FFCP PHASE1:Hg19::chr8:127567083..127567087,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157638 | |EntrezGene=157638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24166 | |HGNC=24166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-248bp_to_BC033717_5end | |association_with_transcript=-248bp_to_BC033717_5end | ||
|cluster_id=chr8:127567083..127567087,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_6_at_FAM84B_5end | |description=CAGE_peak_6_at_FAM84B_5end | ||
|id=chr8:127567083..127567087,- | |id=chr8:127567083..127567087,- | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-20!254 | |ontology_enrichment_celltype=CL:0000066!1.94e-20!254 | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.11e-21;3!CL:0000149;6.60e-16;4!CL:0000064;1.94e-09;3!CL:0000067;1.94e-09;3!CL:0005012;1.94e-09;3!CL:0002304;1.94e-09;3!CL:0000313;4.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.94e-21,3;CL:0000149,8.29e-16,4;CL:0000064,2.85e-09,3;CL:0000067,2.85e-09,3;CL:0005012,2.85e-09,3;CL:0002304,2.85e-09,3;CL:0000313,3.80e-08,1;CL:0000066,3.80e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.24e-14!143;DOID:305!5.38e-14!106;DOID:162!4.36e-09!235;DOID:14566!2.07e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:299;7.16e-09;25!DOID:2152;4.20e-08;1!DOID:5093;2.75e-07;4!DOID:1612;2.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.25e-09,25;DOID:2152,3.80e-08,1;DOID:5093,2.13e-07,4;DOID:1612,2.13e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.03e-08!11 | |ontology_enrichment_uberon=UBERON:0007625!1.03e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;5.11e-21;3!UBERON:0001782;5.11e-21;3!UBERON:0007625;5.19e-21;11!UBERON:0000966;7.88e-13;5!UBERON:0005388;7.88e-13;5!UBERON:0001802;7.88e-13;5!UBERON:0000019;5.98e-12;19!UBERON:0000047;5.98e-12;19!UBERON:0004088;5.98e-12;19!UBERON:0010230;5.98e-12;19!UBERON:0000970;2.52e-11;20!UBERON:0002104;9.25e-11;21!UBERON:0001456;9.25e-11;21!UBERON:0000020;8.90e-10;23!UBERON:0001778;1.94e-09;3!UBERON:0001775;1.94e-09;3!UBERON:0001032;2.40e-09;24!UBERON:0004456;2.40e-09;24!UBERON:0004911;4.20e-08;1!UBERON:0001736;1.07e-07;1!UBERON:0001052;1.42e-07;4!UBERON:0000488;2.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.91e-21,11;UBERON:0001782,6.94e-21,3;UBERON:0005424,6.94e-21,3;UBERON:0001781,8.29e-16,4;UBERON:0000019,2.93e-11,20;UBERON:0000047,2.93e-11,20;UBERON:0010312,2.93e-11,20;UBERON:0004088,2.93e-11,20;UBERON:0010230,2.93e-11,20;UBERON:0003072,2.93e-11,20;UBERON:0004128,2.93e-11,20;UBERON:0003071,2.93e-11,20;UBERON:0000966,1.04e-10,6;UBERON:0005388,1.04e-10,6;UBERON:0001802,1.04e-10,6;UBERON:0000970,1.07e-10,21;UBERON:0002104,1.07e-10,21;UBERON:0001456,3.46e-10,22;UBERON:0000020,2.71e-09,24;UBERON:0001032,2.71e-09,24;UBERON:0004456,2.71e-09,24;UBERON:0001778,2.85e-09,3;UBERON:0001775,2.85e-09,3;UBERON:0004911,3.80e-08,1;UBERON:0001736,8.51e-08,1;UBERON:0006298,8.51e-08,1;UBERON:0001052,1.76e-07,4;UBERON:0001444,2.41e-07,49;UBERON:0000488,3.66e-07,4;UBERON:0005085,4.54e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.511450247374121,0,0,0,0,0,0.850813354476611,1.10864698731282,1.22968699970376,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0.530119073285941,0.464775771478074,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.144366447761074,0,0.190254152234598,1.58040879591855,0,0,0,0,0.93733833986777,0,0.141775097242386,0.806026704325635,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.276242966807689,0,0,0,0.902399225814824,1.23224539367064,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0.254876273045038,2.49322802678617,0.223874754722178,0,0,4.10320200186223,2.29610251989794,2.27764876265012,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