FFCP PHASE1:Hg19::chr12:108954933..108954957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9733 | |EntrezGene=9733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16860 | |HGNC=16860 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMI4,B7ZKM0,F8VV04,F8W667 | |UniProt=E7EMI4,B7ZKM0,F8VV04,F8W667 | ||
|association_with_transcript=0bp_to_ENST00000412617,ENST00000431469,ENST00000546728,ENST00000546815,ENST00000547528,ENST00000552221_5end | |association_with_transcript=0bp_to_ENST00000412617,ENST00000431469,ENST00000546728,ENST00000546815,ENST00000547528,ENST00000552221_5end | ||
|cluster_id=chr12:108954933..108954957,- | |||
|description=CAGE_peak_1_at_SART3_5end | |description=CAGE_peak_1_at_SART3_5end | ||
|id=chr12:108954933..108954957,- | |id=chr12:108954933..108954957,- | ||
|ontology_enrichment_celltype=CL:0000037!2.68e-13!172;CL:0000566!2.68e-13!172;CL:0002032!4.16e-13!165;CL:0000837!4.16e-13!165;CL:0000988!1.09e-11!182;CL:0000542!2.23e-09!53;CL:0000051!2.23e-09!53;CL:0000838!2.74e-09!52;CL:0000738!3.53e-07!140;CL:0000945!5.43e-07!24;CL:0000826!5.43e-07!24 | |ontology_enrichment_celltype=CL:0000037!2.68e-13!172;CL:0000566!2.68e-13!172;CL:0002032!4.16e-13!165;CL:0000837!4.16e-13!165;CL:0000988!1.09e-11!182;CL:0000542!2.23e-09!53;CL:0000051!2.23e-09!53;CL:0000838!2.74e-09!52;CL:0000738!3.53e-07!140;CL:0000945!5.43e-07!24;CL:0000826!5.43e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.42e-07;24 | |ontology_enrichment_celltype_v019=CL:0000945;6.42e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.01e-13,168;CL:0002032,3.07e-13,161;CL:0000837,3.07e-13,161;CL:0000988,3.28e-12,177;CL:0000542,2.23e-09,53;CL:0000051,2.23e-09,53;CL:0000838,2.74e-09,52;CL:0000738,3.02e-07,136;CL:0000945,5.43e-07,24;CL:0000826,5.43e-07,24;CL:0002031,9.79e-07,120 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.01e-16!235;DOID:14566!1.21e-15!239;DOID:0050687!1.11e-12!143;DOID:305!5.90e-09!106;DOID:2531!1.50e-08!51;DOID:0060083!1.50e-08!51;DOID:1240!1.63e-07!39;DOID:3095!1.69e-07!22;DOID:2994!1.69e-07!22;DOID:0050686!2.33e-07!137;DOID:8692!2.99e-07!31 | |ontology_enrichment_disease=DOID:162!3.01e-16!235;DOID:14566!1.21e-15!239;DOID:0050687!1.11e-12!143;DOID:305!5.90e-09!106;DOID:2531!1.50e-08!51;DOID:0060083!1.50e-08!51;DOID:1240!1.63e-07!39;DOID:3095!1.69e-07!22;DOID:2994!1.69e-07!22;DOID:0050686!2.33e-07!137;DOID:8692!2.99e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.87e-07;22!DOID:2994;1.87e-07;22!DOID:8692;4.22e-07;31 | |ontology_enrichment_disease_v019=DOID:3095;1.87e-07;22!DOID:2994;1.87e-07;22!DOID:8692;4.22e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,3.01e-16,235;DOID:14566,1.21e-15,239;DOID:0050687,1.11e-12,143;DOID:305,5.90e-09,106;DOID:2531,1.50e-08,51;DOID:0060083,1.50e-08,51;DOID:1240,1.63e-07,39;DOID:3095,1.69e-07,22;DOID:2994,1.69e-07,22;DOID:0050686,2.33e-07,137;DOID:8692,2.99e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-09!115;UBERON:0000073!1.03e-08!94;UBERON:0001016!1.03e-08!94;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0002780!1.37e-07!41;UBERON:0001890!1.37e-07!41;UBERON:0006240!1.37e-07!41;UBERON:0003080!2.58e-07!42;UBERON:0001017!5.50e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-09!115;UBERON:0000073!1.03e-08!94;UBERON:0001016!1.03e-08!94;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0002780!1.37e-07!41;UBERON:0001890!1.37e-07!41;UBERON:0006240!1.37e-07!41;UBERON:0003080!2.58e-07!42;UBERON:0001017!5.50e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.28e-09,89;UBERON:0007023,4.51e-09,114;UBERON:0001049,7.29e-08,56;UBERON:0005068,7.29e-08,56;UBERON:0006241,7.29e-08,56;UBERON:0007135,7.29e-08,56;UBERON:0000073,8.29e-08,53;UBERON:0002616,8.29e-08,53;UBERON:0002780,1.37e-07,41;UBERON:0001890,1.37e-07,41;UBERON:0003080,1.37e-07,41;UBERON:0006240,1.37e-07,41;UBERON:0001017,3.80e-07,81 | |||
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| ||
|short_description=p1@SART3 | |short_description=p1@SART3 | ||
}} | }} |
Latest revision as of 04:56, 16 September 2015
Short description: | p1@SART3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SART3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412617, ENST00000431469, ENST00000546728, ENST00000546815, ENST00000547528, ENST00000552221_5end |
EntrezGene: | SART3 |
HGNC: | 16860 |
UniProt: | E7EMI4B7ZKM0F8VV04F8W667 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.01e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.07e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.07e-13 | 161 |
hematopoietic cell | 3.28e-12 | 177 |
lymphocyte | 2.23e-09 | 53 |
common lymphoid progenitor | 2.23e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.74e-09 | 52 |
leukocyte | 3.02e-07 | 136 |
lymphocyte of B lineage | 5.43e-07 | 24 |
pro-B cell | 5.43e-07 | 24 |
hematopoietic lineage restricted progenitor cell | 9.79e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.28e-09 | 89 |
adult organism | 4.51e-09 | 114 |
neural tube | 7.29e-08 | 56 |
neural rod | 7.29e-08 | 56 |
future spinal cord | 7.29e-08 | 56 |
neural keel | 7.29e-08 | 56 |
regional part of nervous system | 8.29e-08 | 53 |
regional part of brain | 8.29e-08 | 53 |
regional part of forebrain | 1.37e-07 | 41 |
forebrain | 1.37e-07 | 41 |
anterior neural tube | 1.37e-07 | 41 |
future forebrain | 1.37e-07 | 41 |
central nervous system | 3.80e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.01e-16 | 235 |
disease of cellular proliferation | 1.21e-15 | 239 |
cell type cancer | 1.11e-12 | 143 |
carcinoma | 5.90e-09 | 106 |
hematologic cancer | 1.50e-08 | 51 |
immune system cancer | 1.50e-08 | 51 |
leukemia | 1.63e-07 | 39 |
germ cell and embryonal cancer | 1.69e-07 | 22 |
germ cell cancer | 1.69e-07 | 22 |
organ system cancer | 2.33e-07 | 137 |
myeloid leukemia | 2.99e-07 | 31 |