FFCP PHASE1:Hg19::chr12:108991812..108991869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338773 | |EntrezGene=338773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27884 | |HGNC=27884 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFT9 | |UniProt=E9PFT9 | ||
|association_with_transcript=0bp_to_ENST00000433191_5end | |association_with_transcript=0bp_to_ENST00000433191_5end | ||
|cluster_id=chr12:108991812..108991869,- | |||
|coexpression_cluster_id=C2182 | |coexpression_cluster_id=C2182 | ||
|description=CAGE_peak_1_at_TMEM119_5end | |description=CAGE_peak_1_at_TMEM119_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.30e-31!180;CL:0000057!5.20e-25!75;CL:0002620!7.33e-13!23;CL:0000183!3.35e-10!59;CL:0000680!4.31e-10!57;CL:0000056!4.31e-10!57;CL:0000355!4.31e-10!57;CL:0000187!7.73e-10!54;CL:0002334!7.99e-09!12;CL:0000136!1.70e-08!15;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.30e-31!180;CL:0000057!5.20e-25!75;CL:0002620!7.33e-13!23;CL:0000183!3.35e-10!59;CL:0000680!4.31e-10!57;CL:0000056!4.31e-10!57;CL:0000355!4.31e-10!57;CL:0000187!7.73e-10!54;CL:0002334!7.99e-09!12;CL:0000136!1.70e-08!15;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.63e-13;23!CL:0000057;2.51e-10;73!CL:0002334;2.22e-09;12!CL:0002320;1.99e-07;188!CL:0000136;6.09e-07;13!CL:0002570;7.82e-07;8 | |ontology_enrichment_celltype_v019=CL:0002620;4.63e-13;23!CL:0000057;2.51e-10;73!CL:0002334;2.22e-09;12!CL:0002320;1.99e-07;188!CL:0000136;6.09e-07;13!CL:0002570;7.82e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-25,76;CL:0002620,4.60e-13,23;CL:0000680,1.92e-09,58;CL:0000056,1.92e-09,58;CL:0000355,1.92e-09,58;CL:0002334,2.21e-09,12;CL:0000187,3.73e-09,55;CL:0000136,2.32e-08,15;CL:0000393,2.62e-07,61;CL:0000211,2.62e-07,61;CL:0002570,7.78e-07,8;CL:0000048,7.93e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-20!365;UBERON:0000914!2.02e-19!83;UBERON:0002329!2.02e-19!83;UBERON:0003077!2.02e-19!83;UBERON:0003059!2.02e-19!83;UBERON:0007282!2.02e-19!83;UBERON:0009618!2.02e-19!83;UBERON:0007285!2.02e-19!83;UBERON:0004290!2.77e-15!70;UBERON:0003102!6.74e-14!95;UBERON:0002199!2.59e-12!45;UBERON:0002416!2.59e-12!45;UBERON:0000486!1.41e-11!82;UBERON:0002385!3.06e-11!63;UBERON:0001015!3.06e-11!63;UBERON:0000383!3.06e-11!63;UBERON:0000468!3.93e-11!659;UBERON:0001134!8.60e-11!61;UBERON:0002036!8.60e-11!61;UBERON:0003082!8.60e-11!61;UBERON:0000481!1.03e-10!347;UBERON:0000479!1.18e-10!787;UBERON:0001013!4.60e-10!14;UBERON:0007023!5.68e-10!115;UBERON:0002097!1.21e-09!40;UBERON:0005256!1.09e-08!143;UBERON:0000033!2.29e-08!123;UBERON:0000153!2.35e-08!129;UBERON:0007811!2.35e-08!129;UBERON:0002100!3.45e-07!216;UBERON:0002067!4.78e-07!9;UBERON:0004016!4.78e-07!9;UBERON:0010083!4.78e-07!9;UBERON:0000467!4.79e-07!625;UBERON:0002616!5.94e-07!59;UBERON:0000480!6.59e-07!626;UBERON:0004121!7.34e-07!169 | |ontology_enrichment_uberon=UBERON:0000475!2.71e-20!365;UBERON:0000914!2.02e-19!83;UBERON:0002329!2.02e-19!83;UBERON:0003077!2.02e-19!83;UBERON:0003059!2.02e-19!83;UBERON:0007282!2.02e-19!83;UBERON:0009618!2.02e-19!83;UBERON:0007285!2.02e-19!83;UBERON:0004290!2.77e-15!70;UBERON:0003102!6.74e-14!95;UBERON:0002199!2.59e-12!45;UBERON:0002416!2.59e-12!45;UBERON:0000486!1.41e-11!82;UBERON:0002385!3.06e-11!63;UBERON:0001015!3.06e-11!63;UBERON:0000383!3.06e-11!63;UBERON:0000468!3.93e-11!659;UBERON:0001134!8.60e-11!61;UBERON:0002036!8.60e-11!61