FFCP PHASE1:Hg19::chr8:12809321..12809334,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=170bp_to_ENST00000528753_5end | |||
|cluster_id=chr8:12809321..12809334,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_9_at_KIAA1456_5end | |||
|id=chr8:12809321..12809334,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.82e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.19e-09;5 | |||
|ontology_enrichment_disease=DOID:171!5.78e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.42e-36;10!DOID:3095;2.80e-16;22!DOID:2994;2.80e-16;22!DOID:169;9.26e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.75e-36,10;DOID:3095,2.92e-16,22;DOID:2994,2.92e-16,22;DOID:169,9.58e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.78e-18!94;UBERON:0001016!7.78e-18!94;UBERON:0005743!8.90e-18!86;UBERON:0001017!1.15e-17!82;UBERON:0000955!1.31e-16!69;UBERON:0006238!1.31e-16!69;UBERON:0000924!2.46e-16!173;UBERON:0006601!2.46e-16!173;UBERON:0002346!2.88e-16!90;UBERON:0001049!3.90e-16!57;UBERON:0005068!3.90e-16!57;UBERON:0006241!3.90e-16!57;UBERON:0007135!3.90e-16!57;UBERON:0002616!2.38e-15!59;UBERON:0000153!2.13e-14!129;UBERON:0007811!2.13e-14!129;UBERON:0000033!1.03e-13!123;UBERON:0004121!4.09e-13!169;UBERON:0002780!2.25e-12!41;UBERON:0001890!2.25e-12!41;UBERON:0006240!2.25e-12!41;UBERON:0003075!2.73e-12!86;UBERON:0007284!2.73e-12!86;UBERON:0003080!5.77e-12!42;UBERON:0001893!1.15e-10!34;UBERON:0007023!1.63e-10!115;UBERON:0003056!8.07e-10!61;UBERON:0002791!1.00e-09!33;UBERON:0002020!3.18e-09!34;UBERON:0003528!3.18e-09!34;UBERON:0001869!1.07e-08!32;UBERON:0004733!3.76e-07!12;UBERON:0002028!3.76e-07!12;UBERON:0007277!3.76e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.16e-41;4!UBERON:0000923;8.16e-41;4!UBERON:0010316;8.16e-41;4!UBERON:0005291;8.16e-41;4!UBERON:0002050;9.78e-33;5!UBERON:0005423;9.78e-33;5!UBERON:0001905;1.25e-21;2!UBERON:0002757;1.25e-21;2!UBERON:0010134;1.25e-21;2!UBERON:0005408;1.25e-21;2!UBERON:0001899;1.25e-21;2!UBERON:0003296;2.68e-11;4!UBERON:0010133;2.68e-11;4!UBERON:0002784;2.68e-11;4!UBERON:0000013;3.82e-09;5!UBERON:0002410;3.82e-09;5!UBERON:0002046;6.19e-09;5!UBERON:0001894;8.13e-07;7!UBERON:0002368;9.05e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.25e-21,2;UBERON:0002757,1.25e-21,2;UBERON:0010134,1.25e-21,2;UBERON:0005408,1.25e-21,2;UBERON:0001899,1.25e-21,2;UBERON:0003296,2.68e-11,4;UBERON:0010133,2.68e-11,4;UBERON:0002784,2.68e-11,4;UBERON:0000013,3.98e-09,5;UBERON:0002410,3.98e-09,5;UBERON:0002046,6.70e-09,5;UBERON:0004117,6.70e-09,5;UBERON:0007689,6.70e-09,5;UBERON:0007123,6.70e-09,5;UBERON:0003091,6.70e-09,5;UBERON:0002346,3.36e-08,86;UBERON:0002368,4.52e-07,35;UBERON:0001894,8.13e-07,7;UBERON:0006222,8.13e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.89694817844431,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0,0.0920498986422993,0,1.06502877754984,0.302256294682921,1.18692414617341,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.788512075169673,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,2.62444152044929,0.347249989866585,0,0.361789315876224,0,2.65390223834939,0.886642856860642,0.219385397153973,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22021956690538,0.18628920882415,0,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.560712313821,0,2.0367903594483,10.4161710849825,16.2355851179293,11.7315432774381,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,4.57265235335014,0,5.89272019466115,41.0266141106965,0,0,0.79832133146375,0,0,0.203909198930495,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.929195074296532,3.79232668158544,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,4.57586782871147,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0.476128862927481,0,0.0620747142958579,0,3.56424086357723,2.02117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@KIAA1456 | |||
}} |
Latest revision as of 04:58, 16 September 2015
Short description: | p9@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KIAA1456_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 170bp_to_ENST00000528753_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.25e-21 | 2 |
regional part of epithalamus | 1.25e-21 | 2 |
secretory circumventricular organ | 1.25e-21 | 2 |
circumventricular organ | 1.25e-21 | 2 |
epithalamus | 1.25e-21 | 2 |
gland of diencephalon | 2.68e-11 | 4 |
neuroendocrine gland | 2.68e-11 | 4 |
regional part of diencephalon | 2.68e-11 | 4 |
sympathetic nervous system | 3.98e-09 | 5 |
autonomic nervous system | 3.98e-09 | 5 |
thyroid gland | 6.70e-09 | 5 |
pharyngeal pouch | 6.70e-09 | 5 |
thyroid diverticulum | 6.70e-09 | 5 |
pharyngeal pouch 2 | 6.70e-09 | 5 |
thyroid primordium | 6.70e-09 | 5 |
neurectoderm | 3.36e-08 | 86 |
endocrine gland | 4.52e-07 | 35 |
diencephalon | 8.13e-07 | 7 |
future diencephalon | 8.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.75e-36 | 10 |
germ cell and embryonal cancer | 2.92e-16 | 22 |
germ cell cancer | 2.92e-16 | 22 |
neuroendocrine tumor | 9.58e-08 | 6 |