.495854746082934,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.921482106297696,0,0.281338832821026,0.222617410045812,0,0.211125408127993,0,0,0.251932747854276,0.409074730008619,0,0,0.359473404589307,0.537063524026827,0,0.0986434056369336,0,0,0,0,1.99613798001194,1.30213880542617,0.524759999977174,0.724999575434793,0.227586896570999,0.762760950878299,0.945550727071745,0,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0.23056390438806,0.0897576444097721,0.108647371922008,0.31900115973192,0.183195186803725,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,7.78999103071528,0,0.0884575645033392,0,0,0,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0,0.901940516486955,0.518440956986236,0.664653872707185,1.323967823502,0.313932918407225,1.19472429772959,1.13843818411917,0,0,0.0979923974143777,0.34823682632161,0,0,0,0,0,0.193978032976839,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0.288180834308212,0,0,2.88109595976299,0,0,0.135904206073614,0.313808538937,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0.422401346077626,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0.226624183040251,0,0,0,0.13223260174269,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0.415045904808692,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.489473409012935,0.358177682162975,0.308801447160972,2.63140859494449,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0.559518030877778,0,0,0,0.314531883711793,0,0.678930119816101,0.425149840203366,4.70955904184208,1.67593475391973,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0.548257766857182,0.496211178389294,0.351742488719241,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.590969204419841,1.00108261702862,0,0,1.12108865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| ||
|short_description=p6@FAM84B | |short_description=p6@FAM84B | ||
}} | }} |
Latest revision as of 04:15, 16 September 2015
Short description: | p6@FAM84B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM84B_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | -248bp_to_BC033717_5end |
EntrezGene: | FAM84B |
HGNC: | 24166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.94e-21 | 3 |
visual pigment cell | 8.29e-16 | 4 |
ciliated cell | 2.85e-09 | 3 |
ciliated epithelial cell | 2.85e-09 | 3 |
multi-ciliated epithelial cell | 2.85e-09 | 3 |
non-pigmented ciliary epithelial cell | 2.85e-09 | 3 |
serous secreting cell | 3.80e-08 | 1 |
epithelial cell | 3.80e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 6.91e-21 | 11 |
pigmented layer of retina | 6.94e-21 | 3 |
presumptive retinal pigmented epithelium | 6.94e-21 | 3 |
layer of retina | 8.29e-16 | 4 |
camera-type eye | 2.93e-11 | 20 |
simple eye | 2.93e-11 | 20 |
immature eye | 2.93e-11 | 20 |
ocular region | 2.93e-11 | 20 |
eyeball of camera-type eye | 2.93e-11 | 20 |
optic cup | 2.93e-11 | 20 |
optic vesicle | 2.93e-11 | 20 |
eye primordium | 2.93e-11 | 20 |
retina | 1.04e-10 | 6 |
photoreceptor array | 1.04e-10 | 6 |
posterior segment of eyeball | 1.04e-10 | 6 |
eye | 1.07e-10 | 21 |
visual system | 1.07e-10 | 21 |
face | 3.46e-10 | 22 |
sense organ | 2.71e-09 | 24 |
sensory system | 2.71e-09 | 24 |
entire sense organ system | 2.71e-09 | 24 |
ciliary epithelium | 2.85e-09 | 3 |
ciliary body | 2.85e-09 | 3 |
epithelium of female gonad | 3.80e-08 | 1 |
submandibular gland | 8.51e-08 | 1 |
submandibular gland primordium | 8.51e-08 | 1 |
rectum | 1.76e-07 | 4 |
subdivision of head | 2.41e-07 | 49 |
atypical epithelium | 3.66e-07 | 4 |
ectodermal placode | 4.54e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.25e-09 | 25 |
ovary epithelial cancer | 3.80e-08 | 1 |
thoracic cancer | 2.13e-07 | 4 |
breast cancer | 2.13e-07 | 4 |