;UBERON:0003082!8.60e-11!61;UBERON:0000481!1.03e-10!347;UBERON:0000479!1.18e-10!787;UBERON:0001013!4.60e-10!14;UBERON:0007023!5.68e-10!115;UBERON:0002097!1.21e-09!40;UBERON:0005256!1.09e-08!143;UBERON:0000033!2.29e-08!123;UBERON:0000153!2.35e-08!129;UBERON:0007811!2.35e-08!129;UBERON:0002100!3.45e-07!216;UBERON:0002067!4.78e-07!9;UBERON:0004016!4.78e-07!9;UBERON:0010083!4.78e-07!9;UBERON:0000467!4.79e-07!625;UBERON:0002616!5.94e-07!59;UBERON:0000480!6.59e-07!626;UBERON:0004121!7.34e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.06e-10;14!UBERON:0002385;9.01e-09;31!UBERON:0001015;9.01e-09;31!UBERON:0000383;9.01e-09;31!UBERON:0002199;1.32e-08;46!UBERON:0002416;1.32e-08;46!UBERON:0002384;1.55e-08;198!UBERON:0002204;1.98e-08;70!UBERON:0003102;3.18e-08;50!UBERON:0002097;4.78e-08;41!UBERON:0002067;1.81e-07;9!UBERON:0001434;6.05e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0001013;1.06e-10;14!UBERON:0002385;9.01e-09;31!UBERON:0001015;9.01e-09;31!UBERON:0000383;9.01e-09;31!UBERON:0002199;1.32e-08;46!UBERON:0002416;1.32e-08;46!UBERON:0002384;1.55e-08;198!UBERON:0002204;1.98e-08;70!UBERON:0003102;3.18e-08;50!UBERON:0002097;4.78e-08;41!UBERON:0002067;1.81e-07;9!UBERON:0001434;6.05e-07;36 | ||
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| ||
|short_description=p1@TMEM119 | |short_description=p1@TMEM119 | ||
}} | }} |
Latest revision as of 05:07, 16 September 2015
Short description: | p1@TMEM119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM119_5end |
Coexpression cluster: | C2182_Mesenchymal_Adipocyte_Hair_Preadipocyte_osteosarcoma_Saos2_normal |
Association with transcript: | 0bp_to_ENST00000433191_5end |
EntrezGene: | TMEM119 |
HGNC: | 27884 |
UniProt: | E9PFT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.45e-25 | 76 |
skin fibroblast | 4.60e-13 | 23 |
muscle precursor cell | 1.92e-09 | 58 |
myoblast | 1.92e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-09 | 58 |
preadipocyte | 2.21e-09 | 12 |
muscle cell | 3.73e-09 | 55 |
fat cell | 2.32e-08 | 15 |
electrically responsive cell | 2.62e-07 | 61 |
electrically active cell | 2.62e-07 | 61 |
mesenchymal stem cell of adipose | 7.78e-07 | 8 |
multi fate stem cell | 7.93e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.48e-15 | 73 |
paraxial mesoderm | 6.08e-15 | 72 |
presumptive paraxial mesoderm | 6.08e-15 | 72 |
surface structure | 6.56e-15 | 99 |
somite | 8.40e-15 | 71 |
presomitic mesoderm | 8.40e-15 | 71 |
presumptive segmental plate | 8.40e-15 | 71 |
dermomyotome | 8.40e-15 | 71 |
trunk paraxial mesoderm | 8.40e-15 | 71 |
integument | 1.98e-13 | 46 |
integumental system | 1.98e-13 | 46 |
epithelial vesicle | 1.74e-12 | 78 |
tissue | 2.16e-11 | 773 |
multilaminar epithelium | 2.59e-11 | 83 |
adipose tissue | 1.02e-10 | 14 |
muscle tissue | 1.19e-10 | 64 |
musculature | 1.19e-10 | 64 |
musculature of body | 1.19e-10 | 64 |
skin of body | 1.50e-10 | 41 |
skeletal muscle tissue | 3.50e-10 | 62 |
striated muscle tissue | 3.50e-10 | 62 |
myotome | 3.50e-10 | 62 |
structure with developmental contribution from neural crest | 5.82e-10 | 132 |
adult organism | 2.41e-08 | 114 |
trunk mesenchyme | 1.34e-07 | 122 |
dermis | 1.80e-07 | 9 |
dermatome | 1.80e-07 | 9 |
future dermis | 1.80e-07 | 9 |
mesenchyme | 3.01e-07 | 160 |
entire embryonic mesenchyme | 3.01e-07 | 160 |
cavity lining | 6.85e-07 | 12 |
serous membrane | 6.85e-07 | 12 |