FFCP PHASE1:Hg19::chr8:12808941..12808953,+: Difference between revisions
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|id=chr8:12808941..12808953,+
|short_description=p18@KIAA1456
|description=CAGE_peak_18_at_KIAA1456_5end
|association_with_transcript=-197bp_to_ENST00000528753_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000528753_5end | |||
|cluster_id=chr8:12808941..12808953,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_18_at_KIAA1456_5end | |||
|id=chr8:12808941..12808953,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.96e-21;2!CL:0000333;3.10e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.28e-53;3 | |||
|ontology_enrichment_disease=DOID:171!3.99e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:3193;5.15e-21;2!DOID:962;5.15e-21;2!DOID:1192;1.71e-14;3!DOID:169;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,4.66e-21,2;DOID:962,4.66e-21,2;DOID:1192,1.60e-14,3;DOID:169,6.34e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.82e-27;6!UBERON:0001905;5.15e-21;2!UBERON:0003714;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0002680;1.03e-18;9!UBERON:0001895;1.03e-18;9!UBERON:0004733;2.57e-14;12!UBERON:0002028;2.57e-14;12!UBERON:0004732;2.68e-13;13!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0000013;3.10e-09;5!UBERON:0002410;3.10e-09;5!UBERON:0001016;4.62e-07;83!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.82e-27,6;UBERON:0006215,1.82e-27,6;UBERON:0003714,4.66e-21,2;UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0002680,1.03e-18,9;UBERON:0001895,1.03e-18,9;UBERON:0010092,1.03e-18,9;UBERON:0004733,2.57e-14,12;UBERON:0002028,2.57e-14,12;UBERON:0007277,2.57e-14,12;UBERON:0004732,2.68e-13,13;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15;UBERON:0001016,2.13e-11,89;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000013,2.97e-09,5;UBERON:0002410,2.97e-09,5;UBERON:0001017,2.64e-08,81;UBERON:0000073,2.03e-07,53;UBERON:0002616,2.03e-07,53;UBERON:0001049,4.58e-07,56;UBERON:0005068,4.58e-07,56;UBERON:0006241,4.58e-07,56;UBERON:0007135,4.58e-07,56;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
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| ||
|short_description=p18@KIAA1456 | |||
}} | }} |
Latest revision as of 04:53, 16 September 2015
Short description: | p18@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_KIAA1456_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -197bp_to_ENST00000528753_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.82e-27 | 6 |
rhombic lip | 1.82e-27 | 6 |
neural tissue | 4.66e-21 | 2 |
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
regional part of metencephalon | 1.03e-18 | 9 |
metencephalon | 1.03e-18 | 9 |
future metencephalon | 1.03e-18 | 9 |
segmental subdivision of hindbrain | 2.57e-14 | 12 |
hindbrain | 2.57e-14 | 12 |
presumptive hindbrain | 2.57e-14 | 12 |
segmental subdivision of nervous system | 2.68e-13 | 13 |
posterior neural tube | 1.15e-11 | 15 |
chordal neural plate | 1.15e-11 | 15 |
nervous system | 2.13e-11 | 89 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
sympathetic nervous system | 2.97e-09 | 5 |
autonomic nervous system | 2.97e-09 | 5 |
central nervous system | 2.64e-08 | 81 |
regional part of nervous system | 2.03e-07 | 53 |
regional part of brain | 2.03e-07 | 53 |
neural tube | 4.58e-07 | 56 |
neural rod | 4.58e-07 | 56 |
future spinal cord | 4.58e-07 | 56 |
neural keel | 4.58e-07 | 56 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.66e-21 | 2 |
neurofibroma | 4.66e-21 | 2 |
peripheral nervous system neoplasm | 1.60e-14 | 3 |
neuroendocrine tumor | 6.34e-08 | 6 |