FFCP PHASE1:Hg19::chr8:12809591..12809598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=440bp_to_ENST00000528753_5end | |association_with_transcript=440bp_to_ENST00000528753_5end | ||
|cluster_id=chr8:12809591..12809598,+ | |||
|coexpression_cluster_id=C2916 | |coexpression_cluster_id=C2916 | ||
|description=CAGE_peak_13_at_KIAA1456_5end | |description=CAGE_peak_13_at_KIAA1456_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.43e-60;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.43e-60;3 | ||
|ontology_enrichment_disease=DOID:171!3.93e-10!10 | |ontology_enrichment_disease=DOID:171!3.93e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.47e-18;10!DOID:3095;1.08e-08;22!DOID:2994;1.08e-08;22 | |ontology_enrichment_disease_v019=DOID:171;2.47e-18;10!DOID:3095;1.08e-08;22!DOID:2994;1.08e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.47e-18,10;DOID:3095,1.08e-08,22;DOID:2994,1.08e-08,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;1.39e-44;4!UBERON:0000923;1.39e-44;4!UBERON:0010316;1.39e-44;4!UBERON:0005291;1.39e-44;4!UBERON:0001905;7.33e-41;2!UBERON:0002757;7.33e-41;2!UBERON:0010134;7.33e-41;2!UBERON:0005408;7.33e-41;2!UBERON:0001899;7.33e-41;2!UBERON:0002050;7.52e-36;5!UBERON:0005423;7.52e-36;5!UBERON:0002037;1.25e-30;6!UBERON:0003296;5.17e-21;4!UBERON:0010133;5.17e-21;4!UBERON:0002784;5.17e-21;4!UBERON:0002680;1.09e-20;9!UBERON:0001895;1.09e-20;9!UBERON:0004733;1.06e-15;12!UBERON:0002028;1.06e-15;12!UBERON:0004732;1.51e-14;13!UBERON:0001894;1.89e-12;7 | |ontology_enrichment_uberon_v019=UBERON:0002346;1.39e-44;4!UBERON:0000923;1.39e-44;4!UBERON:0010316;1.39e-44;4!UBERON:0005291;1.39e-44;4!UBERON:0001905;7.33e-41;2!UBERON:0002757;7.33e-41;2!UBERON:0010134;7.33e-41;2!UBERON:0005408;7.33e-41;2!UBERON:0001899;7.33e-41;2!UBERON:0002050;7.52e-36;5!UBERON:0005423;7.52e-36;5!UBERON:0002037;1.25e-30;6!UBERON:0003296;5.17e-21;4!UBERON:0010133;5.17e-21;4!UBERON:0002784;5.17e-21;4!UBERON:0002680;1.09e-20;9!UBERON:0001895;1.09e-20;9!UBERON:0004733;1.06e-15;12!UBERON:0002028;1.06e-15;12!UBERON:0004732;1.51e-14;13!UBERON:0001894;1.89e-12;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.99e-41,2;UBERON:0002757,5.99e-41,2;UBERON:0010134,5.99e-41,2;UBERON:0005408,5.99e-41,2;UBERON:0001899,5.99e-41,2;UBERON:0002037,1.38e-30,6;UBERON:0006215,1.38e-30,6;UBERON:0003296,4.68e-21,4;UBERON:0010133,4.68e-21,4;UBERON:0002784,4.68e-21,4;UBERON:0002680,1.16e-20,9;UBERON:0001895,1.16e-20,9;UBERON:0010092,1.16e-20,9;UBERON:0004733,1.11e-15,12;UBERON:0002028,1.11e-15,12;UBERON:0007277,1.11e-15,12;UBERON:0004732,1.58e-14,13;UBERON:0002346,2.66e-14,86;UBERON:0003076,1.11e-12,15;UBERON:0003057,1.11e-12,15;UBERON:0001894,1.78e-12,7;UBERON:0006222,1.78e-12,7;UBERON:0000073,2.04e-09,53;UBERON:0002616,2.04e-09,53;UBERON:0001049,6.33e-09,56;UBERON:0005068,6.33e-09,56;UBERON:0006241,6.33e-09,56;UBERON:0007135,6.33e-09,56;UBERON:0000955,2.82e-07,68;UBERON:0006238,2.82e-07,68;UBERON:0004121,6.15e-07,171;UBERON:0000924,6.15e-07,171;UBERON:0006601,6.15e-07,171 | |||
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| ||
|short_description=p13@KIAA1456 | |short_description=p13@KIAA1456 | ||
}} | }} |
Latest revision as of 05:02, 16 September 2015
Short description: | p13@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA1456_5end |
Coexpression cluster: | C2916_pineal_neuroectodermal_cerebellum_small_neuroepithelioma_thyroid_neuroblastoma |
Association with transcript: | 440bp_to_ENST00000528753_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.99e-41 | 2 |
regional part of epithalamus | 5.99e-41 | 2 |
secretory circumventricular organ | 5.99e-41 | 2 |
circumventricular organ | 5.99e-41 | 2 |
epithalamus | 5.99e-41 | 2 |
cerebellum | 1.38e-30 | 6 |
rhombic lip | 1.38e-30 | 6 |
gland of diencephalon | 4.68e-21 | 4 |
neuroendocrine gland | 4.68e-21 | 4 |
regional part of diencephalon | 4.68e-21 | 4 |
regional part of metencephalon | 1.16e-20 | 9 |
metencephalon | 1.16e-20 | 9 |
future metencephalon | 1.16e-20 | 9 |
segmental subdivision of hindbrain | 1.11e-15 | 12 |
hindbrain | 1.11e-15 | 12 |
presumptive hindbrain | 1.11e-15 | 12 |
segmental subdivision of nervous system | 1.58e-14 | 13 |
neurectoderm | 2.66e-14 | 86 |
posterior neural tube | 1.11e-12 | 15 |
chordal neural plate | 1.11e-12 | 15 |
diencephalon | 1.78e-12 | 7 |
future diencephalon | 1.78e-12 | 7 |
regional part of nervous system | 2.04e-09 | 53 |
regional part of brain | 2.04e-09 | 53 |
neural tube | 6.33e-09 | 56 |
neural rod | 6.33e-09 | 56 |
future spinal cord | 6.33e-09 | 56 |
neural keel | 6.33e-09 | 56 |
brain | 2.82e-07 | 68 |
future brain | 2.82e-07 | 68 |
ectoderm-derived structure | 6.15e-07 | 171 |
ectoderm | 6.15e-07 | 171 |
presumptive ectoderm | 6.15e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.47e-18 | 10 |
germ cell and embryonal cancer | 1.08e-08 | 22 |
germ cell cancer | 1.08e-08 | 22 |