERON:0006241!5.79e-07!57;UBERON:0007135!5.79e-07!57;UBERON:0000480!5.93e-07!626;UBERON:0000467!7.99e-07!625;UBERON:0002020!9.59e-07!34;UBERON:0003528!9.59e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.61e-12,114 | |||
|phase1_expression=0,1.07050261945492,0.140954404095971,2.00146596706261,1.34088328328186,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.74259811776028,1.32558950291166,2.01697543935533,0,0,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.534893840235659,0.246301768349837,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,1.73815822752988,0.795285947051099,0.486634870302636,0.189069634328136,1.10864698731282,0.43917392846563,1.30979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0.825354125820202,0.835979866147242,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,0,0.709336764396714,0.560677600142307,0,0,0,0.538842688278752,0.163461903113459,0.605429710579726,1.15235184896,0,0.312160076830321,0,0.597794722207204,0.469737994575059,0.161872944368132,0,0.204154171254893,0.491337269247072,0.309977343527296,2.37600571456411,0.989067717114227,0,0,0.505008341862199,0.625592599359821,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0.717558542755448,0.640672166455702,0.423863802319124,0,0.412210116953756,0.257640540045629,0.558350568994769,0.843881661206331,0.292311015483596,0.504867548488229,0.184099797284599,0.484938170456436,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0.709840800239063,0.168584690078102,0.482022059766964,0.992645754591546,0.217879444092406,0.949082476444386,0.808987848960987,0.784885860501384,0,0.738155454624648,0,0,0,17.7457048750563,13.7595810334868,8.27105869353966,0,0.368965315629341,0.171567810298526,0.219500570817251,0,0.301586917234893,0.277765335475589,0,0,0,0.231860809950154,0,0.577465791044295,0,0.761016608938393,0,0,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.179117045405697,0,0,0.492663237895943,0.088048434013226,0.829312462163088,0.288239906833923,0.6312121671319,0.063497894292169,0,0,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.299918973546171,1.2162378064119,0,0,0.718874566474748,0,0,0.579125226670317,1.02738161275192,0.179060963239896,0,0,0.215627574859517,0.128343036279748,2.7950408664471,0,0.773288812777695,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0.831883446123229,2.49800584316026,0.315404830067869,0,0,0,0,0,0.184369168541703,0.60818530127658,0.195801157462741,0,0,0.647142602455851,0,0,1.66435439510497,0,0,0.767309866440312,1.40330047216537,0.384417447767103,0.511707249066704,0.160853921143607,0,0.462629081407967,0.177561725313127,0.164254312027618,0,0.581051892299796,0.120859449591622,0.200506470303285,0.276242966807689,0.34444334449382,0.182091168006717,1.04899531967539,0,0.308061348417659,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,15.3481913652154,12.0260307471454,0,0,0,3.60643540767028,0.183138929636687,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.255679882248303,0.356128142586949,0.330569830721956,1.15314040419064,0.382838137483752,0,0.464845549297286,0.62962469366128,0,0.308033580176089,1.06461206063404,0,0.37064843820784,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,1.21856744815642,0,0.272999822815972,0.707027159768564,0,0,0,1.31535265576129,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,3.48332062874083,0,0,0.886860307073351,0.459446800413919,1.52234282769651,0.764637207142375,2.27858874869665,0.476463550915578,1.64544909234478,5.18778648954174,6.48037724685738,2.37937552888281,0.534120355637366,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0.307160702099232,3.97659059106519,0.844016498463076,0.111308705022906,0.16480387422676,0,0.796991953004279,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.358042349351218,0,0.295930216910801,0,0,0,0.278304294485554,0,0.520855522170466,0.262379999988587,0.724999575434793,0.227586896570999,0,0.236387681767936,0,0.583209226766509,0.17362499493329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| ||
|short_description=p8@ARHGEF12 | |short_description=p8@ARHGEF12 | ||
}} | }} |
Latest revision as of 05:26, 16 September 2015
Short description: | p8@ARHGEF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGEF12_5end |
Coexpression cluster: | C3099_Reticulocytes_Hepatocyte_choriocarcinoma_liver_pancreatic_Whole_blood |
Association with transcript: | 0bp_to_ENST00000356641, uc001pxl.1, uc009zat.2_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | Q9NZN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.97e-07 | 2 |
erythroblast | 6.97e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 6.97e-07 | 2 |
erythroid progenitor cell | 6.97e-07 | 2 |
reticulocyte | 6.97e-07 | 2 |
proerythroblast | 6.97e-07 | 2 |
basophilic erythroblast | 6.97e-07 | 2 |
polychromatophilic erythroblast | 6.97e-07 | 2 |
orthochromatic erythroblast | 6.97e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.61e-12 | 114 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.42e-08 | 3 |
leiomyoma | 6.42e-08 | 3 |