FFCP PHASE1:Hg19::chr10:105881779..105881814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119392 | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29574 | |HGNC=29574 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XK3 | |UniProt=Q86XK3 | ||
|association_with_transcript=-1bp_to_ENST00000369729,ENST00000463224,NM_145247,uc001kxs.2,uc001kxt.2_5end | |association_with_transcript=-1bp_to_ENST00000369729,ENST00000463224,NM_145247,uc001kxs.2,uc001kxt.2_5end | ||
|cluster_id=chr10:105881779..105881814,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_SFR1_5end | |description=CAGE_peak_3_at_SFR1_5end | ||
|id=chr10:105881779..105881814,+ | |id=chr10:105881779..105881814,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.25e-20!42;CL:0000860!6.65e-17!45;CL:0002194!4.74e-10!63;CL:0000576!4.74e-10!63;CL:0000040!4.74e-10!63;CL:0000559!4.74e-10!63;CL:0002009!1.72e-09!65;CL:0000839!1.18e-08!70;CL:0000766!1.56e-08!76;CL:0000557!9.65e-08!71 | |ontology_enrichment_celltype=CL:0002057!8.25e-20!42;CL:0000860!6.65e-17!45;CL:0002194!4.74e-10!63;CL:0000576!4.74e-10!63;CL:0000040!4.74e-10!63;CL:0000559!4.74e-10!63;CL:0002009!1.72e-09!65;CL:0000839!1.18e-08!70;CL:0000766!1.56e-08!76;CL:0000557!9.65e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-18;33!CL:0002057;5.96e-18;33!CL:0000473;7.85e-12;39!CL:0000234;7.85e-12;39!CL:0000576;1.55e-10;48!CL:0000766;7.46e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-21,42;CL:0002057,4.17e-21,42;CL:0000473,4.36e-17,48;CL:0000234,4.36e-17,48;CL:0002194,3.10e-11,59;CL:0000576,3.10e-11,59;CL:0000040,3.10e-11,59;CL:0000559,3.10e-11,59;CL:0002009,8.20e-11,61;CL:0000766,2.14e-09,72;CL:0000839,3.83e-09,66;CL:0000557,1.61e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.93e-20!659;UBERON:0005743!1.02e-18!86;UBERON:0001017!1.07e-18!82;UBERON:0001049!1.74e-18!57;UBERON:0005068!1.74e-18!57;UBERON:0006241!1.74e-18!57;UBERON:0007135!1.74e-18!57;UBERON:0002616!5.55e-18!59;UBERON:0000955!3.15e-17!69;UBERON:0006238!3.15e-17!69;UBERON:0000073!6.52e-17!94;UBERON:0001016!6.52e-17!94;UBERON:0000467!7.13e-17!625;UBERON:0000480!1.72e-16!626;UBERON:0002050!1.18e-15!605;UBERON:0005423!1.18e-15!605;UBERON:0000923!1.37e-15!604;UBERON:0005291!1.37e-15!604;UBERON:0006598!1.37e-15!604;UBERON:0002532!1.37e-15!604;UBERON:0000922!1.90e-15!612;UBERON:0003075!3.52e-15!86;UBERON:0007284!3.52e-15!86;UBERON:0002346!4.46e-14!90;UBERON:0000033!6.02e-14!123;UBERON:0000153!3.63e-13!129;UBERON:0007811!3.63e-13!129;UBERON:0003080!1.34e-12!42;UBERON:0000062!1.35e-12!511;UBERON:0002780!3.39e-12!41;UBERON:0001890!3.39e-12!41;UBERON:0006240!3.39e-12!41;UBERON:0004121!6.43e-12!169;UBERON:0000924!2.36e-11!173;UBERON:0006601!2.36e-11!173;UBERON:0002020!3.59e-11!34;UBERON:0003528!3.59e-11!34;UBERON:0001893!4.85e-11!34;UBERON:0003056!5.76e-11!61;UBERON:0002791!1.09e-10!33;UBERON:0001869!5.73e-10!32;UBERON:0007023!1.25e-09!115;UBERON:0000475!1.06e-08!365;UBERON:0004765!2.26e-08!101;UBERON:0001434!2.26e-08!101;UBERON:0002204!3.29e-08!167;UBERON:0002371!1.81e-07!80;UBERON:0000479!1.93e-07!787;UBERON:0003076!2.57e-07!15;UBERON:0003057!2.57e-07!15;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0001474!4.74e-07!86;UBERON:0004732!8.09e-07!13 | |ontology_enrichment_uberon=UBERON:0000468!6.93e-20!659;UBERON:0005743!1.02e-18!86;UBERON:0001017!1.07e-18!82;UBERON:0001049!1.74e-18!57;UBERON:0005068!1.74e-18!57;UBERON:0006241!1.74e-18!57;UBERON:0007135!1.74e-18!57;UBERON:0002616!5.55e-18!59;UBERON:0000955!3.15e-17!69;UBERON:0006238!3.15e-17!69;UBERON:0000073!6.52e-17!94;UBERON:0001016!6.52e-17!94;UBERON:0000467!7.13e-17!625;UBERON:0000480!1.72e-16!626;UBERON:0002050!1.18e-15!605;UBERON:0005423!1.18e-15!605;UBERON:0000923!1.37e-15!604;UBERON:0005291!1.37e-15!604;UBERON:0006598!1.37e-15!604;UBERON:0002532!1.37e-15!604;UBERON:0000922!1.90e-15!612;UBERON:0003075!3.52e-15!86;UBERON:0007284!3.52e-15!86;UBERON:0002346!4.46e-14!90;UBERON:0000033!6.02e-14!123;UBERON:0000153!3.63e-13!129;UBERON:0007811!3.63e-13!129;UBERON:0003080!1.34e-12!42;UBERON:0000062!1.35e-12!511;UBERON:0002780!3.39e-12!41;UBERON:0001890!3.39e-12!41;UBERON:0006240!3.39e-12!41;UBERON:0004121!6.43e-12!169;UBERON:0000924!2.36e-11!173;UBERON:0006601!2.36e-11!173;UBERON:0002020!3.59e-11!34;UBERON:0003528!3.59e-11!34;UBERON:0001893!4.85e-11!34;UBERON:0003056!5.76e-11!61;UBERON:0002791!1.09e-10!33;UBERON:0001869!5.73e-10!32;UBERON:0007023!1.25e-09!115;UBERON:0000475!1.06e-08!365;UBERON:0004765!2.26e-08!101;UBERON:0001434!2.26e-08!101;UBERON:0002204!3.29e-08!167;UBERON:0002371!1.81e-07!80;UBERON:0000479!1.93e-07!787;UBERON:0003076!2.57e-07!15;UBERON:0003057!2.57e-07!15;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0001474!4.74e-07!86;UBERON:0004732!8.09e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.87e-11;53!UBERON:0002616;1.87e-11;53!UBERON:0003528;3.32e-10;34!UBERON:0002020;3.32e-10;34!UBERON:0001893;9.72e-10;34!UBERON:0002791;1.90e-09;32!UBERON:0001869;2.05e-09;32!UBERON:0002780;2.75e-09;41!UBERON:0001890;2.75e-09;41!UBERON:0001017;1.53e-08;75!UBERON:0000955;3.23e-08;68!UBERON:0000956;9.90e-08;25!UBERON:0000203;9.90e-08;25!UBERON:0004732;2.16e-07;13!UBERON:0004733;4.88e-07;12!UBERON:0002028;4.88e-07;12 | |||
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| ||
|short_description=p3@SFR1 | |short_description=p3@SFR1 | ||
}} | }} |
Latest revision as of 05:22, 16 September 2015
Short description: | p3@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -1bp_to_ENST00000369729, ENST00000463224, NM_145247, uc001kxs.2, uc001kxt.2_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | Q86XK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.17e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.17e-21 | 42 |
defensive cell | 4.36e-17 | 48 |
phagocyte | 4.36e-17 | 48 |
monopoietic cell | 3.10e-11 | 59 |
monocyte | 3.10e-11 | 59 |
monoblast | 3.10e-11 | 59 |
promonocyte | 3.10e-11 | 59 |
macrophage dendritic cell progenitor | 8.20e-11 | 61 |
myeloid leukocyte | 2.14e-09 | 72 |
myeloid lineage restricted progenitor cell | 3.83e-09 | 66 |
granulocyte monocyte progenitor cell | 1.61e-08 | 67 |